Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre13.g566900 Chlamydomonas reinhardtii HOM05D005064 ORTHO05D006611 0.0e+00 3855.4 3112 100.0
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.4e-26 127.9 250 35.6
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 4.0e-26 126.3 254 35.8
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 5.3e-26 125.9 250 35.2
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 5.3e-26 125.9 250 35.2
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 1.2e-25 124.8 275 33.1
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 1.2e-25 124.8 293 33.1
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 3.4e-25 123.2 260 34.2
Medtr0191s0030 Medicago truncatula HOM05D005064 ORTHO05D006611 4.5e-25 122.9 228 34.6
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 5.8e-25 122.5 251 32.7
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 5.8e-25 122.5 249 35.7
Lsat_1_v5_gn_5_149520 Lactuca sativa HOM05D005064 ORTHO05D006611 5.8e-25 122.5 268 34.7
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 5.8e-25 122.5 254 34.3
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 7.6e-25 122.1 251 32.7
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 7.6e-25 122.1 257 35.4
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 7.6e-25 122.1 252 33.7
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 9.9e-25 121.7 228 36.4
C06p17140 Brassica napus HOM05D005064 ORTHO05D006611 9.9e-25 121.7 251 32.7
BolC6t36909H Brassica oleracea HOM05D005064 ORTHO05D006611 9.9e-25 121.7 251 32.7
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 9.9e-25 121.7 275 34.2
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 1.3e-24 121.3 227 37.9
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 1.7e-24 120.9 273 32.6
AUR62030766 Chenopodium quinoa HOM05D005064 ORTHO05D006611 1.7e-24 120.9 228 36.4
Ah.12g059020 Amaranthus hybridus HOM05D005064 ORTHO05D006611 2.2e-24 120.6 227 34.4
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 2.2e-24 120.6 274 31.8
Eucgr.K02953 Eucalyptus grandis HOM05D005064 ORTHO05D006611 2.2e-24 120.6 227 36.6
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 2.2e-24 120.6 274 32.1
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.9e-24 120.2 274 32.1
CDE04G0109 Ceratophyllum demersum HOM05D005064 ORTHO05D006611 2.9e-24 120.2 267 32.2
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 3.8e-24 119.8 249 34.1
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 4.9e-24 119.4 290 33.1
AUR62030526 Chenopodium quinoa HOM05D005064 ORTHO05D006611 4.9e-24 119.4 228 36.4
HanXRQChr15g0486851 Helianthus annuus HOM05D005064 ORTHO05D006611 4.9e-24 119.4 250 34.8
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 4.9e-24 119.4 228 35.1
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 8.4e-24 118.6 228 34.2
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 1.1e-23 118.2 252 32.5
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 1.1e-23 118.2 275 33.8
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.4e-23 117.9 247 34.0
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 1.4e-23 117.9 227 35.7
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 1.9e-23 117.5 227 35.2
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 1.9e-23 117.5 255 34.1
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 1.9e-23 117.5 475 25.7
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 2.4e-23 117.1 258 32.2
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 2.4e-23 117.1 293 30.7
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 2.4e-23 117.1 270 31.5
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 4.2e-23 116.3 252 33.3
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 4.2e-23 116.3 252 33.7
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 4.2e-23 116.3 228 33.8
THA.LOC104798645 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 4.2e-23 116.3 447 26.4
SEGI_27109 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 5.4e-23 115.9 263 33.5
SEGI_30642 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 5.4e-23 115.9 263 33.5
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 5.4e-23 115.9 275 33.5
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 7.1e-23 115.5 252 32.9
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 7.1e-23 115.5 252 33.7
Mapoly0045s0096 Marchantia polymorpha HOM05D005064 ORTHO05D006611 7.1e-23 115.5 263 34.6
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 7.1e-23 115.5 259 35.1
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 7.1e-23 115.5 255 34.5
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 1.2e-22 114.8 279 32.6
CBR_g19766 Chara braunii HOM05D005064 ORTHO05D000048 1.2e-22 114.8 297 31.0
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 1.2e-22 114.8 276 32.6
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 1.2e-22 114.8 201 36.3
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 1.2e-22 114.8 250 35.6
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 2.1e-22 114.0 229 34.1
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 2.1e-22 114.0 228 32.9
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 2.1e-22 114.0 268 33.2
Sc07g0001460 Simmondsia chinensis HOM05D005064 ORTHO05D006611 2.1e-22 114.0 237 34.6
AagrBONN_evm.TU.Sc2ySwM_362.1800 Anthoceros agrestis HOM05D005064 ORTHO05D006611 2.7e-22 113.6 229 33.6
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 2.7e-22 113.6 238 35.7
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 3.5e-22 113.2 277 31.4
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 4.6e-22 112.8 247 33.2
Phvul.006G005800 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 6.0e-22 112.5 237 33.3
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 7.9e-22 112.1 228 34.2
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 1.0e-21 111.7 238 34.9
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 1.0e-21 111.7 265 34.3
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 1.3e-21 111.3 433 27.9
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 1.8e-21 110.9 261 32.2
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 1.8e-21 110.9 228 33.8
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.8e-21 110.9 247 32.8
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 1.8e-21 110.9 433 27.9
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 2.3e-21 110.5 227 33.5
Solyc02g050200.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 2.3e-21 110.5 254 33.9
HPP92_013858 Vanilla planifolia HOM05D005064 ORTHO05D006611 2.3e-21 110.5 249 31.3
Oeu026978.1 Olea europaea HOM05D005064 ORTHO05D006611 3.9e-21 109.8 250 31.6
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 3.9e-21 109.8 237 32.5
HPP92_013842 Vanilla planifolia HOM05D005064 ORTHO05D006611 5.1e-21 109.4 249 30.9
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 6.7e-21 109.0 254 33.5
THA.LOC104816179 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 6.7e-21 109.0 447 26.8
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 1.1e-20 108.2 257 29.6
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 1.5e-20 107.8 227 32.2
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 1.9e-20 107.5 228 33.3
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 1.9e-20 107.5 255 32.2
MSTRG.18977 Avicennia marina HOM05D005064 ORTHO05D006611 3.3e-20 106.7 287 31.0
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 3.3e-20 106.7 263 33.8
Migut.J00101 Erythranthe guttata HOM05D005064 ORTHO05D006611 7.4e-20 105.5 271 31.7
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 1.3e-19 104.8 240 31.7
BolC3t12595H Brassica oleracea HOM05D005064 ORTHO05D006611 1.3e-19 104.8 297 31.0
Os01g0164800 Oryza sativa ssp. japonica HOM05D005064 ORTHO05D006611 2.1e-19 104.0 230 30.9
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 2.8e-19 103.6 238 34.0
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 3.6e-19 103.2 284 30.3
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 3.6e-19 103.2 272 32.0
SGA_v2.0_scaffold85G26687 Striga asiatica HOM05D005064 ORTHO05D006611 6.2e-19 102.4 266 31.2
Nitab4.5_0010437g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 8.1e-19 102.1 426 27.0
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 1.1e-18 101.7 417 27.1
Zm00001eb419130 Zea mays HOM05D005064 ORTHO05D006611 1.4e-18 101.3 231 31.6
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 3.1e-18 100.1 227 32.2
MCO02G178 Micromonas commoda HOM05D005064 ORTHO05D006611 3.1e-18 100.1 289 31.1
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 9.9e-17 95.1 251 29.5
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 2.9e-16 93.6 274 29.9
FAN28G2142 Fragaria x ananassa HOM05D005064 ORTHO05D006611 2.1e-14 87.4 247 30.8
Peaxi162Scf00744g00354 Petunia axillaris HOM05D005064 ORTHO05D006611 1.3e-13 84.7 291 27.5
SHI12869 Sapria himalayana HOM05D005064 ORTHO05D006611 1.3e-11 78.2 248 31.0
SalBow5G0042 Salvia bowleyana HOM05D005064 ORTHO05D006611 2.8e-11 77.0 285 29.1
SalBow5G1296 Salvia bowleyana HOM05D005064 ORTHO05D006611 2.8e-11 77.0 285 29.1
Medtr6g033115 Medicago truncatula HOM05D005064 ORTHO05D006611 3.7e-11 76.6 204 30.4
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 9.0e-10 72.0 116 39.7
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 1.0e-08 68.6 215 27.4


User provided reference genes

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