Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 6.6e-197 690.6 382 100.0
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 2.6e-28 130.6 320 31.9
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 1.9e-26 124.4 366 27.9
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 2.1e-25 120.9 415 28.0
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 2.3e-24 117.5 337 28.8
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 3.9e-24 116.7 313 28.8
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 5.7e-23 112.8 314 29.6
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 8.4e-19 99.0 335 27.2
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 3.5e-17 93.6 228 30.7
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 6.1e-17 92.8 340 25.9
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 6.1e-17 92.8 318 26.4
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.0e-16 92.0 335 26.3
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.0e-16 92.0 338 26.6
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 2.3e-16 90.9 321 28.3
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 3.9e-16 90.1 362 25.7
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 3.9e-16 90.1 312 25.3
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 3.9e-16 90.1 352 27.6
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 3.9e-16 90.1 338 27.5
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 8.7e-16 89.0 338 26.9
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.1e-15 88.6 337 26.4
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 1.1e-15 88.6 339 26.3
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.1e-15 88.6 228 30.3
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.5e-15 88.2 315 26.7
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 1.9e-15 87.8 314 26.4
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 2.5e-15 87.4 218 29.4
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 3.3e-15 87.0 316 27.2
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 3.3e-15 87.0 298 32.2
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 4.3e-15 86.7 317 25.6
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 5.7e-15 86.3 312 26.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 7.4e-15 85.9 228 28.9
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 9.7e-15 85.5 334 24.9
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 9.7e-15 85.5 228 29.8
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.3e-14 85.1 312 25.3
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.3e-14 85.1 239 28.9
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 1.3e-14 85.1 388 26.3
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.6e-14 84.7 318 26.4
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 2.2e-14 84.3 312 26.0
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 2.2e-14 84.3 317 25.9
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 2.2e-14 84.3 336 25.6
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.8e-14 84.0 218 29.8
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 2.8e-14 84.0 315 26.7
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 4.8e-14 83.2 317 25.6
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 6.3e-14 82.8 313 26.5
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 6.3e-14 82.8 313 26.5
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 8.2e-14 82.4 312 25.6
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 8.2e-14 82.4 317 25.6
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 8.2e-14 82.4 318 24.8
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.1e-13 82.0 326 24.8
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 1.1e-13 82.0 317 24.3
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 1.4e-13 81.6 318 26.1
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 1.4e-13 81.6 349 26.4
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 1.8e-13 81.3 335 24.2
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 1.8e-13 81.3 312 24.7
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 1.8e-13 81.3 335 25.7
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 2.4e-13 80.9 315 26.7
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 2.4e-13 80.9 218 28.9
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 2.4e-13 80.9 315 26.0
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 2.4e-13 80.9 327 25.7
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 4.1e-13 80.1 319 27.0
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 5.3e-13 79.7 315 26.3
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 5.3e-13 79.7 309 25.6
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 6.9e-13 79.3 360 24.4
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 9.0e-13 79.0 360 24.4
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 9.0e-13 79.0 218 29.8
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.5e-12 78.2 211 28.9
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.5e-12 78.2 223 27.8
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.4e-12 77.0 216 29.2
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 3.4e-12 77.0 331 25.7
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 4.5e-12 76.6 326 23.6
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 5.0e-11 73.2 337 25.5
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.0e-11 73.2 337 25.5
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 8.5e-11 72.4 319 24.8
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 1.4e-10 71.6 308 24.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 3.2e-10 70.5 337 24.9
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.7e-09 67.4 314 25.2
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 3.6e-09 67.0 249 28.5
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.1e-09 66.2 230 27.0
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.4e-08 65.1 316 25.3
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.8e-08 64.7 192 27.6
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.4e-07 59.3 201 26.9
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 6.3e-06 56.2 132 33.3


User provided reference genes

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