Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g170350 Chlamydomonas reinhardtii HOM05D000992 ORTHO05D001928 2.8e-234 815.1 458 100.0
SalBow1G5429 Salvia bowleyana HOM05D000992 ORTHO05D001928 1.5e-17 95.1 393 27.0
Actinidia18442 Actinidia chinensis HOM05D000992 ORTHO05D001928 1.6e-16 91.7 419 25.5
Migut.E00433 Erythranthe guttata HOM05D000992 ORTHO05D001928 2.1e-16 91.3 404 26.2
SalBow8G2514 Salvia bowleyana HOM05D000992 ORTHO05D001928 8.0e-16 89.4 394 26.6
SalBow7G0291 Salvia bowleyana HOM05D000992 ORTHO05D001928 1.0e-15 89.0 395 25.6
THA.LOC104805068 Tarenaya hassleriana HOM05D000992 ORTHO05D001928 8.9e-15 85.9 424 25.7
FvH4_4g32580 Fragaria vesca HOM05D000992 ORTHO05D001928 1.5e-14 85.1 396 25.0
PGR119G0308 Punica granatum HOM05D000992 ORTHO05D001928 1.5e-14 85.1 440 26.4
FAN07G2064 Fragaria x ananassa HOM05D000992 ORTHO05D001928 2.6e-14 84.3 396 24.7
HanXRQChr11g0320951 Helianthus annuus HOM05D000992 ORTHO05D001928 3.4e-14 84.0 361 27.4
Atru.chr11.373 Acer truncatum HOM05D000992 ORTHO05D001928 7.5e-14 82.8 365 25.2
Nitab4.5_0007845g0030 Nicotiana tabacum HOM05D000992 ORTHO05D001928 9.8e-14 82.4 406 24.9
unitig_22.g5587 Utricularia gibba HOM05D000992 ORTHO05D001928 9.8e-14 82.4 387 25.8
CSS0018449 Camellia sinensis var. sinensis HOM05D000992 ORTHO05D001928 1.3e-13 82.0 423 26.5
Nitab4.5_0000441g0190 Nicotiana tabacum HOM05D000992 ORTHO05D001928 1.3e-13 82.0 405 25.4
FAN17G2843 Fragaria x ananassa HOM05D000992 ORTHO05D001928 3.7e-13 80.5 396 24.2
CiPaw.06G011200 Carya illinoinensis HOM05D000992 ORTHO05D001928 6.4e-13 79.7 430 25.3
FAN12G1857 Fragaria x ananassa HOM05D000992 ORTHO05D001928 6.4e-13 79.7 396 24.5
Gohir.A07G097700 Gossypium hirsutum HOM05D000992 ORTHO05D001928 1.1e-12 79.0 425 24.5
MD16G1027100 Malus domestica HOM05D000992 ORTHO05D001928 1.1e-12 79.0 360 26.9
RcHm_v2.0_Chr4g0441451 Rosa chinensis HOM05D000992 ORTHO05D001928 1.1e-12 79.0 439 23.7
PGSC0003DMG400006156 Solanum tuberosum HOM05D000992 ORTHO05D001928 1.1e-12 79.0 406 24.6
ClCG11G001240 Citrullus lanatus HOM05D000992 ORTHO05D001928 1.9e-12 78.2 426 24.9
Peaxi162Scf00776g00324 Petunia axillaris HOM05D000992 ORTHO05D001928 3.2e-12 77.4 416 24.0
Gorai.001G109900 Gossypium raimondii HOM05D000992 ORTHO05D001928 4.1e-12 77.0 425 24.5
Sed0025111 Sechium edule HOM05D000992 ORTHO05D001928 4.1e-12 77.0 365 25.5
BolC2t11036H Brassica oleracea HOM05D000992 ORTHO05D001928 7.0e-12 76.3 413 24.2
Dinv07657 Davidia involucrata HOM05D000269 ORTHO05D000216 7.0e-12 76.3 427 25.8
ECA232G2145 Erigeron canadensis HOM05D000992 ORTHO05D001928 7.0e-12 76.3 361 26.0
Ah.05g177390 Amaranthus hybridus HOM05D000992 ORTHO05D001928 1.2e-11 75.5 404 25.2
C02p49570 Brassica napus HOM05D000992 ORTHO05D001928 2.0e-11 74.7 414 22.9
Duzib248G0828 Durio zibethinus HOM05D000992 ORTHO05D001928 2.0e-11 74.7 370 25.7
Sabra08G0098900 Salix brachista HOM05D000992 ORTHO05D001928 2.0e-11 74.7 370 25.1
Aa31LG2G8460 Aethionema arabicum HOM05D000992 ORTHO05D001928 2.7e-11 74.3 358 25.4
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 2.7e-11 74.3 411 27.7
MCO03G131 Micromonas commoda HOM05D000992 ORTHO05D001928 2.7e-11 74.3 407 23.6
CANSAT64G2027 Cannabis sativa HOM05D000992 ORTHO05D001928 3.5e-11 73.9 257 28.4
Gohir.D07G102000 Gossypium hirsutum HOM05D000992 ORTHO05D001928 3.5e-11 73.9 425 24.2
Mapoly0068s0040 Marchantia polymorpha HOM05D000992 ORTHO05D001928 4.6e-11 73.6 397 23.9
CsaV3_5G013310 Cucumis sativus L. HOM05D000992 ORTHO05D001928 6.0e-11 73.2 439 24.1
Sopen07g024400 Solanum pennellii HOM05D000992 ORTHO05D001928 6.0e-11 73.2 357 25.2
Actinidia04063 Actinidia chinensis HOM05D000992 ORTHO05D001928 7.8e-11 72.8 224 30.4
PSO017G5972 Papaver somniferum HOM05D000992 ORTHO05D001928 7.8e-11 72.8 420 24.5
BcaC03g17042 Brassica carinata HOM05D000992 ORTHO05D001928 1.0e-10 72.4 414 22.9
Solyc07g047970.4 Solanum lycopersicum HOM05D000992 ORTHO05D001928 1.3e-10 72.0 357 24.9
A02p32000 Brassica napus HOM05D000992 ORTHO05D001928 1.7e-10 71.6 356 25.8
BraA02t08211Z Brassica rapa HOM05D000992 ORTHO05D001928 1.7e-10 71.6 356 25.8
Pp3c21_8000 Physcomitrium patens HOM05D000992 ORTHO05D001928 2.3e-10 71.2 406 23.2
Thecc.02G282800 Theobroma cacao HOM05D000992 ORTHO05D001928 3.0e-10 70.9 370 25.1
EL10Ac1g00687 Beta vulgaris HOM05D000992 ORTHO05D001928 5.0e-10 70.1 404 24.0
ATR0579G172 Amborella trichopoda HOM05D000992 ORTHO05D001928 6.6e-10 69.7 351 24.5
AUR62023333 Chenopodium quinoa HOM05D000992 ORTHO05D001928 6.6e-10 69.7 411 24.1
Thhalv10000916m.g Eutrema salsugineum HOM05D000992 ORTHO05D001928 6.6e-10 69.7 358 25.1
Cc11_g08530 Coffea canephora HOM05D000992 ORTHO05D001928 1.1e-09 68.9 428 22.4
AagrBONN_evm.TU.Sc2ySwM_344.1223 Anthoceros agrestis HOM05D000992 ORTHO05D001928 1.5e-09 68.6 389 23.7
Carub.0005s0043 Capsella rubella HOM05D000992 ORTHO05D001928 1.5e-09 68.6 363 25.6
COL.COLO4_13161 Corchorus olitorius HOM05D000992 ORTHO05D001928 1.5e-09 68.6 363 24.5
Eucgr.G02182 Eucalyptus grandis HOM05D000992 ORTHO05D001928 1.5e-09 68.6 421 25.2
Manes.15G128400 Manihot esculenta HOM05D000992 ORTHO05D001928 1.9e-09 68.2 365 25.5
AL5G10450 Arabidopsis lyrata HOM05D000992 ORTHO05D001928 3.3e-09 67.4 354 26.0
Hund17156 Selenicereus undatus HOM05D000992 ORTHO05D001928 4.3e-09 67.0 365 26.6
Potri.010G111800 Populus trichocarpa HOM05D000992 ORTHO05D001928 5.6e-09 66.6 365 25.2
vmacro00410 Vaccinium macrocarpon HOM05D000992 ORTHO05D001928 5.6e-09 66.6 231 30.7
BcaB07g30396 Brassica carinata HOM05D000992 ORTHO05D001928 9.5e-09 65.9 356 24.2
Lalb_Chr05g0219541 Lupinus albus HOM05D000992 ORTHO05D001928 9.5e-09 65.9 167 35.3
Lsat_1_v5_gn_1_4261 Lactuca sativa HOM05D000992 ORTHO05D001928 1.2e-08 65.5 401 23.9
PSO478G1659 Papaver somniferum HOM05D000992 ORTHO05D001928 1.2e-08 65.5 425 24.0
TWI75G1486 Tripterygium wilfordii HOM05D000992 ORTHO05D001928 1.2e-08 65.5 183 31.7
AUR62038000 Chenopodium quinoa HOM05D000992 ORTHO05D001928 1.6e-08 65.1 403 23.6
TWI31G0575 Tripterygium wilfordii HOM05D000992 ORTHO05D001928 1.6e-08 65.1 164 32.3
Hma1.2p1_1764F.1_g301400 Hydrangea macrophylla HOM05D000992 ORTHO05D001928 2.1e-08 64.7 233 28.3
Peaxi162Scf00276g00615 Petunia axillaris HOM05D000992 ORTHO05D001928 2.1e-08 64.7 398 23.9
AagrBONN_evm.TU.Sc2ySwM_228.3928 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.8e-08 64.3 183 27.9
CARHR257330 Cardamine hirsuta HOM05D000992 ORTHO05D001928 4.7e-08 63.5 403 23.6
Lj5g0010526 Lotus japonicus HOM05D000992 ORTHO05D001928 4.7e-08 63.5 193 30.1
TAR629G1759 Trochodendron aralioides HOM05D000992 ORTHO05D001928 4.7e-08 63.5 407 24.6
Cfa008618 Carpinus fangiana HOM05D000992 ORTHO05D001928 6.2e-08 63.2 371 25.1
AT2G01470 Arabidopsis thaliana HOM05D000992 ORTHO05D001928 8.0e-08 62.8 353 24.4
SEGI_28359 Sequoiadendron giganteum HOM05D000992 ORTHO05D001928 8.0e-08 62.8 146 31.5
Sp2g12920 Schrenkiella parvula HOM05D000992 ORTHO05D001928 1.1e-07 62.4 234 28.2
Hma1.2p1_1346F.1_g277200 Hydrangea macrophylla HOM05D000992 ORTHO05D001928 1.4e-07 62.0 233 27.9
MD13G1024400 Malus domestica HOM05D000992 ORTHO05D001928 1.4e-07 62.0 218 28.9
Nn4g24190 Nelumbo nucifera HOM05D000992 ORTHO05D001928 1.4e-07 62.0 421 23.3
arahy.Tifrunner.gnm1.ann1.FYKT6P Arachis hypogaea HOM05D000992 ORTHO05D001928 1.8e-07 61.6 153 32.7
BcaC06g31305 Brassica carinata HOM05D000992 ORTHO05D001928 1.8e-07 61.6 138 31.9
PSO063G7085 Papaver somniferum HOM05D000992 ORTHO05D001928 2.3e-07 61.2 222 26.6
PSO782G4161 Papaver somniferum HOM05D000992 ORTHO05D001928 3.1e-07 60.8 217 27.2
QL11p050299 Quercus lobata HOM05D000992 ORTHO05D001928 3.1e-07 60.8 188 29.3
Dinv14423 Davidia involucrata HOM05D000992 ORTHO05D001928 4.0e-07 60.5 172 32.0
Manes.17G077900 Manihot esculenta HOM05D000992 ORTHO05D001928 4.0e-07 60.5 174 33.3
AT5G50550 Arabidopsis thaliana HOM05D000992 ORTHO05D001928 5.2e-07 60.1 361 24.9
AT5G50650 Arabidopsis thaliana HOM05D000992 ORTHO05D001928 5.2e-07 60.1 361 24.9
Ca_18738_v3 Cicer arietinum L. HOM05D000992 ORTHO05D001928 5.2e-07 60.1 263 28.1
Ca_30875_v3 Cicer arietinum L. HOM05D000992 ORTHO05D001928 5.2e-07 60.1 263 28.1
Ciclev10015444m.g Citrus clementina HOM05D000992 ORTHO05D001928 5.2e-07 60.1 170 32.4
Potri.008G130300 Populus trichocarpa HOM05D000992 ORTHO05D001928 5.2e-07 60.1 226 28.3
PRCOL_00003322 Prasinoderma coloniale HOM05D000992 ORTHO05D001928 5.2e-07 60.1 408 25.0
arahy.Tifrunner.gnm1.ann1.MZBU3F Arachis hypogaea HOM05D000992 ORTHO05D001928 6.8e-07 59.7 163 30.7
CARHR143990 Cardamine hirsuta HOM05D000992 ORTHO05D001928 8.9e-07 59.3 263 25.9
CDE02G4261 Ceratophyllum demersum HOM05D000992 ORTHO05D001928 8.9e-07 59.3 194 27.3
HanXRQChr02g0044681 Helianthus annuus HOM05D000992 ORTHO05D001928 1.5e-06 58.5 402 23.9
Lsat_1_v5_gn_9_43601 Lactuca sativa HOM05D000992 ORTHO05D001928 2.6e-06 57.8 262 27.1
Prupe.1G326100 Prunus persica HOM05D000992 ORTHO05D001928 2.6e-06 57.8 263 24.7
Lalb_Chr16g0385011 Lupinus albus HOM05D000992 ORTHO05D001928 3.4e-06 57.4 226 29.2
QL01p001467 Quercus lobata HOM05D000992 ORTHO05D001928 4.4e-06 57.0 199 27.1
Glyma.07G218700 Glycine max HOM05D000992 ORTHO05D001928 5.8e-06 56.6 159 32.1


User provided reference genes

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