Gene: Solyc07g047970.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g047970.4
  • Transcript Identifier Solyc07g047970.4.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 59070573-59077982 : negative

Gene Family Information

  • ID HOM05D000992
  • #Genes/#Species 608/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g047970.4.1
  • uniprot A0A3Q7HDL9
  • gene_id Solyc07g047970

Descriptions

  • Description SEC12-like protein 2 (AHRD V3.3 *** A0A2I4FW46_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0003400
IBA
GOA Databaseregulation of COPII vesicle coating
GO:0009306
IBA
GOA Databaseprotein secretion
GO:0006888
ISO
PLAZA Integrative Orthologyendoplasmic reticulum to Golgi vesicle-mediated transport AT2G01470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005096
IBA
GOA DatabaseGTPase activator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0030176
IBA
GOA Databaseintegral component of endoplasmic reticulum membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT2G01470
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G01470
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G01470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
Mapman id Description
22.1.1.2.2 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.guanyl-nucleotide exchange factor (Sec12)
25.3.2.3 Nutrient uptake.phosphorus assimilation.phosphate uptake.phosphate transporter trafficking factor (PHF1)