Gene: Sopen07g024400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g024400
  • Transcript Identifier Sopen07g024400.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 69821710-69828989 : negative

Gene Family Information

  • ID HOM05D000992
  • #Genes/#Species 608/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g024400.1

Descriptions

  • Description Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. | SEC12P-like 2 protein (STL2P) | FUNCTIONS IN: nucleotide binding | INVOLVED IN: ER to Golgi vesicle-mediated transport | LOCATED IN: integral to endoplasmic reticulum membrane, endoplasmic reticulum, plasma membrane, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006888
ISO
PLAZA Integrative Orthologyendoplasmic reticulum to Golgi vesicle-mediated transport AT2G01470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030176
ISO
PLAZA Integrative Orthologyintegral component of endoplasmic reticulum membrane AT2G01470
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT2G01470
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G01470
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G01470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR001680 WD40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
22.1.1.2.2 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.guanyl-nucleotide exchange factor (Sec12)
25.3.2.3 Nutrient uptake.phosphorus assimilation.phosphate uptake.phosphate transporter trafficking factor (PHF1)