Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g168350 Chlamydomonas reinhardtii HOM05D005494 ORTHO05D006689 0.0e+00 1140.2 736 100.0
Pp3c4_400 Physcomitrium patens HOM05D005494 ORTHO05D006689 2.0e-32 145.2 208 39.4
CBR_g8796 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-32 143.3 203 39.9
AagrBONN_evm.TU.Sc2ySwM_344.720 Anthoceros agrestis HOM05D005494 ORTHO05D006689 1.3e-31 142.5 204 40.2
FvH4_5g16020 Fragaria vesca HOM05D005494 ORTHO05D006689 1.0e-28 132.9 207 37.7
FAN18G0952 Fragaria x ananassa HOM05D005494 ORTHO05D006689 1.3e-28 132.5 207 37.7
FAN13G0712 Fragaria x ananassa HOM05D005494 ORTHO05D006689 2.3e-28 131.7 207 37.2
FAN04G1682 Fragaria x ananassa HOM05D005494 ORTHO05D006689 3.9e-28 131.0 207 37.2
Hund09389 Selenicereus undatus HOM05D005494 ORTHO05D006689 5.0e-28 130.6 210 37.6
AUR62012293 Chenopodium quinoa HOM05D005494 ORTHO05D006689 6.6e-28 130.2 212 35.8
PSO832G2211 Papaver somniferum HOM05D005494 ORTHO05D006689 8.6e-28 129.8 212 38.2
Potri.012G073500 Populus trichocarpa HOM05D005494 ORTHO05D006689 8.6e-28 129.8 209 36.4
RcHm_v2.0_Chr7g0180051 Rosa chinensis HOM05D005494 ORTHO05D006689 1.5e-27 129.0 207 36.7
ECA247G2071 Erigeron canadensis HOM05D005494 ORTHO05D006689 1.9e-27 128.6 210 36.2
AUR62022932 Chenopodium quinoa HOM05D005494 ORTHO05D006689 2.5e-27 128.3 210 36.2
Sabra12G0052300 Salix brachista HOM05D005494 ORTHO05D006689 2.5e-27 128.3 209 36.8
PSO591G0251 Papaver somniferum HOM05D005494 ORTHO05D006689 3.3e-27 127.9 212 38.2
HanXRQChr02g0045331 Helianthus annuus HOM05D005494 ORTHO05D006689 4.3e-27 127.5 192 37.5
Prupe.5G182300 Prunus persica HOM05D005494 ORTHO05D006689 5.6e-27 127.1 213 36.6
SEGI_00948 Sequoiadendron giganteum HOM05D005494 ORTHO05D006689 9.5e-27 126.3 195 40.0
Nn3g17064 Nelumbo nucifera HOM05D005494 ORTHO05D006689 1.6e-26 125.6 193 37.3
THA.LOC104814121 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 1.6e-26 125.6 208 36.5
HanXRQChr16g0516751 Helianthus annuus HOM05D005494 ORTHO05D006689 2.1e-26 125.2 207 35.7
Zm00001eb121920 Zea mays HOM05D005494 ORTHO05D006689 2.1e-26 125.2 207 37.7
SGA_v2.0_scaffold7G04099 Striga asiatica HOM05D005494 ORTHO05D006689 2.8e-26 124.8 212 37.3
Os01g0184000 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 3.6e-26 124.4 186 39.2
PGSC0003DMG400024571 Solanum tuberosum HOM05D005494 ORTHO05D006689 4.7e-26 124.0 209 35.9
Actinidia04945 Actinidia chinensis HOM05D005494 ORTHO05D006689 6.2e-26 123.6 208 36.1
AUR62008313 Chenopodium quinoa HOM05D005494 ORTHO05D006689 6.2e-26 123.6 212 35.4
Migut.N01938 Erythranthe guttata HOM05D005494 ORTHO05D006689 6.2e-26 123.6 215 37.2
Mapoly0002s0051 Marchantia polymorpha HOM05D005494 ORTHO05D006689 6.2e-26 123.6 195 36.4
TWI09G1329 Tripterygium wilfordii HOM05D005494 ORTHO05D006689 6.2e-26 123.6 208 37.0
DCAR_026093 Daucus carota HOM05D005494 ORTHO05D006689 8.1e-26 123.2 204 36.8
Sed0009281 Sechium edule HOM05D005494 ORTHO05D006689 8.1e-26 123.2 210 35.7
COL.COLO4_07634 Corchorus olitorius HOM05D005494 ORTHO05D006689 1.1e-25 122.9 210 35.7
Migut.D01889 Erythranthe guttata HOM05D005494 ORTHO05D006689 1.1e-25 122.9 194 38.7
AUR62021784 Chenopodium quinoa HOM05D005494 ORTHO05D006689 1.4e-25 122.5 212 34.4
Thhalv10000203m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 1.4e-25 122.5 205 35.6
Peaxi162Scf00017g02118 Petunia axillaris HOM05D005494 ORTHO05D006689 1.4e-25 122.5 209 34.9
HPP92_008786 Vanilla planifolia HOM05D005494 ORTHO05D006689 1.4e-25 122.5 190 37.9
MELO3C002226.2 Cucumis melo HOM05D005494 ORTHO05D006689 1.8e-25 122.1 210 35.2
Ciclev10020622m.g Citrus clementina HOM05D005494 ORTHO05D006689 2.3e-25 121.7 211 34.6
QL10p014050 Quercus lobata HOM05D005494 ORTHO05D006689 2.3e-25 121.7 210 34.8
Aa31LG3G16120 Aethionema arabicum HOM05D005494 ORTHO05D006689 3.1e-25 121.3 207 34.3
Solyc03g113610.4 Solanum lycopersicum HOM05D005494 ORTHO05D006689 3.1e-25 121.3 209 34.9
Lalb_Chr08g0236101 Lupinus albus HOM05D005494 ORTHO05D006689 4.0e-25 120.9 212 34.9
Sopen03g032650 Solanum pennellii HOM05D005494 ORTHO05D006689 4.0e-25 120.9 209 34.9
TAR629G2056 Trochodendron aralioides HOM05D005494 ORTHO05D006689 4.0e-25 120.9 207 33.8
CsaV3_1G008090 Cucumis sativus L. HOM05D005494 ORTHO05D006689 6.8e-25 120.2 210 34.8
MD14G1189700 Malus domestica HOM05D005494 ORTHO05D006689 8.9e-25 119.8 227 34.4
GSVIVG01008098001 Vitis vinifera HOM05D005494 ORTHO05D006689 8.9e-25 119.8 210 35.2
Cfa019036 Carpinus fangiana HOM05D005494 ORTHO05D006689 1.2e-24 119.4 207 34.3
Sp6g32480 Schrenkiella parvula HOM05D005494 ORTHO05D006689 1.2e-24 119.4 190 37.9
CSS0010415 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 1.5e-24 119.0 210 34.3
CSS0047784 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 1.5e-24 119.0 210 34.3
Dinv13115 Davidia involucrata HOM05D005494 ORTHO05D006689 1.5e-24 119.0 208 34.1
Os01g0354700 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 1.5e-24 119.0 209 34.9
Lj5C118G23 Lonicera japonica HOM05D005494 ORTHO05D006689 2.0e-24 118.6 211 36.0
CARHR202280 Cardamine hirsuta HOM05D005494 ORTHO05D006689 2.6e-24 118.2 190 37.4
TPR.G17080 Trifolium pratense HOM05D005494 ORTHO05D006689 2.6e-24 118.2 212 34.9
CANSAT80G2452 Cannabis sativa HOM05D005494 ORTHO05D006689 3.4e-24 117.9 211 35.5
ClCG01G014230 Citrullus lanatus HOM05D005494 ORTHO05D006689 4.4e-24 117.5 210 34.3
Hma1.2p1_0572F.1_g181100 Hydrangea macrophylla HOM05D005494 ORTHO05D006689 4.4e-24 117.5 210 35.2
Aqoxy3G03184 Aquilegia oxysepala HOM05D005494 ORTHO05D006689 5.8e-24 117.1 193 37.3
AT5G11010 Arabidopsis thaliana HOM05D005494 ORTHO05D006689 5.8e-24 117.1 190 36.8
MSTRG.9655 Avicennia marina HOM05D005494 ORTHO05D006689 5.8e-24 117.1 189 37.0
AL6G21610 Arabidopsis lyrata HOM05D005494 ORTHO05D006689 7.5e-24 116.7 190 36.8
THA.LOC104818279 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 7.5e-24 116.7 188 37.8
Thecc.10G120900 Theobroma cacao HOM05D005494 ORTHO05D006689 7.5e-24 116.7 210 35.2
Carub.0006s0951 Capsella rubella HOM05D005494 ORTHO05D006689 9.9e-24 116.3 190 37.4
Lsat_1_v5_gn_1_11340 Lactuca sativa HOM05D005494 ORTHO05D006689 9.9e-24 116.3 190 36.8
Dinv07986 Davidia involucrata HOM05D005494 ORTHO05D006689 1.3e-23 115.9 209 34.4
Lsat_1_v5_gn_5_17360 Lactuca sativa HOM05D005494 ORTHO05D006689 1.3e-23 115.9 205 36.1
Phvul.004G010600 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 1.3e-23 115.9 208 35.1
Glyma.05G004700 Glycine max HOM05D005494 ORTHO05D006689 1.7e-23 115.5 208 35.1
Nitab4.5_0000642g0180 Nicotiana tabacum HOM05D005494 ORTHO05D006689 1.7e-23 115.5 221 33.9
Oeu038310.1 Olea europaea HOM05D005494 ORTHO05D006689 1.7e-23 115.5 210 34.8
Glyma.04G177200 Glycine max HOM05D005494 ORTHO05D006689 2.2e-23 115.2 211 34.6
Psat7g041440 Pisum sativum HOM05D005494 ORTHO05D006689 2.2e-23 115.2 208 34.1
Psat7g079600 Pisum sativum HOM05D005494 ORTHO05D006689 2.2e-23 115.2 208 34.1
Ca_18065_v3 Cicer arietinum L. HOM05D005494 ORTHO05D006689 2.9e-23 114.8 210 33.3
Duzib084G0032 Durio zibethinus HOM05D005494 ORTHO05D006689 2.9e-23 114.8 208 35.1
Eucgr.B00382 Eucalyptus grandis HOM05D005494 ORTHO05D006689 2.9e-23 114.8 192 38.5
Gohir.A12G174400 Gossypium hirsutum HOM05D005494 ORTHO05D006689 2.9e-23 114.8 210 34.3
Gohir.D12G177100 Gossypium hirsutum HOM05D005494 ORTHO05D006689 3.7e-23 114.4 210 34.3
Gorai.008G189500 Gossypium raimondii HOM05D005494 ORTHO05D006689 3.7e-23 114.4 210 34.3
SHI07761 Sapria himalayana HOM05D005494 ORTHO05D006689 3.7e-23 114.4 192 34.4
Haze_07413 Corylus avellana HOM05D005494 ORTHO05D006689 4.9e-23 114.0 215 34.4
Rhsim08G0163400 Rhododendron simsii HOM05D005494 ORTHO05D006689 4.9e-23 114.0 238 31.9
EL10Ac5g10874 Beta vulgaris HOM05D005494 ORTHO05D006689 6.4e-23 113.6 212 34.0
VMungo0464G1007 Vigna mungo HOM05D005494 ORTHO05D006689 6.4e-23 113.6 191 36.1
CiPaw.11G034500 Carya illinoinensis HOM05D005494 ORTHO05D006689 1.1e-22 112.8 212 32.5
Aa31LG10G14040 Aethionema arabicum HOM05D005494 ORTHO05D006689 3.2e-22 111.3 208 33.2
Cpa.g.sc30.67 Carica papaya HOM05D005494 ORTHO05D006689 3.2e-22 111.3 211 33.6
Medtr8g080140 Medicago truncatula HOM05D005494 ORTHO05D006689 3.2e-22 111.3 214 34.1
PRCOL_00002205 Prasinoderma coloniale HOM05D005494 ORTHO05D006689 1.2e-21 109.4 159 41.5
Manes.14G072100 Manihot esculenta HOM05D005494 ORTHO05D006689 2.7e-21 108.2 208 32.2
A10p26670 Brassica napus HOM05D005494 ORTHO05D006689 1.7e-20 105.5 190 35.3
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 5.1e-20 104.0 160 37.5
Lj1g0011553 Lotus japonicus HOM05D005494 ORTHO05D006689 5.1e-20 104.0 209 33.0
C09p65840 Brassica napus HOM05D005494 ORTHO05D006689 6.6e-20 103.6 188 35.1
arahy.Tifrunner.gnm1.ann1.QI1X69 Arachis hypogaea HOM05D005494 ORTHO05D006689 8.6e-20 103.2 215 32.6
arahy.Tifrunner.gnm1.ann1.Y2W2NU Arachis hypogaea HOM05D005494 ORTHO05D006689 1.9e-19 102.1 215 32.1
Cc04_g16070 Coffea canephora HOM05D005494 ORTHO05D006689 2.5e-19 101.7 161 36.6
Oeu039559.2 Olea europaea HOM05D005494 ORTHO05D006689 3.3e-19 101.3 184 34.2
MD14G1057100 Malus domestica HOM05D005494 ORTHO05D006689 7.3e-19 100.1 207 31.4
unitig_8.g3614 Utricularia gibba HOM05D005494 ORTHO05D006689 7.3e-19 100.1 157 36.3
Medtr8g080150 Medicago truncatula HOM05D005494 ORTHO05D006689 9.5e-19 99.8 190 33.7
Nitab4.5_0009486g0030 Nicotiana tabacum HOM05D005494 ORTHO05D006689 9.5e-19 99.8 207 32.4
BcaC04g19267 Brassica carinata HOM05D005494 ORTHO05D006689 2.8e-18 98.2 188 34.0
CAN.G999.3 Capsicum annuum HOM05D005494 ORTHO05D006689 3.6e-18 97.8 211 34.1
vmacro19338 Vaccinium macrocarpon HOM05D005494 ORTHO05D006689 2.6e-16 91.7 282 27.3
Sc12g0005880 Simmondsia chinensis HOM05D005494 ORTHO05D006689 2.2e-15 88.6 98 44.9
HPP92_006463 Vanilla planifolia HOM05D005494 ORTHO05D006689 8.4e-15 86.7 206 28.6
Atru.chr9.2369 Acer truncatum HOM05D005494 ORTHO05D006689 3.2e-14 84.7 95 44.2
Lalb_Chr07g0182421 Lupinus albus HOM05D005494 ORTHO05D006689 4.1e-14 84.3 94 43.6
MD06G1183600 Malus domestica HOM05D005494 ORTHO05D006689 4.1e-14 84.3 93 44.1
TAR622G0530 Trochodendron aralioides HOM05D005494 ORTHO05D006689 4.6e-13 80.9 207 30.0
Lj4g0024662 Lotus japonicus HOM05D005494 ORTHO05D006689 7.3e-11 73.6 205 25.4
GSVIVG01008100001 Vitis vinifera HOM05D005494 ORTHO05D006689 1.6e-10 72.4 50 58.0
Oeu038311.1 Olea europaea HOM05D005494 ORTHO05D006689 1.1e-09 69.7 50 52.0
Glyma.06G187800 Glycine max HOM05D005494 ORTHO05D006689 3.1e-09 68.2 161 33.5
Atru.chr3.1308 Acer truncatum HOM05D005494 ORTHO05D006689 4.2e-06 57.8 78 35.9
PRCOL_00003252 Prasinoderma coloniale HOM05D004526 ORTHO05D005548 4.2e-06 57.8 155 31.0


User provided reference genes

Program Settings