Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 3.2e-80 303.1 413 100.0
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 1.1e-43 181.8 197 65.5
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 3.4e-42 176.8 198 64.6
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 4.5e-42 176.4 188 66.5
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 7.7e-42 175.6 190 65.3
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.0e-41 175.3 196 64.8
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.3e-41 174.9 196 64.8
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 5.0e-41 172.9 164 71.3
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 5.0e-41 172.9 176 68.8
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 6.5e-41 172.6 175 68.0
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 8.5e-41 172.2 175 68.0
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 8.5e-41 172.2 196 64.8
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 1.1e-40 171.8 192 66.1
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.1e-40 171.8 196 64.8
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 1.1e-40 171.8 180 68.9
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 1.9e-40 171.0 178 69.1
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.9e-40 171.0 197 62.9
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 4.2e-40 169.9 199 62.3
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 7.2e-40 169.1 191 61.3
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 7.2e-40 169.1 176 65.9
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 9.4e-40 168.7 180 67.2
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 9.4e-40 168.7 176 65.9
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 9.4e-40 168.7 176 65.9
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 2.1e-39 167.5 195 60.5
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 2.7e-39 167.2 196 63.8
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 3.6e-39 166.8 195 60.5
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 4.7e-39 166.4 192 62.5
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 6.1e-39 166.0 199 61.3
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 7.9e-39 165.6 170 68.8
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 7.9e-39 165.6 195 62.6
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 7.9e-39 165.6 196 61.2
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 1.0e-38 165.2 195 60.5
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.0e-38 165.2 175 66.9
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 1.4e-38 164.9 194 62.9
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 1.8e-38 164.5 186 64.0
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 2.3e-38 164.1 186 64.0
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 3.0e-38 163.7 167 68.3
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 3.0e-38 163.7 184 64.7
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 3.0e-38 163.7 174 65.5
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 3.0e-38 163.7 181 63.5
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 3.9e-38 163.3 195 62.1
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 3.9e-38 163.3 199 60.3
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 5.2e-38 162.9 203 58.1
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 6.7e-38 162.5 187 63.6
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 8.8e-38 162.2 188 63.3
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 1.1e-37 161.8 167 67.7
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 1.5e-37 161.4 190 64.2
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 1.5e-37 161.4 198 62.1
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 2.0e-37 161.0 188 62.8
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 2.0e-37 161.0 187 62.6
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 2.0e-37 161.0 188 62.8
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 2.0e-37 161.0 187 62.6
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 2.0e-37 161.0 176 65.3
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 4.4e-37 159.8 168 67.9
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 7.4e-37 159.1 178 64.0
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 7.4e-37 159.1 187 63.6
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 9.7e-37 158.7 176 67.6
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 1.3e-36 158.3 178 64.0
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 2.2e-36 157.5 182 63.2
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 2.8e-36 157.1 195 59.0
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 3.7e-36 156.8 188 60.1
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 4.8e-36 156.4 163 68.7
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 4.8e-36 156.4 209 59.3
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 6.3e-36 156.0 180 65.6
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 6.3e-36 156.0 205 58.5
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 8.2e-36 155.6 185 60.0
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 8.2e-36 155.6 169 68.0
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.4e-35 154.8 231 52.8
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 1.8e-35 154.5 201 59.7
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 2.4e-35 154.1 169 65.1
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 3.1e-35 153.7 185 62.7
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 4.1e-35 153.3 188 61.2
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 7.0e-35 152.5 173 63.0
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 9.1e-35 152.1 171 69.0
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.2e-34 151.8 192 60.9
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 2.6e-34 150.6 191 58.1
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 2.9e-33 147.1 199 58.3
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.1e-32 145.2 165 64.2
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.1e-32 145.2 126 61.9
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 1.1e-32 145.2 190 57.9
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 1.5e-32 144.8 195 57.4
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 3.2e-32 143.7 165 63.6
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 5.5e-32 142.9 165 63.6
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 7.2e-32 142.5 188 58.5
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 7.2e-32 142.5 188 55.9
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.6e-31 141.4 162 63.0
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 1.6e-31 141.4 159 64.2
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 1.6e-31 141.4 134 75.4
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 2.7e-31 140.6 198 55.6
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 8.0e-31 139.0 194 55.7
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.0e-30 138.7 196 46.4
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 2.0e-29 134.4 105 85.7
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.3e-28 131.7 162 66.0
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 7.2e-24 115.9 124 55.6
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 3.4e-21 107.1 184 50.5
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 2.4e-19 100.9 109 53.2
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 2.0e-13 81.3 71 91.5
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 9.8e-13 79.0 71 91.5
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.3e-12 78.6 182 35.2
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 1.7e-12 78.2 113 40.7
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.7e-09 68.2 33 90.9
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 1.1e-08 65.5 33 87.9
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.9e-08 64.7 139 30.2
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 4.3e-08 63.5 33 78.8
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 7.3e-08 62.8 33 81.8
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 6.1e-07 59.7 33 72.7
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 1.4e-06 58.5 57 43.9
AUR62014934 Chenopodium quinoa HOM05D008055 ORTHO05D009927 1.8e-06 58.2 35 71.4
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.3e-06 57.8 28 85.7


User provided reference genes

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