Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 2.2e-120 436.0 286 100.0
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 3.3e-84 315.8 354 65.3
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 4.3e-84 315.5 353 65.7
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 2.8e-83 312.8 348 66.1
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.8e-83 312.8 354 65.0
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 2.4e-82 309.7 363 64.5
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 1.2e-81 307.4 261 68.6
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 1.2e-81 307.4 261 68.6
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.5e-81 307.0 333 62.8
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 1.5e-81 307.0 355 68.2
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 2.6e-81 306.2 350 61.7
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 4.4e-81 305.4 237 67.5
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 5.8e-81 305.1 353 60.3
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.3e-80 303.9 353 60.3
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 1.3e-80 303.9 265 67.5
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 2.2e-80 303.1 265 66.0
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 2.2e-80 303.1 258 66.3
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 2.9e-80 302.8 259 66.0
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 2.9e-80 302.8 351 63.0
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 3.8e-80 302.4 261 67.4
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 3.8e-80 302.4 265 66.0
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 4.9e-80 302.0 262 63.7
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 4.9e-80 302.0 258 64.3
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 4.9e-80 302.0 352 59.9
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 8.4e-80 301.2 258 65.9
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 1.1e-79 300.8 356 60.4
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.4e-79 300.4 360 64.2
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.4e-79 300.4 347 59.4
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 1.9e-79 300.1 348 63.5
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 2.4e-79 299.7 334 62.0
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 3.2e-79 299.3 266 64.7
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 3.2e-79 299.3 348 62.6
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 4.2e-79 298.9 266 66.2
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 5.4e-79 298.5 238 67.2
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 5.4e-79 298.5 237 66.2
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 5.4e-79 298.5 237 66.2
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 5.4e-79 298.5 240 65.8
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 5.4e-79 298.5 240 65.8
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 5.4e-79 298.5 354 59.3
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 7.1e-79 298.1 354 61.3
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 1.2e-78 297.4 350 64.0
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 4.6e-78 295.4 352 61.9
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 6.0e-78 295.0 334 62.9
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 6.0e-78 295.0 237 66.2
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 7.9e-78 294.7 355 63.4
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 7.9e-78 294.7 355 63.4
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 1.7e-77 293.5 346 65.9
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 3.9e-77 292.4 235 66.0
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 5.1e-77 292.0 237 64.1
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 6.6e-77 291.6 355 63.1
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 6.6e-77 291.6 268 65.7
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 8.7e-77 291.2 237 65.0
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 8.7e-77 291.2 237 65.0
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 1.1e-76 290.8 238 64.3
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 1.5e-76 290.4 348 59.5
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 3.3e-76 289.3 350 66.6
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 3.3e-76 289.3 235 65.1
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 4.3e-76 288.9 355 63.9
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 4.3e-76 288.9 235 66.0
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 5.6e-76 288.5 348 59.2
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 7.4e-76 288.1 228 67.1
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 9.6e-76 287.7 236 64.4
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 2.8e-75 286.2 333 64.3
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 3.6e-75 285.8 234 65.8
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 1.1e-74 284.3 366 63.1
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 1.8e-74 283.5 237 63.7
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 4.0e-74 282.3 228 66.2
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 4.0e-74 282.3 228 66.2
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 4.0e-74 282.3 234 65.4
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 9.0e-74 281.2 228 65.8
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 1.2e-73 280.8 236 64.0
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.2e-73 280.8 219 66.7
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 2.0e-73 280.0 228 65.8
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 2.0e-73 280.0 237 63.3
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 2.6e-73 279.6 414 52.2
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 3.4e-73 279.3 228 65.8
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 3.4e-73 279.3 230 66.1
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 4.5e-73 278.9 431 51.3
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 5.8e-73 278.5 348 64.4
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 7.6e-73 278.1 235 64.7
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 7.6e-73 278.1 351 61.3
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 7.6e-73 278.1 351 61.8
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 1.3e-72 277.3 220 66.4
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 6.4e-72 275.0 228 64.0
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 6.4e-72 275.0 228 64.0
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 6.4e-72 275.0 224 64.7
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 6.4e-72 275.0 350 60.9
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 8.4e-72 274.6 221 66.1
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 8.4e-72 274.6 228 64.0
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 8.4e-72 274.6 228 64.0
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 1.9e-71 273.5 259 62.9
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 2.4e-71 273.1 222 64.9
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 1.8e-69 266.9 232 62.9
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 8.7e-69 264.6 240 59.6
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 1.1e-68 264.2 349 56.2
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.8e-67 259.6 232 61.6
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 5.3e-66 255.4 209 64.6
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 1.2e-65 254.2 240 58.8
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.6e-65 253.1 236 59.3
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 2.9e-64 249.6 241 57.7
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 2.9e-64 249.6 223 61.0
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 2.9e-64 249.6 224 57.6
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 1.1e-63 247.7 128 92.2
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 3.2e-63 246.1 164 74.4
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 7.1e-63 245.0 224 78.6
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.2e-62 244.2 253 55.3
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.3e-61 240.7 245 55.9
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 2.3e-61 240.0 239 75.7
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 3.3e-60 236.1 208 63.0
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 2.8e-59 233.0 214 59.3
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 3.7e-59 232.6 128 85.9
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 2.2e-56 223.4 169 68.6
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 2.1e-54 216.9 122 84.4
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 2.1e-54 216.9 211 56.4
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 2.7e-54 216.5 122 82.8
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 3.9e-53 212.6 235 50.6
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 3.7e-51 206.1 228 49.6
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.1e-50 203.0 222 74.3
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.5e-49 200.7 107 86.0
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 5.9e-49 198.7 246 61.4
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 2.2e-48 196.8 131 74.8
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 5.0e-48 195.7 181 60.2
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 1.9e-47 193.7 342 38.0
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 3.0e-45 186.4 97 89.7
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 3.0e-45 186.4 225 52.0
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 3.9e-45 186.0 219 47.0
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 1.8e-42 177.2 106 81.1
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 2.2e-40 170.2 91 86.8
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 3.2e-39 166.4 129 65.9
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 1.6e-38 164.1 199 64.3
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 2.0e-36 157.1 184 49.5
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 8.5e-32 141.7 83 80.7
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 9.7e-28 128.3 112 62.5
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 8.5e-24 115.2 88 70.5
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 1.6e-22 110.9 132 50.0
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 1.2e-20 104.8 50 100.0
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 1.2e-20 104.8 50 100.0
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 4.4e-20 102.8 166 58.4
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.7e-19 100.9 50 94.0
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 2.8e-19 100.1 50 96.0
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.7e-17 93.6 50 92.0
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 3.5e-17 93.2 50 92.0
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 1.7e-16 90.9 50 86.0
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 4.2e-15 86.3 50 86.0
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 5.5e-15 85.9 46 84.8
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 3.1e-10 70.1 60 63.3
Haze_08899 Corylus avellana HOM05D004689 ORTHO05D165887 5.4e-10 69.3 167 58.7
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 7.0e-10 68.9 38 86.8
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 7.0e-10 68.9 60 58.3
Haze_05345 Corylus avellana HOM05D004689 ORTHO05D023802 1.3e-08 64.7 146 59.6
Haze_08645 Corylus avellana HOM05D004689 ORTHO05D023802 1.7e-08 64.3 59 61.0
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 7.3e-07 58.9 44 65.9


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