Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc76.48 Carica papaya HOM05D001734 ORTHO05D120772 3.0e-151 538.5 272 100.0
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.0e-10 71.6 60 58.3
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 1.3e-10 71.2 82 48.8
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 1.3e-10 71.2 81 49.4
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 5.6e-09 65.9 47 63.8
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 5.6e-09 65.9 58 55.2
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 5.6e-09 65.9 41 70.7
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 9.6e-09 65.1 113 33.6
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 9.6e-09 65.1 58 56.9
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 9.6e-09 65.1 58 56.9
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 9.6e-09 65.1 58 56.9
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 9.6e-09 65.1 58 56.9
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 9.6e-09 65.1 60 50.0
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.6e-08 64.3 47 57.4
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.6e-08 64.3 69 49.3
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.6e-08 64.3 171 32.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.6e-08 64.3 70 51.4
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 2.1e-08 63.9 60 50.0
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.1e-08 63.9 81 44.4
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 6.2e-08 62.4 117 33.3
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 6.2e-08 62.4 58 53.4
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.1e-07 61.6 113 31.9
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 1.1e-07 61.6 58 51.7
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 1.8e-07 60.8 111 32.4
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.8e-07 60.8 58 50.0
Lj9A448G32 Lonicera japonica HOM05D001734 ORTHO05D003483 1.8e-07 60.8 81 42.0
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 1.8e-07 60.8 99 36.4
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 1.8e-07 60.8 119 31.1
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 1.8e-07 60.8 59 47.5
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 3.1e-07 60.1 58 53.4
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 3.1e-07 60.1 60 48.3
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 4.0e-07 59.7 60 46.7
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 4.0e-07 59.7 40 65.0
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.0e-07 59.7 60 50.0
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 5.3e-07 59.3 57 50.9
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 6.9e-07 58.9 82 41.5
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 6.9e-07 58.9 74 41.9
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 9.0e-07 58.5 43 60.5
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 9.0e-07 58.5 40 67.5
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 9.0e-07 58.5 40 70.0
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.2e-06 58.2 60 45.0
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.5e-06 57.8 34 73.5
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.5e-06 57.8 76 39.5
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.5e-06 57.8 34 73.5
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.5e-06 57.8 61 50.8
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 2.0e-06 57.4 60 48.3
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 2.6e-06 57.0 99 33.3
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 4.5e-06 56.2 111 34.2
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.5e-06 56.2 40 60.0
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 5.8e-06 55.8 40 65.0
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 5.8e-06 55.8 34 70.6
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 5.8e-06 55.8 34 70.6
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.8e-06 55.8 34 70.6
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.6e-06 55.5 60 46.7
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 7.6e-06 55.5 39 59.0
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 7.6e-06 55.5 40 57.5
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 1.0e-05 55.1 58 48.3
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.0e-05 55.1 58 48.3
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.0e-05 55.1 40 62.5


User provided reference genes

Program Settings