Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc74.29 Carica papaya HOM05D000329 ORTHO05D120886 2.9e-57 224.9 109 100.0
Ciclev10018462m.g Citrus clementina HOM05D000329 ORTHO05D000833 1.9e-16 89.4 85 54.1
Potri.003G126600 Populus trichocarpa HOM05D000329 ORTHO05D000833 4.7e-15 84.7 85 51.8
CiPaw.12G093800 Carya illinoinensis HOM05D000329 ORTHO05D000833 1.4e-14 83.2 84 52.4
Manes.01G061050 Manihot esculenta HOM05D000329 ORTHO05D000833 1.8e-14 82.8 85 49.4
MD14G1103700 Malus domestica HOM05D000329 ORTHO05D000833 5.8e-13 77.8 84 46.4
MD06G1081900 Malus domestica HOM05D000329 ORTHO05D000833 1.3e-12 76.6 85 45.9
CsaV3_5G002860 Cucumis sativus L. HOM05D000329 ORTHO05D000833 3.7e-12 75.1 84 47.6
Prupe.5G099000 Prunus persica HOM05D000329 ORTHO05D000833 3.7e-12 75.1 84 45.2
PGR031G0355 Punica granatum HOM05D000329 ORTHO05D000833 3.7e-12 75.1 85 44.7
ClCG01G002770 Citrullus lanatus HOM05D000329 ORTHO05D000833 4.9e-12 74.7 84 46.4
GSVIVG01019761001 Vitis vinifera HOM05D000329 ORTHO05D000833 4.9e-12 74.7 82 47.6
Atru.chr9.2249 Acer truncatum HOM05D000329 ORTHO05D000833 1.4e-11 73.2 84 46.4
Haze_08848 Corylus avellana HOM05D000329 ORTHO05D000833 3.2e-11 72.0 85 45.9
Lj2A191G51 Lonicera japonica HOM05D000329 ORTHO05D000833 4.1e-11 71.6 84 45.2
QL12p034051 Quercus lobata HOM05D000329 ORTHO05D000833 4.1e-11 71.6 83 45.8
TWI81G0989 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 4.1e-11 71.6 85 45.9
DCAR_006743 Daucus carota HOM05D000329 ORTHO05D000833 7.0e-11 70.9 92 42.4
FAN04G0379 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.6e-10 69.7 85 44.7
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 1.6e-10 69.7 83 44.6
Rhsim02G0228800 Rhododendron simsii HOM05D000329 ORTHO05D000833 1.6e-10 69.7 86 43.0
TAR636G0974 Trochodendron aralioides HOM05D000329 ORTHO05D000833 1.6e-10 69.7 85 42.4
Cfa012174 Carpinus fangiana HOM05D000329 ORTHO05D000833 2.0e-10 69.3 85 47.1
Dinv38948 Davidia involucrata HOM05D000329 ORTHO05D000833 2.0e-10 69.3 84 44.0
THA.LOC104818027 Tarenaya hassleriana HOM05D000329 ORTHO05D000833 2.0e-10 69.3 86 44.2
Actinidia02012 Actinidia chinensis HOM05D000329 ORTHO05D000833 2.7e-10 68.9 85 47.1
FAN08G1575 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.5e-10 68.6 85 43.5
FAN18G0976 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.5e-10 68.6 85 42.4
MBI17_g28345_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D000833 4.6e-10 68.2 85 40.0
FAN13G2110 Fragaria x ananassa HOM05D000329 ORTHO05D000833 7.8e-10 67.4 85 42.4
Sed0005725 Sechium edule HOM05D000329 ORTHO05D000833 7.8e-10 67.4 84 42.9
FvH4_5g02310 Fragaria vesca HOM05D000329 ORTHO05D000833 1.0e-09 67.0 85 41.2
Actinidia14555 Actinidia chinensis HOM05D000329 ORTHO05D000833 1.3e-09 66.6 85 45.9
CSS0031193 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D000833 1.7e-09 66.2 85 40.0
Nn1g01495 Nelumbo nucifera HOM05D000329 ORTHO05D000833 1.7e-09 66.2 85 42.4
vmacro11324 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 1.7e-09 66.2 85 41.2
Sabra03G0089600 Salix brachista HOM05D000329 ORTHO05D000833 3.9e-09 65.1 64 51.6
COL.COLO4_34455 Corchorus olitorius HOM05D000329 ORTHO05D000833 5.0e-09 64.7 84 40.5
ECA246G1250 Erigeron canadensis HOM05D000329 ORTHO05D000833 2.5e-08 62.4 84 36.9
RcHm_v2.0_Chr7g0197841 Rosa chinensis HOM05D000329 ORTHO05D000833 2.5e-08 62.4 85 41.2
Cc08_g14660 Coffea canephora HOM05D000329 ORTHO05D000833 3.3e-08 62.0 84 39.3
Gohir.D08G200900 Gossypium hirsutum HOM05D000329 ORTHO05D000833 4.3e-08 61.6 84 38.1
Gorai.004G211700 Gossypium raimondii HOM05D000329 ORTHO05D000833 4.3e-08 61.6 84 38.1
arahy.Tifrunner.gnm1.ann1.AJP7R9 Arachis hypogaea HOM05D000329 ORTHO05D000833 2.1e-07 59.3 78 41.0
MELO3C005670.2 Cucumis melo HOM05D000329 ORTHO05D000833 2.1e-07 59.3 84 39.3
Duzib068G0085 Durio zibethinus HOM05D000329 ORTHO05D000833 3.6e-07 58.5 84 39.3
Lalb_Chr09g0321021 Lupinus albus HOM05D000329 ORTHO05D000833 3.6e-07 58.5 82 40.2
TPR.G6625 Trifolium pratense HOM05D000329 ORTHO05D000833 6.2e-07 57.8 82 35.4
arahy.Tifrunner.gnm1.ann1.6V6FMV Arachis hypogaea HOM05D000329 ORTHO05D000833 8.0e-07 57.4 78 39.7
Gohir.A08G182350 Gossypium hirsutum HOM05D000329 ORTHO05D000833 1.8e-06 56.2 84 36.9
Phvul.002G157500 Phaseolus vulgaris HOM05D000329 ORTHO05D000833 1.8e-06 56.2 82 35.4
Aqoxy5G04007 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 2.3e-06 55.8 87 40.2
Medtr5g010300 Medicago truncatula HOM05D000329 ORTHO05D000833 2.3e-06 55.8 82 36.6
Eucgr.D01851 Eucalyptus grandis HOM05D000329 ORTHO05D000833 3.1e-06 55.5 86 36.0
Thecc.03G277900 Theobroma cacao HOM05D000329 ORTHO05D000833 4.0e-06 55.1 84 36.9
MSTRG.13841 Avicennia marina HOM05D000329 ORTHO05D000833 5.2e-06 54.7 84 34.5
Glyma.01G219800 Glycine max HOM05D000329 ORTHO05D000833 5.2e-06 54.7 82 35.4
Glyma.11G023700 Glycine max HOM05D000329 ORTHO05D000833 5.2e-06 54.7 82 35.4
Psat2g182320 Pisum sativum HOM05D000329 ORTHO05D000833 5.2e-06 54.7 82 35.4
VMungo1215G1167 Vigna mungo HOM05D000329 ORTHO05D000833 5.2e-06 54.7 82 35.4
CDE06G0648 Ceratophyllum demersum HOM05D000329 ORTHO05D000833 6.8e-06 54.3 58 37.9
Nitab4.5_0003441g0110 Nicotiana tabacum HOM05D000329 ORTHO05D000833 8.9e-06 53.9 86 41.9


User provided reference genes

Program Settings