Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 5.4e-89 330.9 156 100.0
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 3.1e-60 235.3 119 90.8
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 5.8e-59 231.1 118 89.8
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 7.6e-59 230.7 119 89.1
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 1.3e-58 229.9 119 89.9
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 1.3e-58 229.9 119 89.9
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 2.9e-58 228.8 119 87.4
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 4.9e-58 228.0 112 92.9
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 6.4e-58 227.6 119 88.2
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 8.4e-58 227.3 119 88.2
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 1.1e-57 226.9 119 87.4
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 1.4e-57 226.5 119 87.4
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 1.4e-57 226.5 119 86.6
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 1.4e-57 226.5 119 86.6
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 1.9e-57 226.1 119 86.6
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 2.4e-57 225.7 119 86.6
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.4e-57 225.7 124 87.1
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 3.2e-57 225.3 112 92.0
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 4.2e-57 224.9 119 85.7
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 4.2e-57 224.9 112 92.9
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 5.4e-57 224.6 124 87.1
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 7.1e-57 224.2 111 91.9
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 7.1e-57 224.2 119 87.4
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 7.1e-57 224.2 119 84.9
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 9.3e-57 223.8 112 92.0
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 1.2e-56 223.4 112 93.8
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 1.2e-56 223.4 117 86.3
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 1.2e-56 223.4 112 91.1
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 1.2e-56 223.4 119 86.6
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 1.6e-56 223.0 112 91.1
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 3.5e-56 221.9 119 85.7
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 3.5e-56 221.9 119 84.0
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 4.6e-56 221.5 119 84.9
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 7.9e-56 220.7 148 73.0
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 3.0e-55 218.8 119 85.7
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 3.0e-55 218.8 140 74.3
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 8.7e-55 217.2 119 83.2
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 8.7e-55 217.2 112 88.4
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 8.7e-55 217.2 119 84.0
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 1.1e-54 216.9 119 84.0
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 1.1e-54 216.9 119 83.2
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 1.1e-54 216.9 120 84.2
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 1.1e-54 216.9 119 84.0
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 1.9e-54 216.1 119 83.2
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 1.9e-54 216.1 112 88.4
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 1.9e-54 216.1 112 88.4
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 2.5e-54 215.7 112 90.2
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 2.5e-54 215.7 112 87.5
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 4.3e-54 214.9 119 81.5
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 5.6e-54 214.5 119 82.4
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 5.6e-54 214.5 119 82.4
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 5.6e-54 214.5 124 83.9
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 7.4e-54 214.2 112 87.5
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 9.6e-54 213.8 119 82.4
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 9.6e-54 213.8 119 82.4
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 9.6e-54 213.8 119 82.4
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 2.1e-53 212.6 113 89.4
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 6.2e-53 211.1 119 80.7
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 6.2e-53 211.1 119 80.7
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 1.1e-52 210.3 119 80.7
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 1.1e-52 210.3 112 85.7
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 1.1e-52 210.3 112 88.4
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 1.4e-52 209.9 119 80.7
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 1.4e-52 209.9 112 83.9
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 1.4e-52 209.9 119 80.7
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 1.8e-52 209.5 119 80.7
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 2.4e-52 209.1 119 82.4
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 3.1e-52 208.8 119 84.0
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 4.0e-52 208.4 112 84.8
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 4.0e-52 208.4 112 86.6
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 5.3e-52 208.0 119 79.0
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 5.3e-52 208.0 119 83.2
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 6.9e-52 207.6 119 80.7
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 6.9e-52 207.6 119 80.7
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 9.0e-52 207.2 119 80.7
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 1.2e-51 206.8 112 85.7
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 2.0e-51 206.1 112 83.0
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 2.6e-51 205.7 148 67.6
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 9.9e-51 203.8 112 81.2
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 1.3e-50 203.4 124 77.4
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 2.9e-50 202.2 119 77.3
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.9e-50 201.4 115 80.0
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 1.1e-49 200.3 124 75.0
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.4e-49 199.9 112 80.4
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.4e-49 199.9 110 81.8
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.9e-49 199.5 111 82.0
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 7.1e-49 197.6 121 76.9
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 1.6e-48 196.4 112 82.1
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 3.5e-48 195.3 122 76.2
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 5.1e-47 191.4 123 72.4
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 1.1e-46 190.3 124 71.0
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 2.1e-45 186.0 99 85.9
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 2.1e-45 186.0 119 76.5
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 4.9e-42 174.9 103 79.6
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 8.4e-42 174.1 119 67.2
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 7.1e-41 171.0 93 84.9
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 1.6e-40 169.9 99 78.8
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 2.7e-40 169.1 106 76.4
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 4.6e-40 168.3 148 59.5
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 4.6e-40 168.3 113 70.8
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 7.9e-40 167.5 85 89.4
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 1.8e-39 166.4 85 89.4
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 3.9e-39 165.2 84 90.5
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 5.1e-39 164.9 124 69.4
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.9e-38 162.9 84 88.1
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 1.9e-33 146.4 115 62.6
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.7e-32 142.5 79 81.0
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 4.1e-28 128.6 95 63.2
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 2.2e-26 122.9 67 83.6
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 5.0e-26 121.7 69 85.5
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 5.5e-25 118.2 80 72.5
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 4.7e-24 115.2 54 90.7
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 1.4e-23 113.6 58 86.2
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 5.1e-23 111.7 58 84.5
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 4.4e-22 108.6 104 49.0
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 4.4e-22 108.6 104 49.0
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 3.2e-17 92.4 104 45.2
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 7.2e-17 91.3 104 45.2
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 1.8e-15 86.7 55 72.7
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 1.8e-12 76.6 34 94.1
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 1.7e-10 70.1 57 52.6
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.5e-09 66.2 90 38.9
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 9.4e-09 64.3 40 72.5
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 3.6e-08 62.4 105 31.4
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 3.6e-08 62.4 39 71.8


User provided reference genes

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