Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc466.5 Carica papaya HOM05D002519 ORTHO05D002747 9.5e-56 219.9 110 100.0
Haze_16921 Corylus avellana HOM05D002519 ORTHO05D002747 2.5e-16 89.0 64 68.8
Cfa001605 Carpinus fangiana HOM05D002519 ORTHO05D002747 9.6e-16 87.0 64 67.2
CiPaw.01G274900 Carya illinoinensis HOM05D002519 ORTHO05D002747 3.6e-15 85.1 78 59.0
TWI63G0585 Tripterygium wilfordii HOM05D002519 ORTHO05D002747 6.2e-15 84.3 80 58.8
QL08p056579 Quercus lobata HOM05D002519 ORTHO05D002747 1.8e-14 82.8 63 68.3
CsaV3_5G025800 Cucumis sativus L. HOM05D002519 ORTHO05D002747 2.4e-14 82.4 87 54.0
THA.LOC104802672 Tarenaya hassleriana HOM05D002519 ORTHO05D002747 1.5e-13 79.7 74 59.5
Atru.chr12.722 Acer truncatum HOM05D002519 ORTHO05D002747 2.0e-13 79.3 73 63.0
Manes.03G070720 Manihot esculenta HOM05D002519 ORTHO05D002747 2.0e-13 79.3 78 61.5
arahy.Tifrunner.gnm1.ann1.4X8M90 Arachis hypogaea HOM05D002519 ORTHO05D002747 2.6e-13 79.0 62 72.6
Lj2g0000462 Lotus japonicus HOM05D002519 ORTHO05D002747 2.6e-13 79.0 81 60.5
ClCG09G020560 Citrullus lanatus HOM05D002519 ORTHO05D002747 3.4e-13 78.6 86 53.5
CSS0050472 Camellia sinensis var. sinensis HOM05D002519 ORTHO05D002747 4.4e-13 78.2 88 61.4
Gohir.A10G207300 Gossypium hirsutum HOM05D002519 ORTHO05D002747 7.6e-13 77.4 66 62.1
Thecc.10G070100 Theobroma cacao HOM05D002519 ORTHO05D002747 9.9e-13 77.0 66 65.2
CSS0043906 Camellia sinensis var. sinensis HOM05D002519 ORTHO05D002747 1.7e-12 76.3 84 59.5
Lalb_Chr19g0129601 Lupinus albus HOM05D002519 ORTHO05D002747 2.2e-12 75.9 54 64.8
Sc20g0001990 Simmondsia chinensis HOM05D002519 ORTHO05D002747 2.9e-12 75.5 58 63.8
Ciclev10032402m.g Citrus clementina HOM05D002519 ORTHO05D002747 4.9e-12 74.7 70 61.4
Duzib114G0752 Durio zibethinus HOM05D002519 ORTHO05D002747 6.4e-12 74.3 56 64.3
COL.COLO4_23716 Corchorus olitorius HOM05D002519 ORTHO05D002747 8.4e-12 73.9 52 75.0
Sed0009083 Sechium edule HOM05D002519 ORTHO05D002747 8.4e-12 73.9 79 53.2
Potri.010G219800 Populus trichocarpa HOM05D002519 ORTHO05D002747 2.4e-11 72.4 69 53.6
TAR623G1324 Trochodendron aralioides HOM05D002519 ORTHO05D002747 4.2e-11 71.6 55 67.3
Ca_12870_v3 Cicer arietinum L. HOM05D002519 ORTHO05D002747 7.1e-11 70.9 56 58.9
Gohir.D10G215400 Gossypium hirsutum HOM05D002519 ORTHO05D002747 9.3e-11 70.5 66 57.6
Gorai.011G240900 Gossypium raimondii HOM05D002519 ORTHO05D002747 9.3e-11 70.5 66 57.6
Sabra10G0169600 Salix brachista HOM05D002519 ORTHO05D002747 1.6e-10 69.7 63 55.6
VMungo0464G1286 Vigna mungo HOM05D002519 ORTHO05D002747 1.6e-10 69.7 78 51.3
Aa31LG10G7370 Aethionema arabicum HOM05D002519 ORTHO05D002747 2.7e-10 68.9 65 55.4
Dinv31356 Davidia involucrata HOM05D002519 ORTHO05D002747 3.5e-10 68.6 60 63.3
BraA03t13980Z Brassica rapa HOM05D002519 ORTHO05D002747 4.6e-10 68.2 65 53.8
GSVIVG01016312001 Vitis vinifera HOM05D002519 ORTHO05D002747 4.6e-10 68.2 68 54.4
A03p48800 Brassica napus HOM05D002519 ORTHO05D002747 1.0e-09 67.0 65 52.3
AUR62020762 Chenopodium quinoa HOM05D002519 ORTHO05D002747 2.3e-09 65.9 60 60.0
Ciclev10002202m.g Citrus clementina HOM05D002519 ORTHO05D002747 2.3e-09 65.9 61 55.7
AUR62027950 Chenopodium quinoa HOM05D002519 ORTHO05D002747 3.0e-09 65.5 64 57.8
Nn2g10708 Nelumbo nucifera HOM05D002519 ORTHO05D002747 3.0e-09 65.5 54 59.3
Hund22499 Selenicereus undatus HOM05D002519 ORTHO05D002747 3.0e-09 65.5 57 57.9
Duzib116G0790 Durio zibethinus HOM05D002519 ORTHO05D002747 3.9e-09 65.1 53 54.7
vmacro07084 Vaccinium macrocarpon HOM05D002519 ORTHO05D002747 3.9e-09 65.1 78 56.4
Prupe.2G215900 Prunus persica HOM05D002519 ORTHO05D002747 5.1e-09 64.7 66 54.5
TAR369G1075 Trochodendron aralioides HOM05D002519 ORTHO05D002747 5.1e-09 64.7 55 65.5
Potri.002G028900 Populus trichocarpa HOM05D002519 ORTHO05D002747 6.6e-09 64.3 62 51.6
Rhsim03G0123900 Rhododendron simsii HOM05D002519 ORTHO05D002747 6.6e-09 64.3 71 54.9
EL10Ac2g03587 Beta vulgaris HOM05D002519 ORTHO05D002747 1.1e-08 63.5 53 60.4
BcaC07g39599 Brassica carinata HOM05D002519 ORTHO05D002747 1.1e-08 63.5 54 57.4
A03p48780 Brassica napus HOM05D002519 ORTHO05D002747 1.1e-08 63.5 71 50.7
C08p27520 Brassica napus HOM05D002519 ORTHO05D002747 1.1e-08 63.5 54 57.4
BolC8t50371H Brassica oleracea HOM05D002519 ORTHO05D002747 1.1e-08 63.5 54 57.4
Thecc.08G036200 Theobroma cacao HOM05D002519 ORTHO05D002747 1.1e-08 63.5 60 51.7
CANSAT56G4128 Cannabis sativa HOM05D002519 ORTHO05D002747 1.9e-08 62.8 54 61.1
Sabra02G0023000 Salix brachista HOM05D002519 ORTHO05D002747 2.5e-08 62.4 66 51.5
A09p45330 Brassica napus HOM05D002519 ORTHO05D002747 3.3e-08 62.0 68 50.0
BraA09t39996Z Brassica rapa HOM05D002519 ORTHO05D002747 3.3e-08 62.0 68 50.0
Manes.05G153300 Manihot esculenta HOM05D002519 ORTHO05D002747 3.3e-08 62.0 52 57.7
PSO541G0797 Papaver somniferum HOM05D002519 ORTHO05D002747 3.3e-08 62.0 71 53.5
PSO675G5473 Papaver somniferum HOM05D002519 ORTHO05D002747 3.3e-08 62.0 71 54.9
TPR.G36642 Trifolium pratense HOM05D002519 ORTHO05D002747 3.3e-08 62.0 78 47.4
C07p46890 Brassica napus HOM05D002519 ORTHO05D002747 4.3e-08 61.6 65 50.8
BolC7t45205H Brassica oleracea HOM05D002519 ORTHO05D002747 4.3e-08 61.6 65 50.8
AUR62034549 Chenopodium quinoa HOM05D002519 ORTHO05D002747 4.3e-08 61.6 58 50.0
Gohir.D01G101300 Gossypium hirsutum HOM05D002519 ORTHO05D002747 4.3e-08 61.6 60 50.0
Gorai.002G125800 Gossypium raimondii HOM05D002519 ORTHO05D002747 4.3e-08 61.6 60 50.0
AUR62014448 Chenopodium quinoa HOM05D002519 ORTHO05D002747 5.6e-08 61.2 58 50.0
COL.COLO4_26217 Corchorus olitorius HOM05D002519 ORTHO05D002747 5.6e-08 61.2 60 46.7
Atru.chr13.377 Acer truncatum HOM05D002519 ORTHO05D002747 7.3e-08 60.8 54 57.4
BraA03t13978Z Brassica rapa HOM05D002519 ORTHO05D002747 9.6e-08 60.5 71 49.3
Carub.0005s1863 Capsella rubella HOM05D002519 ORTHO05D002747 9.6e-08 60.5 65 49.2
Eucgr.G02813 Eucalyptus grandis HOM05D002519 ORTHO05D002747 9.6e-08 60.5 85 44.7
Hma1.2p1_1386F.1_g279890 Hydrangea macrophylla HOM05D002519 ORTHO05D002747 9.6e-08 60.5 70 54.3
Medtr3g112490 Medicago truncatula HOM05D002519 ORTHO05D002747 9.6e-08 60.5 57 52.6
Sp5g09990 Schrenkiella parvula HOM05D002519 ORTHO05D002747 9.6e-08 60.5 65 49.2
Dinv31803 Davidia involucrata HOM05D002519 ORTHO05D002747 1.3e-07 60.1 60 55.0
PGR142G1386 Punica granatum HOM05D002519 ORTHO05D002747 1.6e-07 59.7 76 44.7
Gohir.A05G258000 Gossypium hirsutum HOM05D002519 ORTHO05D002747 2.1e-07 59.3 56 50.0
arahy.Tifrunner.gnm1.ann1.UQ4UHV Arachis hypogaea HOM05D002519 ORTHO05D002747 2.8e-07 58.9 50 56.0
arahy.Tifrunner.gnm1.ann1.XW2FM5 Arachis hypogaea HOM05D002519 ORTHO05D002747 2.8e-07 58.9 50 56.0
SGA_v2.0_scaffold341G49356 Striga asiatica HOM05D002519 ORTHO05D002747 2.8e-07 58.9 72 44.4
Atru.chr12.721 Acer truncatum HOM05D002519 ORTHO05D005165 3.6e-07 58.5 79 41.8
Hund17207 Selenicereus undatus HOM05D002519 ORTHO05D002747 3.6e-07 58.5 55 49.1
Ah.05g172080 Amaranthus hybridus HOM05D002519 ORTHO05D002747 4.8e-07 58.2 63 46.0
C07p46870 Brassica napus HOM05D002519 ORTHO05D002747 4.8e-07 58.2 74 44.6
BolC7t45203H Brassica oleracea HOM05D002519 ORTHO05D002747 4.8e-07 58.2 74 44.6
CDE04G2675 Ceratophyllum demersum HOM05D002519 ORTHO05D002747 4.8e-07 58.2 57 56.1
Nn5g29162 Nelumbo nucifera HOM05D002519 ORTHO05D002747 4.8e-07 58.2 52 55.8
TWI56G0427 Tripterygium wilfordii HOM05D002519 ORTHO05D002747 6.2e-07 57.8 52 51.9
Aqoxy6G02437 Aquilegia oxysepala HOM05D002519 ORTHO05D002747 8.1e-07 57.4 50 54.0
Glyma.06G027900 Glycine max HOM05D002519 ORTHO05D002747 8.1e-07 57.4 75 40.0
Sabra05G0180300 Salix brachista HOM05D002519 ORTHO05D002747 8.1e-07 57.4 68 48.5
GSVIVG01009806001 Vitis vinifera HOM05D002519 ORTHO05D002747 8.1e-07 57.4 67 50.7
Cpa.g.sc140.6 Carica papaya HOM05D002519 ORTHO05D002747 1.1e-06 57.0 66 51.5
Lj1g0001366 Lotus japonicus HOM05D002519 ORTHO05D002747 1.1e-06 57.0 51 51.0
RcHm_v2.0_Chr1g0363871 Rosa chinensis HOM05D002519 ORTHO05D002747 1.1e-06 57.0 75 48.0
Lj1C919G8 Lonicera japonica HOM05D002519 ORTHO05D002747 1.4e-06 56.6 67 49.3
PGR031G1279 Punica granatum HOM05D002519 ORTHO05D002747 1.4e-06 56.6 52 59.6
Duzib093G1845 Durio zibethinus HOM05D002519 ORTHO05D002747 1.8e-06 56.2 60 46.7
Psat1g105000 Pisum sativum HOM05D002519 ORTHO05D002747 1.8e-06 56.2 51 51.0
Potri.005G233800 Populus trichocarpa HOM05D002519 ORTHO05D002747 1.8e-06 56.2 61 50.8
Sc26g0003330 Simmondsia chinensis HOM05D002519 ORTHO05D002747 1.8e-06 56.2 68 44.1
AL5G32860 Arabidopsis lyrata HOM05D002519 ORTHO05D002747 2.4e-06 55.8 65 49.2
Migut.F01764 Erythranthe guttata HOM05D002519 ORTHO05D002747 2.4e-06 55.8 63 49.2
Ca_02066_v3 Cicer arietinum L. HOM05D002519 ORTHO05D002747 3.1e-06 55.5 61 47.5
Glyma.04G027700 Glycine max HOM05D002519 ORTHO05D002747 3.1e-06 55.5 79 39.2
Gorai.009G271200 Gossypium raimondii HOM05D002519 ORTHO05D002747 3.1e-06 55.5 62 43.5
SalBow8G2127 Salvia bowleyana HOM05D002519 ORTHO05D002747 3.1e-06 55.5 63 49.2
TAR376G0689 Trochodendron aralioides HOM05D002519 ORTHO05D002747 3.1e-06 55.5 50 60.0
ATR0661G171 Amborella trichopoda HOM05D002519 ORTHO05D002747 4.0e-06 55.1 48 52.1
Cc02_g11430 Coffea canephora HOM05D002519 ORTHO05D002747 4.0e-06 55.1 85 41.2
CsaV3_2G029190 Cucumis sativus L. HOM05D002519 ORTHO05D002747 4.0e-06 55.1 70 47.1
Cfa013895 Carpinus fangiana HOM05D002519 ORTHO05D002747 5.3e-06 54.7 67 49.3
Sed0009290 Sechium edule HOM05D002519 ORTHO05D002747 5.3e-06 54.7 58 50.0
EL10Ac1g00569 Beta vulgaris HOM05D002519 ORTHO05D002747 6.9e-06 54.3 69 42.0
Gohir.D05G259400 Gossypium hirsutum HOM05D002519 ORTHO05D002747 6.9e-06 54.3 61 42.6
TPR.G12433 Trifolium pratense HOM05D002519 ORTHO05D002747 6.9e-06 54.3 65 47.7
CSS0003019 Camellia sinensis var. sinensis HOM05D002519 ORTHO05D002747 9.0e-06 53.9 75 46.7
FAN01G0632 Fragaria x ananassa HOM05D002519 ORTHO05D002747 9.0e-06 53.9 62 51.6
FAN01G2928 Fragaria x ananassa HOM05D002519 ORTHO05D002747 9.0e-06 53.9 62 51.6
Oeu030403.2 Olea europaea HOM05D002519 ORTHO05D002747 9.0e-06 53.9 76 42.1
Sed0001194 Sechium edule HOM05D002519 ORTHO05D002747 9.0e-06 53.9 55 52.7


User provided reference genes

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