Gene: BraA09t39996Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA09t39996Z
- Transcript Identifier BraA09t39996Z
- Gene Type Coding gene
- Location A09 : 46072519-46075143 : negative
Gene Family Information
- ID HOM05D002519
- #Genes/#Species 269/97
- Phylogenetic origin
- ID ORTHO05D002747
- #Genes/#Species 265/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot A0A3P5YHL4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006366 | IEA | GOA Database | transcription by RNA polymerase II | |
| GO:0006366 | IEA | InterPro | transcription by RNA polymerase II | |
| GO:0006367 | IEA | GOA Database | transcription initiation from RNA polymerase II promoter | |
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005674 | IEA | GOA Database | transcription factor TFIIF complex | |
| GO:0005674 | IEA | InterPro | transcription factor TFIIF complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011039 | Transcription Factor IIF, Rap30/Rap74, interaction |
| IPR001841 | Zinc finger, RING-type |
| IPR040450 | TFIIF beta subunit, HTH domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR003196 | Transcription initiation factor IIF, beta subunit |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 15.3.3.4.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta |