Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 8.4e-174 613.6 313 100.0
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 1.6e-108 396.7 320 64.4
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 1.6e-108 396.7 320 64.4
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 1.4e-107 393.7 274 73.4
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 1.8e-107 393.3 300 67.3
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 5.2e-107 391.7 277 69.0
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 8.8e-107 391.0 307 65.8
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 1.2e-106 390.6 348 60.3
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.2e-106 390.6 299 66.9
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 2.0e-106 389.8 300 66.0
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 2.6e-106 389.4 333 63.4
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 9.7e-106 387.5 277 70.4
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 2.8e-105 386.0 313 64.9
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 8.2e-105 384.4 284 69.0
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 4.1e-104 382.1 309 66.3
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 1.2e-103 380.6 277 67.1
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 3.5e-103 379.0 306 65.4
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 5.9e-103 378.3 306 65.7
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 5.9e-103 378.3 373 57.6
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 8.5e-102 374.4 300 66.3
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 1.1e-101 374.0 326 59.8
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 1.5e-101 373.6 277 68.6
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.9e-101 373.2 300 66.0
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 2.5e-101 372.9 322 59.6
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 3.2e-101 372.5 321 59.8
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 5.5e-101 371.7 300 66.0
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 7.2e-101 371.3 274 67.2
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 9.4e-101 370.9 300 63.7
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 1.2e-100 370.5 322 59.3
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 4.7e-100 368.6 362 54.4
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 4.7e-100 368.6 322 59.3
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 8.0e-100 367.9 322 58.1
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 1.0e-99 367.5 326 58.0
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 1.8e-99 366.7 300 62.7
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 1.8e-99 366.7 300 65.7
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 1.8e-99 366.7 300 64.3
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 2.3e-99 366.3 312 60.3
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 5.2e-99 365.2 310 60.6
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 5.2e-99 365.2 300 63.7
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 6.8e-99 364.8 320 59.1
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 2.6e-98 362.8 299 62.5
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 2.6e-98 362.8 346 58.1
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 7.5e-98 361.3 320 57.8
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 1.3e-97 360.5 308 61.0
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 1.3e-97 360.5 324 59.3
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 4.8e-97 358.6 305 61.0
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 6.3e-97 358.2 308 60.7
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.8e-96 356.7 303 60.7
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 3.1e-96 355.9 299 59.2
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 3.1e-96 355.9 350 56.9
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 3.1e-96 355.9 350 56.9
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 4.1e-96 355.5 299 59.2
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 7.0e-96 354.8 350 56.9
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 9.1e-96 354.4 350 56.9
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.0e-95 353.2 350 56.6
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 7.7e-95 351.3 308 59.1
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 7.7e-95 351.3 308 58.4
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 1.0e-94 350.9 299 59.9
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 1.7e-94 350.1 308 59.4
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 1.7e-94 350.1 298 58.4
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 2.3e-94 349.7 300 61.0
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 3.8e-94 349.0 300 61.0
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 3.8e-94 349.0 285 60.0
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 5.0e-94 348.6 308 59.1
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 8.6e-94 347.8 300 60.7
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 8.6e-94 347.8 300 60.7
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 8.6e-94 347.8 300 60.7
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 8.6e-94 347.8 309 57.0
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 1.5e-93 347.1 285 60.0
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 2.5e-93 346.3 277 62.8
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 4.2e-93 345.5 313 59.7
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 4.2e-93 345.5 308 59.1
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 5.5e-93 345.1 277 63.2
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 9.5e-93 344.4 301 60.8
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 1.2e-92 344.0 449 46.5
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 1.6e-92 343.6 300 61.0
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.0e-91 340.9 281 61.2
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.4e-91 340.5 295 58.0
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 1.8e-91 340.1 302 57.0
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 8.9e-91 337.8 304 59.9
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 2.0e-90 336.7 312 55.4
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 3.4e-90 335.9 319 54.9
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 3.1e-88 329.3 326 55.2
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 5.4e-88 328.6 283 59.7
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 7.0e-88 328.2 304 54.6
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 3.5e-87 325.9 303 55.4
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.1e-85 320.9 332 52.4
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 1.5e-85 320.5 298 53.0
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 2.5e-85 319.7 275 59.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 3.3e-85 319.3 332 51.8
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 7.3e-85 318.2 272 58.8
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 1.4e-83 313.9 336 51.5
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 8.3e-81 304.7 279 58.1
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 2.0e-79 300.1 213 69.0
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 2.5e-77 293.1 253 59.3
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 1.6e-76 290.4 335 51.0
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 1.3e-73 280.8 300 50.0
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 1.7e-73 280.4 320 50.0
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.7e-71 273.1 263 53.2
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.0e-70 271.2 320 49.1
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 1.3e-62 244.2 312 41.7
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 3.2e-56 223.0 210 54.8
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.1e-51 208.0 229 53.3
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 2.9e-49 199.9 305 40.7
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 5.3e-43 179.1 266 38.0
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 2.3e-38 163.7 251 36.3
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 3.9e-38 162.9 160 55.6
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 5.1e-38 162.5 172 54.7
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 2.1e-36 157.1 234 38.0
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 5.8e-34 149.1 293 36.9
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 1.0e-33 148.3 265 39.6
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.6e-28 131.0 211 38.4
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 2.1e-28 130.6 236 32.2
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 9.3e-24 115.2 259 30.9
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 2.7e-23 113.6 162 38.3
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 4.8e-20 102.8 120 49.2
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 5.0e-17 92.8 92 53.3
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 4.6e-15 86.3 73 58.9
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 6.1e-15 85.9 86 59.3
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 3.7e-12 76.6 143 37.1
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 6.9e-11 72.4 235 26.0
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 6.5e-09 65.9 55 56.4


User provided reference genes

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