Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 8.7e-207 723.4 364 100.0
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 3.0e-98 362.8 253 70.4
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 4.8e-96 355.5 268 68.7
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 6.9e-95 351.7 267 65.9
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 2.5e-92 343.2 268 65.7
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 4.2e-92 342.4 238 71.0
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 5.5e-92 342.0 267 65.5
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 5.5e-92 342.0 267 65.5
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 4.3e-89 332.4 265 66.0
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 3.1e-87 326.2 260 63.8
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 4.0e-87 325.9 248 66.9
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 5.3e-87 325.5 259 63.7
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 6.9e-87 325.1 238 66.8
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 6.9e-87 325.1 259 64.9
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 1.2e-86 324.3 259 65.3
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.2e-86 324.3 238 66.8
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 1.2e-86 324.3 238 66.8
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 1.5e-86 323.9 263 62.7
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 1.3e-85 320.9 259 63.3
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 1.3e-85 320.9 256 63.3
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 1.7e-85 320.5 259 64.1
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 3.8e-85 319.3 238 66.8
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 1.9e-84 317.0 267 63.3
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 3.2e-84 316.2 258 62.0
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 7.1e-84 315.1 261 61.3
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 2.1e-83 313.5 259 62.2
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 3.5e-83 312.8 256 65.2
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 5.1e-82 308.9 264 62.9
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 6.7e-82 308.5 247 64.8
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 8.7e-82 308.1 236 66.9
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 2.2e-80 303.5 256 60.5
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 6.3e-80 302.0 256 59.4
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 1.4e-79 300.8 275 56.4
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 1.8e-79 300.4 256 59.4
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.8e-79 300.4 238 62.6
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 2.4e-79 300.1 263 60.5
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 5.3e-79 298.9 259 59.1
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 6.9e-79 298.5 259 59.1
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 9.0e-79 298.1 266 59.8
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 1.5e-78 297.4 260 57.7
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 5.9e-78 295.4 265 59.6
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 5.9e-78 295.4 260 57.7
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 7.7e-78 295.0 273 56.8
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 1.7e-77 293.9 256 59.8
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 2.9e-77 293.1 265 58.1
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 3.8e-77 292.7 259 58.3
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 6.5e-77 292.0 259 60.6
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 8.5e-77 291.6 265 58.5
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 1.4e-76 290.8 270 55.2
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 2.5e-76 290.0 263 58.9
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 4.6e-75 285.8 252 58.3
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 6.1e-75 285.4 252 58.7
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 8.8e-74 281.6 242 62.0
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 8.8e-74 281.6 254 58.7
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.1e-73 281.2 265 57.0
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 1.7e-72 277.3 255 58.0
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 1.7e-72 277.3 257 59.1
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 4.8e-72 275.8 254 57.1
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.1e-71 274.6 254 56.3
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 1.4e-71 274.2 260 56.5
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.4e-71 274.2 254 56.7
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 1.8e-71 273.9 238 58.4
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 3.1e-71 273.1 254 56.3
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 5.3e-71 272.3 248 58.1
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 6.9e-71 271.9 262 56.1
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 1.0e-69 268.1 259 55.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.7e-69 267.3 245 57.6
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 1.7e-69 267.3 247 59.1
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 2.9e-69 266.5 253 56.5
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 8.5e-69 265.0 245 57.1
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 2.5e-68 263.5 244 55.7
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 4.2e-68 262.7 208 63.0
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 7.2e-68 261.9 248 58.1
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 9.4e-68 261.5 235 60.0
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.2e-67 261.2 242 57.0
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 3.6e-67 259.6 231 59.7
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 1.8e-66 257.3 208 63.9
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 5.1e-66 255.8 221 61.1
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 6.7e-66 255.4 240 56.7
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 6.7e-66 255.4 257 54.9
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 1.5e-65 254.2 239 55.2
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 1.5e-65 254.2 259 52.1
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 4.4e-65 252.7 192 66.7
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 4.8e-64 249.2 264 52.7
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 4.8e-64 249.2 244 55.3
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 3.1e-63 246.5 196 62.8
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 4.1e-63 246.1 231 56.3
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 1.5e-62 244.2 214 57.5
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 5.0e-61 239.2 208 57.2
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 5.0e-61 239.2 212 59.0
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 3.0e-58 229.9 217 52.1
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 4.4e-57 226.1 224 55.4
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 3.7e-56 223.0 227 51.1
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 9.1e-55 218.4 263 46.4
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 9.1e-55 218.4 238 51.7
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.6e-54 216.9 227 49.8
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 7.7e-54 215.3 248 48.0
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 9.4e-52 208.4 244 47.5
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 5.0e-45 186.0 194 54.1
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 5.7e-41 172.6 187 49.7
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 6.1e-35 152.5 134 57.5
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.7e-32 144.4 135 53.3
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 2.1e-27 127.5 210 40.0
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 3.6e-27 126.7 190 42.1
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 1.8e-26 124.4 178 41.0
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 2.6e-25 120.6 244 35.2
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 5.8e-25 119.4 135 48.9
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 7.3e-20 102.4 198 36.4
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 6.2e-19 99.4 167 44.3
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 2.3e-18 97.4 93 54.8
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 3.9e-13 80.1 154 33.8
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 4.3e-12 76.6 59 62.7


User provided reference genes

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