Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 0.0e+00 1140.6 568 100.0
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 8.6e-185 651.0 755 48.7
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 1.2e-181 640.6 755 48.2
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 6.4e-180 634.8 747 48.2
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 1.1e-179 634.0 754 48.5
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 5.4e-179 631.7 756 48.5
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 1.0e-177 627.5 754 48.4
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 1.1e-174 617.5 762 46.6
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 2.3e-174 616.3 762 46.6
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 1.3e-172 610.5 758 45.9
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 3.2e-171 605.9 754 46.6
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 7.0e-171 604.7 758 45.8
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 9.2e-171 604.4 753 46.5
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 6.0e-170 601.7 762 47.0
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 3.9e-169 599.0 756 47.0
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 3.9e-169 599.0 736 47.7
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 8.6e-169 597.8 749 45.8
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 1.1e-168 597.4 753 45.4
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 7.3e-168 594.7 756 45.6
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 1.6e-167 593.6 751 45.3
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 2.3e-166 589.7 759 45.3
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 6.8e-166 588.2 753 45.7
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 6.8e-166 588.2 752 45.6
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 8.9e-166 587.8 754 45.8
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 8.9e-166 587.8 737 45.6
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 1.2e-165 587.4 754 45.1
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 4.4e-165 585.5 756 45.2
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 9.9e-165 584.3 754 45.4
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 1.7e-164 583.6 757 44.8
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 2.9e-164 582.8 757 44.9
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.2e-163 579.3 769 44.1
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 1.6e-162 577.0 757 43.6
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 6.0e-162 575.1 723 45.6
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 7.8e-162 574.7 753 43.4
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 1.0e-161 574.3 751 45.3
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 1.3e-161 573.9 750 45.6
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 6.6e-161 571.6 708 48.2
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 7.3e-160 568.2 733 47.3
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 7.3e-160 568.2 773 43.7
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 2.8e-159 566.2 761 44.2
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 2.8e-159 566.2 761 44.2
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 4.7e-159 565.5 765 43.3
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 4.7e-159 565.5 691 48.2
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 8.1e-159 564.7 767 44.1
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 8.1e-159 564.7 739 46.1
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 3.1e-158 562.8 735 46.7
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 2.6e-157 559.7 675 48.7
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 6.4e-156 555.1 735 45.3
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 8.4e-156 554.7 706 45.2
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 8.4e-156 554.7 719 44.2
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 1.1e-155 554.3 713 46.0
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.4e-155 553.9 732 45.6
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 1.9e-155 553.5 735 45.2
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 1.9e-155 553.5 762 42.3
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 2.4e-155 553.1 739 45.7
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 3.2e-155 552.7 729 44.0
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 9.2e-155 551.2 708 44.1
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 9.2e-155 551.2 766 43.0
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.0e-153 547.7 753 43.2
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 1.7e-153 547.0 726 44.1
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 1.1e-152 544.3 711 44.9
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 9.6e-152 541.2 796 41.3
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 9.6e-152 541.2 754 42.6
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 9.6e-152 541.2 727 43.7
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 6.2e-151 538.5 773 42.3
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 1.1e-150 537.7 774 41.5
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 1.1e-150 537.7 772 42.9
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.1e-150 537.7 706 45.0
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 1.4e-150 537.3 706 44.6
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 1.4e-150 537.3 704 45.6
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 3.1e-150 536.2 729 43.5
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 6.9e-150 535.0 695 45.2
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 4.4e-149 532.3 706 44.9
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.2e-148 530.0 699 44.2
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 2.4e-147 526.6 736 42.5
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 3.5e-146 522.7 711 43.7
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 5.1e-145 518.8 1003 36.4
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 8.7e-145 518.1 715 42.2
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 3.3e-144 516.2 694 43.2
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 5.6e-144 515.4 715 42.1
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 9.6e-144 514.6 683 43.8
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 8.1e-143 511.5 711 42.2
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 6.9e-142 508.4 723 41.6
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 1.5e-136 490.7 766 40.7
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 2.8e-135 486.5 698 41.3
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 4.8e-135 485.7 733 40.8
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 3.4e-133 479.6 857 37.7
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 1.4e-126 457.6 653 43.2
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 1.4e-126 457.6 687 41.6
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 6.9e-126 455.3 684 41.7
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 1.2e-125 454.5 689 40.8
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 8.4e-124 448.4 960 34.4
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 2.8e-119 433.3 646 42.7
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 1.5e-117 427.6 767 36.9
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 8.5e-116 421.8 677 41.4
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 2.6e-109 400.2 609 41.2
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 5.1e-105 386.0 568 42.8
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.3e-103 381.3 580 41.0
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea HOM05D005074 ORTHO05D006853 3.2e-99 366.7 302 61.3
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.1e-96 358.2 301 62.1
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 4.4e-96 356.3 687 35.2
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 5.7e-96 355.9 553 40.9
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 1.7e-87 327.8 781 29.6
Os03g0293400 Oryza sativa ssp. japonica HOM05D005074 ORTHO05D006853 2.5e-83 313.9 306 52.0
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 1.2e-82 311.6 754 30.9
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 8.6e-76 288.9 513 39.2
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 3.1e-65 253.8 188 63.8
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 9.5e-59 232.3 542 32.7
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 1.8e-57 228.0 638 28.5
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 4.4e-56 223.4 182 61.5
MD05G1095500 Malus domestica HOM05D005074 ORTHO05D006853 7.5e-56 222.6 160 65.0
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.4e-54 217.6 238 51.7
BcaC06g31962 Brassica carinata HOM05D005074 ORTHO05D006853 1.5e-51 208.4 163 61.3
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.6e-50 204.9 223 45.3
Duzib093G1335 Durio zibethinus HOM05D005074 ORTHO05D006853 3.1e-49 200.7 202 52.0
Aa31sc2673G10 Aethionema arabicum HOM05D005074 ORTHO05D006853 8.9e-49 199.1 189 46.0
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.8e-48 196.4 189 55.6
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis HOM05D005074 ORTHO05D006853 1.3e-47 195.3 169 56.8
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 5.4e-46 189.9 123 74.0
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 7.8e-45 186.0 194 44.3
Glyma.U000401 Glycine max HOM05D005074 ORTHO05D006853 3.0e-44 184.1 124 71.8
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 5.1e-44 183.3 254 40.6
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 3.6e-42 177.2 172 53.5
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 4.0e-33 147.1 176 40.3
MCO14G225 Micromonas commoda HOM05D005074 ORTHO05D006853 1.1e-19 102.4 189 34.4
Aa31LG1G19700 Aethionema arabicum HOM05D005074 ORTHO05D023363 1.3e-12 79.0 71 53.5
Cre02.g079150 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 3.0e-12 77.8 155 31.0
PSO675G8941 Papaver somniferum HOM05D005074 ORTHO05D006853 2.5e-11 74.7 120 32.5
Cre05.g239450 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 2.8e-10 71.2 165 29.7
Pp3c2_27000 Physcomitrium patens HOM05D005074 ORTHO05D034455 1.4e-09 68.9 166 24.7
Rhsim05G0219600 Rhododendron simsii HOM05D005074 ORTHO05D006853 4.1e-09 67.4 37 81.1
Hund10966 Selenicereus undatus HOM05D005074 ORTHO05D023363 1.5e-08 65.5 54 55.6
Cfa025975 Carpinus fangiana HOM05D005074 ORTHO05D006853 5.0e-07 60.5 193 29.0
SHI12859 Sapria himalayana HOM05D005074 ORTHO05D023363 5.5e-06 57.0 51 51.0
Aa31LG1G19680 Aethionema arabicum HOM05D005074 ORTHO05D006853 7.1e-06 56.6 38 65.8
Aa31sc1955G10 Aethionema arabicum HOM05D005074 ORTHO05D023363 7.1e-06 56.6 38 60.5
Aa31sc2119G10 Aethionema arabicum HOM05D005074 ORTHO05D023363 7.1e-06 56.6 38 60.5


User provided reference genes

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