Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1166.1 Carica papaya HOM05D001734 ORTHO05D003483 1.7e-210 735.7 370 100.0
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 2.9e-149 532.3 371 72.8
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.4e-148 530.0 371 72.5
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 2.1e-147 526.2 371 71.7
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.8e-146 523.1 370 71.4
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 4.3e-145 518.5 371 70.1
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 4.8e-144 515.0 370 69.7
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.0e-141 507.3 372 70.2
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 6.5e-141 504.6 371 70.1
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.1e-140 503.8 371 67.7
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 2.5e-140 502.7 371 67.7
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 5.5e-140 501.5 370 67.3
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 4.6e-139 498.4 371 68.2
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.8e-138 496.5 370 67.8
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 4.3e-137 491.9 371 65.2
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.3e-136 490.3 371 66.0
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.2e-136 489.6 371 65.8
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 1.1e-135 487.3 371 67.9
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.4e-135 486.9 371 66.6
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 3.1e-135 485.7 371 65.2
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 5.3e-135 485.0 375 65.1
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 6.9e-135 484.6 371 66.0
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.5e-134 483.4 370 66.2
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 5.9e-134 481.5 371 64.7
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 1.3e-133 480.3 370 64.6
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.7e-133 479.9 374 67.6
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 3.8e-133 478.8 371 64.4
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 5.0e-133 478.4 370 65.4
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 8.5e-133 477.6 371 66.6
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 8.5e-133 477.6 370 65.4
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.4e-132 476.9 370 64.6
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 1.9e-132 476.5 370 64.3
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 5.5e-132 474.9 371 64.7
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 7.2e-132 474.6 370 65.1
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.2e-131 473.8 372 65.3
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.2e-131 473.8 372 64.2
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.6e-131 473.4 370 64.3
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 2.7e-131 472.6 370 65.1
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 3.0e-130 469.2 370 63.5
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 5.1e-130 468.4 371 63.3
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 6.7e-130 468.0 371 63.3
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 8.8e-130 467.6 370 64.1
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 5.7e-129 464.9 371 64.7
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 2.4e-127 459.5 370 62.2
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 2.4e-127 459.5 370 62.2
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 5.3e-127 458.4 371 62.3
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 9.1e-127 457.6 370 63.5
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.2e-126 457.2 370 64.1
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.2e-126 457.2 371 62.3
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 2.0e-126 456.4 370 63.0
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 3.4e-126 455.7 354 64.4
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 4.5e-126 455.3 370 62.2
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 6.5e-125 451.4 339 67.3
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 4.2e-124 448.7 371 62.5
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 5.5e-124 448.4 398 59.8
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 7.9e-123 444.5 370 62.7
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 1.4e-122 443.7 373 62.7
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 2.0e-121 439.9 375 58.9
Hund02745 Selenicereus undatus HOM05D001734 ORTHO05D003483 5.7e-121 438.3 370 61.9
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 4.8e-120 435.3 331 64.4
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 1.1e-119 434.1 372 59.9
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 3.1e-119 432.6 331 63.7
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 5.3e-119 431.8 371 59.3
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 2.0e-118 429.9 371 59.0
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 2.1e-115 419.9 373 59.0
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.1e-115 419.9 373 59.0
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.7e-115 418.7 373 59.0
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 3.5e-110 402.5 380 55.3
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 5.9e-110 401.7 304 64.1
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 2.9e-109 399.4 371 57.7
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 8.5e-109 397.9 377 56.2
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.1e-107 393.3 334 59.9
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 9.8e-105 384.4 285 66.3
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 1.0e-101 374.4 371 51.2
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 2.5e-100 369.8 280 66.4
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 8.8e-98 361.3 378 50.5
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.3e-96 357.5 244 71.7
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 5.9e-94 348.6 370 47.8
CDE07G0247 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.9e-92 343.6 299 55.5
Migut.C00312 Erythranthe guttata HOM05D001734 ORTHO05D003483 4.2e-92 342.4 332 55.1
Nitab4.5_0000984g0080 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.2e-91 340.9 342 53.8
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 1.4e-90 337.4 372 49.2
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 6.4e-88 328.6 240 67.5
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 7.0e-87 325.1 372 43.8
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 1.7e-85 320.5 267 61.0
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 3.5e-70 269.6 210 64.3
Rhsim06G0125200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.0e-69 268.1 253 56.5
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 4.0e-66 256.1 371 39.9
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 1.9e-60 237.3 371 37.7
COL.COLO4_30229 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.1e-58 231.5 234 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 3.4e-57 226.5 370 37.6
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 1.1e-50 204.9 220 47.3
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 1.8e-50 204.1 197 53.8
Rhsim02G0151200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.2e-49 201.4 246 48.0
arahy.Tifrunner.gnm1.ann1.BK2P93 Arachis hypogaea HOM05D001734 ORTHO05D003483 7.4e-36 155.6 190 46.8
arahy.Tifrunner.gnm1.ann1.1I6Y5K Arachis hypogaea HOM05D001734 ORTHO05D003483 3.7e-35 153.3 106 65.1
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 6.2e-35 152.5 123 65.0
CBR_g286 Chara braunii HOM05D000004 ORTHO05D000002 9.0e-34 148.7 157 48.4
Rhsim06G0125100 Rhododendron simsii HOM05D001734 ORTHO05D003483 9.0e-34 148.7 123 64.2
SHI17018 Sapria himalayana HOM05D000105 ORTHO05D000023 3.4e-33 146.7 178 44.4
TPR.G5903 Trifolium pratense HOM05D001734 ORTHO05D003483 3.9e-29 133.3 93 69.9
arahy.Tifrunner.gnm1.ann1.EMU6Q2 Arachis hypogaea HOM05D001734 ORTHO05D003483 8.2e-27 125.6 116 53.4
MD14G1180200 Malus domestica HOM05D001734 ORTHO05D003483 3.1e-26 123.6 95 65.3
TPR.G21158 Trifolium pratense HOM05D001734 ORTHO05D003483 9.0e-18 95.5 73 60.3
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 3.4e-17 93.6 85 58.8
SEGI_06250 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 4.5e-17 93.2 87 50.6
PRCOL_00001369 Prasinoderma coloniale HOM05D001734 ORTHO05D003483 3.3e-12 77.0 236 23.7
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 5.9e-09 66.2 65 52.3


User provided reference genes

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