Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c35212 Carica papaya HOM05D000203 ORTHO05D000135 1.6e-28 128.6 60 100.0
Cpa.g.sc439.8 Carica papaya HOM05D000203 ORTHO05D000135 1.6e-28 128.6 60 100.0
Cpa.g.sc758.5 Carica papaya HOM05D000203 ORTHO05D000135 1.6e-28 128.6 60 100.0
Cpa.g.c35230 Carica papaya HOM05D000203 ORTHO05D000135 3.5e-28 127.5 60 98.3
Cpa.g.sc348.5 Carica papaya HOM05D000203 ORTHO05D000135 3.5e-28 127.5 60 98.3
Cpa.g.c26687.4 Carica papaya HOM05D000203 ORTHO05D000135 7.8e-28 126.3 60 98.3
Cpa.g.sc2593.1 Carica papaya HOM05D000203 ORTHO05D000135 3.4e-23 110.9 76 75.0
Cpa.g.c38155.1 Carica papaya HOM05D000203 ORTHO05D000135 2.9e-22 107.8 50 98.0
Cpa.g.c24748.5 Carica papaya HOM05D000203 ORTHO05D000135 8.3e-22 106.3 50 96.0
Cpa.g.c33091.3 Carica papaya HOM05D000203 ORTHO05D000135 8.3e-22 106.3 50 96.0
Cpa.g.c35157.2 Carica papaya HOM05D000203 ORTHO05D000135 1.4e-21 105.5 50 96.0
Cpa.g.c37082 Carica papaya HOM05D000203 ORTHO05D000135 3.2e-21 104.4 50 96.0
Cpa.g.sc654.5 Carica papaya HOM05D000203 ORTHO05D000135 3.2e-21 104.4 50 96.0
Cpa.g.c38552 Carica papaya HOM05D000203 ORTHO05D000135 7.0e-21 103.2 50 94.0
Cpa.g.sc348.9 Carica papaya HOM05D000203 ORTHO05D000135 1.2e-20 102.4 48 95.8
Cpa.g.sc758.1 Carica papaya HOM05D000203 ORTHO05D000135 1.2e-20 102.4 50 94.0
Cpa.g.c27553.3 Carica papaya HOM05D000203 ORTHO05D000135 1.6e-20 102.1 50 92.0
Cpa.g.sc347.10 Carica papaya HOM05D000203 ORTHO05D000135 1.6e-20 102.1 50 94.0
Cpa.g.c31904 Carica papaya HOM05D000203 ORTHO05D000135 3.5e-20 100.9 50 92.0
Cpa.g.c36403 Carica papaya HOM05D000203 ORTHO05D000135 3.5e-20 100.9 50 92.0
Cpa.g.sc695.8 Carica papaya HOM05D000203 ORTHO05D000135 3.5e-20 100.9 50 92.0
Cpa.g.c37107 Carica papaya HOM05D000203 ORTHO05D000135 2.3e-19 98.2 50 90.0
Cpa.g.sc505.5 Carica papaya HOM05D000203 ORTHO05D000135 3.0e-19 97.8 50 92.0
Cpa.g.sc347.2 Carica papaya HOM05D000203 ORTHO05D000135 6.6e-19 96.7 50 90.0
Cpa.g.sc695.2 Carica papaya HOM05D000203 ORTHO05D000135 6.6e-19 96.7 50 90.0
Cpa.g.c37489 Carica papaya HOM05D000203 ORTHO05D000135 1.5e-18 95.5 60 83.3
Cpa.g.sc106.21 Carica papaya HOM05D000203 ORTHO05D000135 1.8e-16 88.6 47 85.1
Cpa.g.c35510 Carica papaya HOM05D000203 ORTHO05D000135 2.9e-14 81.3 75 53.3
Cpa.g.c33091.2 Carica papaya HOM05D000203 ORTHO05D000135 1.1e-13 79.3 82 50.0
Cpa.g.c35697 Carica papaya HOM05D000203 ORTHO05D000135 1.4e-13 79.0 82 48.8
Cpa.g.c30114.1 Carica papaya HOM05D000203 ORTHO05D000135 4.1e-13 77.4 50 66.0
Cpa.g.sc505.2 Carica papaya HOM05D000203 ORTHO05D000135 7.1e-13 76.6 50 68.0
Cpa.g.sc695.1 Carica papaya HOM05D000203 ORTHO05D000135 7.1e-13 76.6 50 66.0
Cpa.g.sc654.4 Carica papaya HOM05D000203 ORTHO05D000135 1.2e-12 75.9 50 68.0
Cpa.g.c37271 Carica papaya HOM05D000203 ORTHO05D000135 1.6e-12 75.5 50 64.0
Cpa.g.c27313 Carica papaya HOM05D000203 ORTHO05D000135 2.1e-12 75.1 50 64.0
Cpa.g.c41453 Carica papaya HOM05D000203 ORTHO05D000135 2.1e-12 75.1 88 44.3
Cpa.g.c28241.1 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 64.0
Cpa.g.c33038 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 64.0
Cpa.g.c35157.1 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 64.0
Cpa.g.c35713 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 64.0
Cpa.g.sc347.11 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 66.0
Cpa.g.sc347.7 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 64.0
Cpa.g.sc758.2 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 64.0
Cpa.g.sc758.4 Carica papaya HOM05D000203 ORTHO05D000135 2.7e-12 74.7 50 64.0
Cpa.g.sc54.68 Carica papaya HOM05D000203 ORTHO05D000135 3.5e-12 74.3 50 68.0
Cpa.g.sc695.7 Carica papaya HOM05D000203 ORTHO05D000135 3.5e-12 74.3 50 64.0
Cpa.g.c24748.4 Carica papaya HOM05D000203 ORTHO05D000135 7.8e-12 73.2 50 62.0
Cpa.g.sc625.4 Carica papaya HOM05D000203 ORTHO05D000135 7.8e-12 73.2 50 64.0
Cpa.g.c30005.4 Carica papaya HOM05D000203 ORTHO05D000135 1.3e-11 72.4 50 62.0
Cpa.g.c30689 Carica papaya HOM05D000203 ORTHO05D000135 1.3e-11 72.4 50 62.0
Cpa.g.sc439.7 Carica papaya HOM05D000203 ORTHO05D000135 1.3e-11 72.4 50 62.0
Cpa.g.sc654.6 Carica papaya HOM05D000203 ORTHO05D000135 1.3e-11 72.4 50 62.0
Cpa.g.c35751 Carica papaya HOM05D000203 ORTHO05D000135 1.7e-11 72.0 50 62.0
Sabra17G0031900 Salix brachista HOM05D000203 ORTHO05D000135 1.7e-11 72.0 50 68.0
Potri.017G047300 Populus trichocarpa HOM05D000203 ORTHO05D000135 3.0e-11 71.2 50 68.0
Cpa.g.c26687.3 Carica papaya HOM05D000203 ORTHO05D000135 3.9e-11 70.9 50 60.0
Cpa.g.c41623 Carica papaya HOM05D000203 ORTHO05D000135 3.9e-11 70.9 50 64.0
Cpa.g.sc348.4 Carica papaya HOM05D000203 ORTHO05D000135 3.9e-11 70.9 50 60.0
Cpa.g.sc505.4 Carica papaya HOM05D000203 ORTHO05D000135 5.1e-11 70.5 50 62.0
Cpa.g.sc695.5 Carica papaya HOM05D000203 ORTHO05D000135 5.1e-11 70.5 50 62.0
Cpa.g.sc1455.2 Carica papaya HOM05D000203 ORTHO05D000135 6.6e-11 70.1 50 60.0
Cpa.g.sc347.8 Carica papaya HOM05D000203 ORTHO05D000135 8.6e-11 69.7 44 63.6
Atru.chr6.1457 Acer truncatum HOM05D000203 ORTHO05D000135 1.5e-10 68.9 50 66.0
Cpa.g.c30908.1 Carica papaya HOM05D000203 ORTHO05D000135 1.5e-10 68.9 49 59.2
Cpa.g.sc106.18 Carica papaya HOM05D000203 ORTHO05D000135 1.5e-10 68.9 50 62.0
Atru.chr5.2250 Acer truncatum HOM05D000203 ORTHO05D000135 3.3e-10 67.8 50 62.0
FvH4_2g03030 Fragaria vesca HOM05D000203 ORTHO05D000135 3.3e-10 67.8 51 62.7
FAN15G0664 Fragaria x ananassa HOM05D004093 ORTHO05D004981 3.3e-10 67.8 51 62.7
FAN24G1168 Fragaria x ananassa HOM05D000203 ORTHO05D000135 3.3e-10 67.8 51 62.7
FAN27G2405 Fragaria x ananassa HOM05D000203 ORTHO05D000135 3.3e-10 67.8 51 62.7
Cpa.g.sc505.6 Carica papaya HOM05D000203 ORTHO05D000135 5.6e-10 67.0 50 60.0
Potri.007G113800 Populus trichocarpa HOM05D000203 ORTHO05D000135 5.6e-10 67.0 50 66.0
Cpa.g.c38604 Carica papaya HOM05D000203 ORTHO05D000135 7.3e-10 66.6 45 62.2
Cpa.g.sc106.19 Carica papaya HOM05D000203 ORTHO05D000135 7.3e-10 66.6 50 58.0
Cpa.g.sc348.3 Carica papaya HOM05D000203 ORTHO05D000135 9.5e-10 66.2 45 62.2
CiPaw.05G021900 Carya illinoinensis HOM05D000203 ORTHO05D000135 9.5e-10 66.2 50 58.0
Manes.10G100400 Manihot esculenta HOM05D000203 ORTHO05D000135 9.5e-10 66.2 50 66.0
Ciclev10030142m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.2e-09 65.9 50 58.0
ClCG10G009960 Citrullus lanatus HOM05D000203 ORTHO05D000135 2.1e-09 65.1 50 60.0
MELO3C018030.2 Cucumis melo HOM05D000203 ORTHO05D000135 2.1e-09 65.1 50 60.0
CsaV3_4G000010 Cucumis sativus L. HOM05D000203 ORTHO05D000135 2.1e-09 65.1 50 60.0
RcHm_v2.0_Chr6g0247821 Rosa chinensis HOM05D000203 ORTHO05D000135 2.1e-09 65.1 52 57.7
Lj6g0001263 Lotus japonicus HOM05D000203 ORTHO05D000135 2.8e-09 64.7 50 54.0
Sabra07G0092900 Salix brachista HOM05D000203 ORTHO05D000135 2.8e-09 64.7 50 58.0
Lj1g0003732 Lotus japonicus HOM05D000203 ORTHO05D000135 3.6e-09 64.3 50 54.0
Atru.chr12.1516 Acer truncatum HOM05D000203 ORTHO05D000135 4.7e-09 63.9 50 62.0
Atru.chr12.1519 Acer truncatum HOM05D000203 ORTHO05D000135 4.7e-09 63.9 50 62.0
Cpa.g.sc106.20 Carica papaya HOM05D000203 ORTHO05D000135 4.7e-09 63.9 50 56.0
Sabra09G0064900 Salix brachista HOM05D000203 ORTHO05D000135 8.1e-09 63.2 50 62.0
QL11p028776 Quercus lobata HOM05D000203 ORTHO05D000135 1.1e-08 62.8 50 56.0
Lj9C337T6 Lonicera japonica HOM05D000203 ORTHO05D000135 1.4e-08 62.4 50 48.0
Peaxi162Scf00016g00324 Petunia axillaris HOM05D000203 ORTHO05D000135 1.8e-08 62.0 49 51.0
Potri.009G084200 Populus trichocarpa HOM05D000203 ORTHO05D000135 1.8e-08 62.0 50 60.0
Sabra09G0064800 Salix brachista HOM05D000203 ORTHO05D000135 1.8e-08 62.0 50 54.0
Gohir.D02G235000 Gossypium hirsutum HOM05D000203 ORTHO05D000135 2.3e-08 61.6 50 56.0
Gorai.005G263100 Gossypium raimondii HOM05D000203 ORTHO05D000135 2.3e-08 61.6 50 56.0
Sed0020653 Sechium edule HOM05D000203 ORTHO05D000135 2.3e-08 61.6 50 56.0
Ca_17913_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 3.1e-08 61.2 50 56.0
Prupe.8G151900 Prunus persica HOM05D000203 ORTHO05D000135 3.1e-08 61.2 54 53.7
Dinv12564 Davidia involucrata HOM05D000203 ORTHO05D000135 5.2e-08 60.5 49 55.1
Gohir.A03G213500 Gossypium hirsutum HOM05D000203 ORTHO05D000135 5.2e-08 60.5 50 54.0
Ca_16299_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 6.8e-08 60.1 50 52.0
Sed0009196 Sechium edule HOM05D000203 ORTHO05D000135 6.8e-08 60.1 50 56.0
Thecc.02G031800 Theobroma cacao HOM05D000203 ORTHO05D000135 6.8e-08 60.1 50 58.0
VMungo0720G1003 Vigna mungo HOM05D000203 ORTHO05D000135 6.8e-08 60.1 50 56.0
Cpa.g.sc439.1 Carica papaya HOM05D000203 ORTHO05D000135 8.9e-08 59.7 39 64.1
Cpa.g.sc851.1 Carica papaya HOM05D000203 ORTHO05D000135 8.9e-08 59.7 39 64.1
Manes.07G036500 Manihot esculenta HOM05D000203 ORTHO05D000135 1.2e-07 59.3 51 51.0
Phvul.007G048000 Phaseolus vulgaris HOM05D000203 ORTHO05D000135 1.2e-07 59.3 50 56.0
ECA238G3327 Erigeron canadensis HOM05D000203 ORTHO05D000135 1.5e-07 58.9 49 55.1
THA.LOC104827420 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.5e-07 58.9 52 53.8
TWI75G1001 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.5e-07 58.9 50 56.0
Lalb_Chr21g0307931 Lupinus albus HOM05D000203 ORTHO05D000135 2.0e-07 58.5 50 54.0
MD10G1112300 Malus domestica HOM05D000203 ORTHO05D000135 2.0e-07 58.5 54 53.7
Manes.07G051700 Manihot esculenta HOM05D000203 ORTHO05D000135 2.0e-07 58.5 50 58.0
Potri.009G084100 Populus trichocarpa HOM05D000203 ORTHO05D000135 2.0e-07 58.5 50 52.0
TPR.G3865 Trifolium pratense HOM05D000203 ORTHO05D000135 2.0e-07 58.5 50 52.0
arahy.Tifrunner.gnm1.ann1.BPE0YX Arachis hypogaea HOM05D000203 ORTHO05D000135 2.6e-07 58.2 51 51.0
arahy.Tifrunner.gnm1.ann1.CPT3GD Arachis hypogaea HOM05D000203 ORTHO05D000135 2.6e-07 58.2 51 51.0
DCAR_022542 Daucus carota HOM05D000203 ORTHO05D000135 2.6e-07 58.2 50 48.0
Cpa.g.c38884.2 Carica papaya HOM05D000203 ORTHO05D000135 4.4e-07 57.4 46 56.5
Eucgr.I02506 Eucalyptus grandis HOM05D000203 ORTHO05D000135 4.4e-07 57.4 51 54.9
Manes.07G039300 Manihot esculenta HOM05D000203 ORTHO05D000135 4.4e-07 57.4 52 50.0
Medtr3g080940 Medicago truncatula HOM05D000203 ORTHO05D000135 4.4e-07 57.4 50 50.0
CSS0035867 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 5.8e-07 57.0 50 54.0
Ciclev10030387m.g Citrus clementina HOM05D000203 ORTHO05D000135 5.8e-07 57.0 52 55.8
Eucgr.H04834 Eucalyptus grandis HOM05D000203 ORTHO05D000135 5.8e-07 57.0 50 54.0
Glyma.10G254800 Glycine max HOM05D000203 ORTHO05D000135 5.8e-07 57.0 50 52.0
Psat5g214600 Pisum sativum HOM05D000203 ORTHO05D000135 5.8e-07 57.0 50 50.0
CSS0021382 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 7.6e-07 56.6 50 50.0
CSS0029942 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 7.6e-07 56.6 50 50.0
Glyma.20G136700 Glycine max HOM05D000203 ORTHO05D000135 7.6e-07 56.6 50 54.0
Lsat_1_v5_gn_2_112180 Lactuca sativa HOM05D000203 ORTHO05D000135 7.6e-07 56.6 49 51.0
THA.LOC104809103 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 7.6e-07 56.6 52 53.8
TAR285G0001 Trochodendron aralioides HOM05D000203 ORTHO05D000135 7.6e-07 56.6 50 48.0
CSS0011968 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 9.9e-07 56.2 50 50.0
Glyma.10G254600 Glycine max HOM05D000203 ORTHO05D000135 9.9e-07 56.2 50 52.0
Nitab4.5_0002011g0080 Nicotiana tabacum HOM05D000203 ORTHO05D000135 9.9e-07 56.2 50 48.0
TWI36G0397 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 9.9e-07 56.2 50 54.0
TWI59G0047 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 9.9e-07 56.2 50 52.0
Duzib132G0793 Durio zibethinus HOM05D000203 ORTHO05D000135 1.3e-06 55.8 50 52.0
GSVIVG01037034001 Vitis vinifera HOM05D000203 ORTHO05D000135 1.3e-06 55.8 48 54.2
Ciclev10013802m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.7e-06 55.5 51 52.9
Lj1g0008794 Lotus japonicus HOM05D000203 ORTHO05D000135 1.7e-06 55.5 50 50.0
Lj2g0019383 Lotus japonicus HOM05D000203 ORTHO05D000135 1.7e-06 55.5 50 54.0
Thecc.09G236200 Theobroma cacao HOM05D000203 ORTHO05D000135 1.7e-06 55.5 50 50.0
TPR.G3858 Trifolium pratense HOM05D000203 ORTHO05D000135 1.7e-06 55.5 50 48.0
GSVIVG01037024001 Vitis vinifera HOM05D000203 ORTHO05D000135 1.7e-06 55.5 48 52.1
GSVIVG01037031001 Vitis vinifera HOM05D000203 ORTHO05D000135 1.7e-06 55.5 50 48.0
QL11p028766 Quercus lobata HOM05D000203 ORTHO05D000135 2.2e-06 55.1 50 50.0
Thecc.02G031900 Theobroma cacao HOM05D000203 ORTHO05D000135 2.2e-06 55.1 50 48.0
Cpa.g.sc695.6 Carica papaya HOM05D000203 ORTHO05D000135 2.9e-06 54.7 66 54.5
MD05G1107900 Malus domestica HOM05D000203 ORTHO05D000135 2.9e-06 54.7 54 51.9
Oeu017584.1 Olea europaea HOM05D000203 ORTHO05D000135 2.9e-06 54.7 49 49.0
THA.LOC104826501 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 2.9e-06 54.7 52 48.1
CAN.G504.4 Capsicum annuum HOM05D000203 ORTHO05D000135 3.7e-06 54.3 49 49.0
PGR042G3915 Punica granatum HOM05D000203 ORTHO05D000135 3.7e-06 54.3 50 50.0
CiPaw.06G163000 Carya illinoinensis HOM05D000203 ORTHO05D000135 4.9e-06 53.9 52 46.2
Oeu017586.1 Olea europaea HOM05D000203 ORTHO05D000135 4.9e-06 53.9 49 49.0
Oeu025302.1 Olea europaea HOM05D000203 ORTHO05D000135 6.4e-06 53.5 49 46.9
Psat5g108920 Pisum sativum HOM05D000203 ORTHO05D000135 6.4e-06 53.5 50 46.0
Solyc01g106720.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 6.4e-06 53.5 50 44.0
Sopen01g049040 Solanum pennellii HOM05D000203 ORTHO05D000135 6.4e-06 53.5 50 44.0
PGSC0003DMG400005131 Solanum tuberosum HOM05D000203 ORTHO05D000135 6.4e-06 53.5 50 44.0
MD10G1112400 Malus domestica HOM05D000203 ORTHO05D000135 8.4e-06 53.1 53 45.3
Nitab4.5_0000047g0250 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.4e-06 53.1 50 46.0
Nitab4.5_0005046g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.4e-06 53.1 50 46.0
Oeu051193.1 Olea europaea HOM05D000203 ORTHO05D000135 8.4e-06 53.1 49 49.0
Prupe.8G152000 Prunus persica HOM05D000203 ORTHO05D000135 8.4e-06 53.1 55 49.1
Rhsim11G0149000 Rhododendron simsii HOM05D000203 ORTHO05D000135 8.4e-06 53.1 50 46.0
TAR628G1507 Trochodendron aralioides HOM05D000203 ORTHO05D000135 8.4e-06 53.1 45 44.4


User provided reference genes

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