Gene: Sopen01g049040
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g049040
- Transcript Identifier Sopen01g049040.1
- Gene Type Coding gene
- Location Spenn-ch01 : 105113655-105114248 : negative
Gene Family Information
- ID HOM05D000203
- #Genes/#Species 1948/93
- Phylogenetic origin
- ID ORTHO05D000135
- #Genes/#Species 1747/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen01g049040.1
Descriptions
- Description AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. | AGAMOUS-like 62 (AGL62) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: cellularization of endosperm, endosperm development | LOCATED IN: nucleus | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box | BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000012 | ISO | PLAZA Integrative Orthology | regulation of auxin polar transport | AT5G60440 |
| GO:0009960 | ISO | PLAZA Integrative Orthology | endosperm development | AT5G60440 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G60440 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G36590 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |