Gene: PGR042G3915
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G3915
- Transcript Identifier PGR042G3915.01
- Gene Type Coding gene
- Location NC_045130.1 : 10133491-10134165 : negative
Gene Family Information
- ID HOM05D000203
- #Genes/#Species 1948/93
- Phylogenetic origin
- ID ORTHO05D000135
- #Genes/#Species 1747/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pid XP_031394547.1
- name LOC116205976
- name XM_031538687.1
- id gene-LOC116205976
- uniprot A0A218VXP6
Descriptions
- product agamous-like MADS-box protein AGL61
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G65360 |
| GO:0009559 | ISO | PLAZA Integrative Orthology | embryo sac central cell differentiation | AT2G24840 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G65360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G24840 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0043078 | ISO | PLAZA Integrative Orthology | polar nucleus | AT2G24840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |