Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c30793.3 Carica papaya HOM05D004712 ORTHO05D005306 3.7e-162 574.7 272 100.0
GSVIVG01035336001 Vitis vinifera HOM05D004712 ORTHO05D005306 1.3e-61 240.7 130 85.4
TAR624G0834 Trochodendron aralioides HOM05D004712 ORTHO05D005306 2.2e-61 240.0 130 86.2
Hma1.2p1_1266F.1_g271360 Hydrangea macrophylla HOM05D004712 ORTHO05D005306 4.9e-61 238.8 130 83.8
Lj7A695G32 Lonicera japonica HOM05D004712 ORTHO05D005306 6.4e-61 238.4 132 80.3
Dinv23416 Davidia involucrata HOM05D004712 ORTHO05D005306 8.3e-61 238.0 130 83.8
CsaV3_2G025770 Cucumis sativus L. HOM05D004712 ORTHO05D005306 1.4e-60 237.3 130 84.6
Prupe.1G416100 Prunus persica HOM05D004712 ORTHO05D005306 1.8e-60 236.9 130 83.8
MELO3C010771.2 Cucumis melo HOM05D004712 ORTHO05D005306 2.4e-60 236.5 132 83.3
Cfa017921 Carpinus fangiana HOM05D004712 ORTHO05D005306 3.2e-60 236.1 130 83.1
Haze_18228 Corylus avellana HOM05D004712 ORTHO05D005306 5.4e-60 235.3 130 83.1
CANSAT25G2372 Cannabis sativa HOM05D004712 ORTHO05D005306 9.2e-60 234.6 130 80.0
Atru.chr7.2032 Acer truncatum HOM05D004712 ORTHO05D005306 1.2e-59 234.2 130 80.0
Thecc.09G050100 Theobroma cacao HOM05D004712 ORTHO05D005306 2.7e-59 233.0 197 62.4
Lj5g0015176 Lotus japonicus HOM05D004712 ORTHO05D005306 4.6e-59 232.3 193 62.2
ClCG08G016850 Citrullus lanatus HOM05D004712 ORTHO05D005306 5.9e-59 231.9 130 80.8
Ciclev10008867m.g Citrus clementina HOM05D004712 ORTHO05D005306 5.9e-59 231.9 130 79.2
Actinidia21731 Actinidia chinensis HOM05D004712 ORTHO05D005306 7.8e-59 231.5 130 79.2
Duzib150G0899 Durio zibethinus HOM05D004712 ORTHO05D005306 1.3e-58 230.7 130 80.0
Sed0015351 Sechium edule HOM05D004712 ORTHO05D005306 1.3e-58 230.7 130 83.8
vmacro05273 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 1.3e-58 230.7 132 81.8
Migut.A00161 Erythranthe guttata HOM05D004712 ORTHO05D005306 3.9e-58 229.2 130 79.2
HanXRQChr17g0538901 Helianthus annuus HOM05D004712 ORTHO05D005306 3.9e-58 229.2 130 78.5
Manes.03G046000 Manihot esculenta HOM05D004712 ORTHO05D005306 3.9e-58 229.2 130 80.0
Aqoxy7G03946 Aquilegia oxysepala HOM05D004712 ORTHO05D005306 5.0e-58 228.8 130 76.9
CSS0005003 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 5.0e-58 228.8 130 81.5
CiPaw.15G042700 Carya illinoinensis HOM05D004712 ORTHO05D005306 5.0e-58 228.8 131 79.4
Solyc08g065880.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 5.0e-58 228.8 130 77.7
Sopen08g019580 Solanum pennellii HOM05D004712 ORTHO05D005306 5.0e-58 228.8 130 77.7
CSS0042817 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 8.6e-58 228.0 195 62.6
Eucgr.C00628 Eucalyptus grandis HOM05D004712 ORTHO05D005306 8.6e-58 228.0 130 79.2
Peaxi162Scf00840g00117 Petunia axillaris HOM05D004712 ORTHO05D005306 8.6e-58 228.0 130 79.2
Sabra18G0050600 Salix brachista HOM05D004712 ORTHO05D005306 8.6e-58 228.0 130 79.2
MD15G1062100 Malus domestica HOM05D004712 ORTHO05D005306 1.1e-57 227.6 130 80.0
Duzib168G2010 Durio zibethinus HOM05D004712 ORTHO05D005306 1.5e-57 227.3 133 79.7
Potri.018G058900 Populus trichocarpa HOM05D004712 ORTHO05D005306 1.5e-57 227.3 130 80.0
QL02p001773 Quercus lobata HOM05D004712 ORTHO05D005306 1.5e-57 227.3 130 80.8
SalBow4G3242 Salvia bowleyana HOM05D004712 ORTHO05D005306 1.5e-57 227.3 130 76.9
COL.COLO4_21017 Corchorus olitorius HOM05D004712 ORTHO05D005306 1.9e-57 226.9 130 79.2
CAN.G20.6 Capsicum annuum HOM05D004712 ORTHO05D005306 2.5e-57 226.5 141 73.0
Lsat_1_v5_gn_3_27140 Lactuca sativa HOM05D004712 ORTHO05D005306 2.5e-57 226.5 130 76.2
Lalb_Chr22g0355941 Lupinus albus HOM05D004712 ORTHO05D005306 2.5e-57 226.5 130 78.5
Nn6g35377 Nelumbo nucifera HOM05D004712 ORTHO05D005306 2.5e-57 226.5 130 80.8
Nitab4.5_0005029g0040 Nicotiana tabacum HOM05D004712 ORTHO05D005306 2.5e-57 226.5 130 77.7
ECA246G0363 Erigeron canadensis HOM05D004712 ORTHO05D005306 3.3e-57 226.1 130 76.9
Gohir.A05G044400 Gossypium hirsutum HOM05D004712 ORTHO05D005306 3.3e-57 226.1 130 79.2
THA.LOC104803739 Tarenaya hassleriana HOM05D004712 ORTHO05D005306 3.3e-57 226.1 130 80.0
Cc08_g10100 Coffea canephora HOM05D004712 ORTHO05D005306 4.3e-57 225.7 130 76.2
MD08G1074400 Malus domestica HOM05D004712 ORTHO05D005306 5.6e-57 225.3 130 80.0
Gohir.D05G046000 Gossypium hirsutum HOM05D004712 ORTHO05D005306 7.3e-57 224.9 130 78.5
Nitab4.5_0000359g0220 Nicotiana tabacum HOM05D004712 ORTHO05D005306 7.3e-57 224.9 130 77.7
Nn6g35381 Nelumbo nucifera HOM05D004712 ORTHO05D005306 1.2e-56 224.2 137 77.4
Dinv30410 Davidia involucrata HOM05D004712 ORTHO05D005306 1.6e-56 223.8 130 80.0
DCAR_004451 Daucus carota HOM05D004712 ORTHO05D005306 2.1e-56 223.4 130 80.0
PSO210G0832 Papaver somniferum HOM05D004712 ORTHO05D005306 2.1e-56 223.4 130 75.4
Manes.16G077100 Manihot esculenta HOM05D004712 ORTHO05D005306 2.8e-56 223.0 130 80.8
Potri.006G234000 Populus trichocarpa HOM05D004712 ORTHO05D005306 3.6e-56 222.6 131 78.6
TPR.G13042 Trifolium pratense HOM05D004712 ORTHO05D005306 4.7e-56 222.2 195 59.0
Aa31LG5G9770 Aethionema arabicum HOM05D004712 ORTHO05D005306 8.0e-56 221.5 131 78.6
CARHR115280 Cardamine hirsuta HOM05D004712 ORTHO05D005306 1.4e-55 220.7 131 75.6
PSO210G7282 Papaver somniferum HOM05D004712 ORTHO05D005306 1.8e-55 220.3 130 74.6
VMungo0647G0552 Vigna mungo HOM05D004712 ORTHO05D005306 1.8e-55 220.3 130 78.5
arahy.Tifrunner.gnm1.ann1.289CQF Arachis hypogaea HOM05D004712 ORTHO05D005306 2.3e-55 219.9 130 76.2
arahy.Tifrunner.gnm1.ann1.QZ1T53 Arachis hypogaea HOM05D004712 ORTHO05D005306 2.3e-55 219.9 130 76.2
FAN20G0488 Fragaria x ananassa HOM05D004712 ORTHO05D005306 2.3e-55 219.9 130 76.9
vmacro17006 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 2.3e-55 219.9 140 70.0
Ca_13194_v3 Cicer arietinum L. HOM05D004712 ORTHO05D005306 3.1e-55 219.5 130 75.4
Hund03367 Selenicereus undatus HOM05D004712 ORTHO05D005306 3.1e-55 219.5 130 77.7
Glyma.17G231700 Glycine max HOM05D004712 ORTHO05D005306 4.0e-55 219.2 195 59.0
Sc09g0009600 Simmondsia chinensis HOM05D004712 ORTHO05D005306 4.0e-55 219.2 130 76.9
FAN27G0349 Fragaria x ananassa HOM05D004712 ORTHO05D005306 5.2e-55 218.8 130 76.2
TWI63G0904 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 6.8e-55 218.4 195 60.5
AT2G25910 Arabidopsis thaliana HOM05D004712 ORTHO05D005306 8.9e-55 218.0 131 76.3
FvH4_2g32310 Fragaria vesca HOM05D004712 ORTHO05D005306 8.9e-55 218.0 130 76.2
FAN24G2925 Fragaria x ananassa HOM05D004712 ORTHO05D005306 8.9e-55 218.0 130 76.2
Glyma.14G091700 Glycine max HOM05D004712 ORTHO05D005306 8.9e-55 218.0 195 59.5
Phvul.001G032800 Phaseolus vulgaris HOM05D004712 ORTHO05D005306 8.9e-55 218.0 130 76.9
RcHm_v2.0_Chr6g0310381 Rosa chinensis HOM05D004712 ORTHO05D005306 8.9e-55 218.0 130 76.9
Sp4g05810 Schrenkiella parvula HOM05D004712 ORTHO05D005306 1.5e-54 217.2 131 75.6
Medtr1g016970 Medicago truncatula HOM05D004712 ORTHO05D005306 2.6e-54 216.5 195 57.9
Sabra06G0182200 Salix brachista HOM05D004712 ORTHO05D005306 2.6e-54 216.5 196 59.7
Psat6g019200 Pisum sativum HOM05D004712 ORTHO05D005306 3.4e-54 216.1 130 73.8
TWI34G1658 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 3.4e-54 216.1 203 59.6
FAN15G0413 Fragaria x ananassa HOM05D004712 ORTHO05D005306 9.8e-54 214.5 130 75.4
GSVIVG01016906001 Vitis vinifera HOM05D004712 ORTHO05D005306 9.8e-54 214.5 129 74.4
Carub.0004s0573 Capsella rubella HOM05D004712 ORTHO05D005306 1.3e-53 214.2 131 74.8
SEGI_23712 Sequoiadendron giganteum HOM05D004712 ORTHO05D005306 1.3e-53 214.2 195 55.9
AL4G17960 Arabidopsis lyrata HOM05D004712 ORTHO05D005306 2.2e-53 213.4 132 75.8
QL05p017273 Quercus lobata HOM05D004712 ORTHO05D005306 3.7e-53 212.6 130 74.6
Sopen01g026340 Solanum pennellii HOM05D000014 ORTHO05D005306 3.7e-53 212.6 138 69.6
Rhsim08G0230100 Rhododendron simsii HOM05D004712 ORTHO05D005306 1.1e-52 211.1 130 74.6
EL10Ac2g03950 Beta vulgaris HOM05D004712 ORTHO05D005306 1.4e-52 210.7 130 73.1
QL05p017569 Quercus lobata HOM05D004712 ORTHO05D005306 1.4e-52 210.7 130 74.6
ATR0789G022 Amborella trichopoda HOM05D004712 ORTHO05D005306 1.9e-52 210.3 130 73.1
Thhalv10002033m.g Eutrema salsugineum HOM05D004712 ORTHO05D005306 1.9e-52 210.3 131 73.3
Peaxi162Scf00038g01243 Petunia axillaris HOM05D004712 ORTHO05D005306 1.9e-52 210.3 130 74.6
Rhsim12G0204300 Rhododendron simsii HOM05D004712 ORTHO05D005306 1.9e-52 210.3 129 72.9
BcaB06g29616 Brassica carinata HOM05D004712 ORTHO05D005306 4.1e-52 209.1 131 72.5
A04p20130 Brassica napus HOM05D004712 ORTHO05D005306 5.4e-52 208.8 131 72.5
C04p55830 Brassica napus HOM05D004712 ORTHO05D005306 5.4e-52 208.8 131 72.5
BraA04t17594Z Brassica rapa HOM05D004712 ORTHO05D005306 5.4e-52 208.8 131 72.5
AUR62040203 Chenopodium quinoa HOM05D004712 ORTHO05D005306 5.4e-52 208.8 130 73.8
PGSC0003DMG401002514 Solanum tuberosum HOM05D004712 ORTHO05D005306 5.4e-52 208.8 130 72.3
PGR031G0938 Punica granatum HOM05D004712 ORTHO05D005306 7.0e-52 208.4 131 72.5
Ah.10g034640 Amaranthus hybridus HOM05D004712 ORTHO05D005306 9.2e-52 208.0 130 70.8
AUR62009206 Chenopodium quinoa HOM05D004712 ORTHO05D005306 9.2e-52 208.0 130 73.1
CDE06G1081 Ceratophyllum demersum HOM05D004712 ORTHO05D005306 1.2e-51 207.6 130 71.5
Solyc03g121250.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 1.6e-51 207.2 130 71.5
Nitab4.5_0005661g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 3.5e-51 206.1 130 73.8
Nitab4.5_0010821g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 3.5e-51 206.1 130 73.8
BcaC02g08320 Brassica carinata HOM05D004712 ORTHO05D005306 4.6e-51 205.7 131 71.8
BolC4t27113H Brassica oleracea HOM05D004712 ORTHO05D005306 4.6e-51 205.7 131 71.8
Sopen03g040060 Solanum pennellii HOM05D004712 ORTHO05D005306 1.7e-50 203.8 133 70.7
SGA_v2.0_scaffold88G27214 Striga asiatica HOM05D004712 ORTHO05D005306 3.9e-50 202.6 117 76.9
Gohir.D03G057300 Gossypium hirsutum HOM05D004712 ORTHO05D005306 6.6e-50 201.8 130 66.9
Gorai.009G047400 Gossypium raimondii HOM05D004712 ORTHO05D005306 1.1e-49 201.1 115 80.0
Gohir.A02G116301 Gossypium hirsutum HOM05D004712 ORTHO05D005306 3.3e-49 199.5 130 66.9
AUR62031977 Chenopodium quinoa HOM05D004712 ORTHO05D005306 9.5e-49 198.0 130 64.6
AUR62040198 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.6e-48 197.2 132 70.5
HPP92_009150 Vanilla planifolia HOM05D004712 ORTHO05D005306 1.8e-47 193.7 131 65.6
Os01g0566900 Oryza sativa ssp. japonica HOM05D004712 ORTHO05D005306 1.5e-46 190.7 130 65.4
Zm00001eb159970 Zea mays HOM05D004712 ORTHO05D005306 1.5e-46 190.7 130 66.2
Zm00001eb356940 Zea mays HOM05D004712 ORTHO05D005306 2.6e-46 189.9 130 64.6
Lj5A50G64 Lonicera japonica HOM05D004712 ORTHO05D005306 1.1e-44 184.5 115 73.9
Mapoly0072s0029 Marchantia polymorpha HOM05D004712 ORTHO05D005306 1.0e-42 177.9 131 61.8
MBI04_g12189_MAGBIO Magnolia biondii HOM05D004712 ORTHO05D005306 2.5e-41 173.3 97 80.4
AagrBONN_evm.TU.Sc2ySwM_228.3302 Anthoceros agrestis HOM05D004712 ORTHO05D005306 4.7e-40 169.1 130 60.8
SMO174G0103 Selaginella moellendorffii HOM05D004712 ORTHO05D005306 4.0e-39 166.0 132 56.1
Pp3c15_8210 Physcomitrium patens HOM05D004712 ORTHO05D005306 6.0e-35 152.1 130 55.4
unitig_32.g10885 Utricularia gibba HOM05D004712 ORTHO05D005306 1.0e-34 151.4 119 60.5
unitig_748.g8268 Utricularia gibba HOM05D004712 ORTHO05D005306 1.8e-31 140.6 154 46.8
Cpa.g.sc131.9 Carica papaya HOM05D004712 ORTHO05D005306 7.8e-27 125.2 77 68.8
Solyc01g060200.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 1.7e-26 124.0 79 68.4
AUR62022272 Chenopodium quinoa HOM05D004712 ORTHO05D005306 4.3e-25 119.4 72 65.3
Glyma.04G087900 Glycine max HOM05D004712 ORTHO05D005306 7.3e-25 118.6 130 48.5
COL.COLO4_30565 Corchorus olitorius HOM05D004712 ORTHO05D005306 6.9e-23 112.1 71 66.2
CAN.G1143.35 Capsicum annuum HOM05D004712 ORTHO05D005306 7.6e-22 108.6 63 73.0
Pp3c9_13080 Physcomitrium patens HOM05D004712 ORTHO05D005306 2.4e-15 87.0 74 51.4
MSTRG.22613 Avicennia marina HOM05D004712 ORTHO05D005306 1.7e-13 80.9 56 69.6
Cpa.g.sc131.8 Carica papaya HOM05D004712 ORTHO05D005306 1.6e-11 74.3 60 61.7
Nn4g24691 Nelumbo nucifera HOM05D004712 ORTHO05D005306 5.1e-10 69.3 40 75.0
EL10Ac9g21163 Beta vulgaris HOM05D004712 ORTHO05D005306 7.4e-09 65.5 78 48.7
ATR0626G141 Amborella trichopoda HOM05D004712 ORTHO05D005306 6.2e-08 62.4 50 68.0


User provided reference genes

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