Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.7e-283 978.0 498 100.0
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 3.4e-254 881.3 499 91.6
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 1.1e-239 833.2 499 88.0
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 2.3e-226 788.9 496 82.3
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 6.8e-202 707.6 473 78.2
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 1.2e-201 706.8 480 75.8
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 1.2e-201 706.8 490 75.1
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 3.7e-200 701.8 445 79.3
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 4.1e-199 698.4 467 76.7
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 7.0e-199 697.6 493 75.5
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 1.6e-198 696.4 498 74.3
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 1.6e-198 696.4 464 76.7
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 4.5e-198 694.9 498 73.7
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 5.9e-198 694.5 499 73.1
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 1.0e-197 693.7 495 73.7
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 6.6e-197 691.0 487 74.9
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 1.1e-196 690.3 501 73.5
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 2.5e-196 689.1 499 72.7
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 3.3e-196 688.7 499 72.9
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 4.2e-196 688.3 450 77.6
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 7.2e-196 687.6 473 75.1
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 9.5e-196 687.2 498 72.5
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 9.5e-196 687.2 453 77.7
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 2.1e-195 686.0 501 73.7
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 6.1e-195 684.5 498 72.5
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 1.0e-194 683.7 496 73.6
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 1.4e-194 683.3 491 73.1
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 1.4e-194 683.3 504 69.4
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 3.0e-194 682.2 474 72.8
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 4.0e-194 681.8 498 71.5
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 4.0e-194 681.8 495 71.9
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 6.8e-194 681.0 497 72.4
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 8.9e-194 680.6 516 70.7
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 2.0e-193 679.5 497 73.4
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 3.4e-193 678.7 479 72.4
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 5.7e-193 677.9 501 70.7
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 5.7e-193 677.9 486 72.4
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 2.9e-192 675.6 493 71.0
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 3.7e-192 675.2 527 68.1
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 1.1e-191 673.7 479 73.5
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 1.4e-191 673.3 445 76.4
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 1.8e-191 672.9 499 70.5
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 2.4e-191 672.5 488 70.1
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 2.4e-191 672.5 455 75.6
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 5.4e-191 671.4 494 70.9
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 9.2e-191 670.6 432 77.3
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 1.2e-190 670.2 505 69.9
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 1.6e-190 669.8 488 71.3
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.7e-190 669.1 495 70.9
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 3.5e-190 668.7 449 73.9
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 3.5e-190 668.7 493 69.8
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 4.6e-190 668.3 498 70.1
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 4.6e-190 668.3 485 70.9
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 7.8e-190 667.5 495 70.5
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.7e-189 666.4 478 71.5
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 2.3e-189 666.0 455 73.6
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 2.9e-189 665.6 495 70.1
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 8.6e-189 664.1 498 69.9
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 1.1e-188 663.7 432 76.9
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 7.3e-188 661.0 510 69.2
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.2e-187 660.2 489 70.3
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 2.1e-187 659.4 432 78.0
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 3.6e-187 658.7 510 69.0
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 3.6e-187 658.7 495 68.7
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 4.7e-187 658.3 514 66.9
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 6.2e-187 657.9 490 71.0
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 1.0e-186 657.1 524 66.8
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 1.4e-186 656.8 476 70.8
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 1.4e-186 656.8 464 72.0
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 2.3e-186 656.0 501 69.1
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 4.0e-186 655.2 492 69.9
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 6.8e-186 654.4 476 70.4
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 8.9e-186 654.1 431 75.9
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.0e-185 652.9 499 69.7
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 2.6e-185 652.5 522 66.9
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 7.5e-185 651.0 505 68.3
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 9.8e-185 650.6 505 68.1
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 3.7e-184 648.7 505 68.1
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 3.7e-184 648.7 514 66.5
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 3.7e-184 648.7 525 67.0
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 6.4e-184 647.9 471 71.8
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 6.4e-184 647.9 471 71.8
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 8.3e-184 647.5 521 66.8
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 2.4e-183 646.0 504 68.1
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 2.4e-183 646.0 504 68.1
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 2.4e-183 646.0 510 67.1
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 5.4e-183 644.8 513 66.7
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 7.0e-183 644.4 510 66.7
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 2.0e-182 642.9 505 67.3
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 2.0e-182 642.9 497 68.6
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 2.7e-182 642.5 570 62.5
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 3.0e-181 639.0 489 69.1
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 8.6e-181 637.5 432 75.2
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 3.1e-178 629.0 463 70.4
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 5.2e-178 628.2 468 69.7
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 2.0e-177 626.3 471 69.9
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 2.0e-177 626.3 443 70.2
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 2.2e-176 622.9 442 70.1
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 4.1e-175 618.6 514 63.2
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 5.4e-175 618.2 444 70.7
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 7.8e-174 614.4 499 65.1
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 7.8e-174 614.4 432 72.5
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 7.3e-172 607.8 510 64.7
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 7.8e-166 587.8 447 68.9
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 1.9e-164 583.2 439 66.5
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 3.3e-164 582.4 452 64.6
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 2.0e-161 573.2 429 65.7
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 6.4e-160 568.2 437 63.4
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 6.2e-155 551.6 502 62.0
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 1.9e-151 540.0 444 60.4
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 3.6e-147 525.8 374 70.3
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 2.4e-146 523.1 507 60.7
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.2e-145 520.8 311 83.0
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 3.0e-141 506.1 434 60.1
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 6.7e-141 505.0 480 58.5
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 5.8e-137 491.9 441 61.7
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 2.1e-131 473.4 497 51.5
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 4.8e-131 472.2 418 61.5
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 4.1e-130 469.2 482 50.6
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 2.0e-116 423.7 446 56.1
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.5e-104 381.7 255 74.1
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 3.7e-83 313.2 400 47.5
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 1.9e-79 300.8 399 39.8
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.3e-75 288.1 245 59.6
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 1.0e-72 278.5 435 43.7
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 1.7e-72 277.7 262 60.3
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 1.2e-68 265.0 234 62.8
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.7e-67 261.2 174 75.3
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 6.4e-67 259.2 337 49.9
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.2e-65 255.0 460 34.6
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 2.9e-59 233.8 303 40.6
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 7.6e-52 209.1 157 68.8
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 3.2e-50 203.8 390 37.2
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 4.8e-38 163.3 170 54.7
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 8.1e-38 162.5 131 66.4
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.4e-34 149.8 96 75.0
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 9.6e-23 112.5 83 66.3
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 1.4e-21 108.6 57 89.5
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 2.4e-21 107.8 73 72.6
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 1.9e-18 98.2 134 47.0
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 3.2e-18 97.4 69 65.2
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 9.3e-18 95.9 86 59.3
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.6e-17 95.1 128 46.9
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 3.1e-13 80.9 64 60.9
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 1.5e-12 78.6 49 73.5
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 1.5e-12 78.6 49 73.5
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 5.9e-12 76.6 73 64.4


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