Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 3.1e-93 345.1 173 100.0
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 3.1e-53 212.2 113 94.7
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 5.0e-51 204.9 113 92.0
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 2.9e-43 179.1 113 80.5
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 5.7e-39 164.9 111 75.7
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 1.3e-38 163.7 116 73.3
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 1.7e-38 163.3 110 75.5
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 8.2e-38 161.0 115 72.2
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 8.2e-38 161.0 115 72.2
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 8.2e-38 161.0 111 72.1
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 1.1e-37 160.6 115 71.3
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.4e-37 160.2 110 73.6
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 1.4e-37 160.2 115 73.9
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 1.8e-37 159.8 115 74.8
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 2.4e-37 159.5 116 71.6
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 2.4e-37 159.5 111 73.9
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 2.4e-37 159.5 111 73.9
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 3.1e-37 159.1 116 70.7
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 3.1e-37 159.1 112 74.1
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 4.1e-37 158.7 109 74.3
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 6.9e-37 157.9 111 73.9
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 6.9e-37 157.9 110 72.7
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 9.1e-37 157.5 109 71.6
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 9.1e-37 157.5 111 73.0
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.2e-36 157.1 109 71.6
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 1.2e-36 157.1 114 71.9
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 1.5e-36 156.8 110 74.5
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.5e-36 156.8 118 69.5
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 1.5e-36 156.8 115 73.0
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 2.0e-36 156.4 108 73.1
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 2.0e-36 156.4 108 75.0
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 5.9e-36 154.8 106 75.5
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 5.9e-36 154.8 111 72.1
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 7.7e-36 154.5 105 68.6
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 7.7e-36 154.5 105 68.6
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 7.7e-36 154.5 111 71.2
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 7.7e-36 154.5 110 73.6
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 1.7e-35 153.3 106 73.6
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.7e-35 153.3 106 73.6
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.7e-35 153.3 106 73.6
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 1.7e-35 153.3 109 69.7
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 1.7e-35 153.3 111 70.3
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 2.2e-35 152.9 115 68.7
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 2.2e-35 152.9 117 70.9
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 2.2e-35 152.9 114 70.2
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 2.2e-35 152.9 106 73.6
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 3.8e-35 152.1 105 66.7
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 3.8e-35 152.1 105 66.7
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.8e-35 152.1 106 72.6
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 5.0e-35 151.8 111 73.0
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 6.5e-35 151.4 111 72.1
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 6.5e-35 151.4 114 68.4
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 8.5e-35 151.0 105 65.7
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 8.5e-35 151.0 116 68.1
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.1e-34 150.6 118 66.1
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.1e-34 150.6 115 67.0
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.1e-34 150.6 115 67.0
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 1.1e-34 150.6 104 66.3
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 1.4e-34 150.2 110 67.3
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 1.4e-34 150.2 103 73.8
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 1.9e-34 149.8 106 71.7
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 2.5e-34 149.4 110 68.2
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 3.2e-34 149.1 106 64.2
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 4.2e-34 148.7 113 68.1
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 5.5e-34 148.3 106 72.6
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 5.5e-34 148.3 111 67.6
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 5.5e-34 148.3 111 68.5
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 7.2e-34 147.9 116 66.4
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 7.2e-34 147.9 116 68.1
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 7.2e-34 147.9 109 66.1
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.2e-33 147.1 114 66.7
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 1.2e-33 147.1 117 67.5
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 4.7e-33 145.2 111 68.5
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 6.1e-33 144.8 114 64.0
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 1.0e-32 144.1 106 62.3
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 1.4e-32 143.7 105 63.8
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 1.4e-32 143.7 106 64.2
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 1.4e-32 143.7 114 64.0
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 1.4e-32 143.7 113 65.5
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 2.3e-32 142.9 102 68.6
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 2.3e-32 142.9 110 64.5
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 3.0e-32 142.5 111 66.7
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 3.9e-32 142.1 111 65.8
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 3.9e-32 142.1 105 68.6
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 5.1e-32 141.7 105 62.9
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 1.1e-31 140.6 110 66.4
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 1.5e-31 140.2 98 73.5
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 1.5e-31 140.2 104 68.3
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 4.4e-31 138.7 111 64.0
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 4.4e-31 138.7 104 65.4
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 4.8e-30 135.2 106 60.4
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 1.1e-29 134.0 186 48.4
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 1.4e-29 133.7 106 65.1
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 1.8e-29 133.3 112 62.5
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 2.0e-28 129.8 115 63.5
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 1.3e-27 127.1 106 55.7
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 8.8e-24 114.4 101 54.5
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 3.3e-23 112.5 89 59.6
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 7.5e-23 111.3 104 51.0
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 9.7e-23 110.9 76 72.4
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 7.0e-21 104.8 103 46.6
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 2.2e-19 99.8 63 77.8
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 1.9e-18 96.7 113 46.0
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 2.5e-18 96.3 82 64.6
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.5e-18 96.3 85 57.6
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 9.4e-18 94.4 66 69.7
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 7.5e-15 84.7 85 54.1
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 8.5e-11 71.2 55 65.5
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 1.9e-10 70.1 155 36.1
Psat7g095160 Pisum sativum HOM05D000780 ORTHO05D008187 9.4e-10 67.8 52 63.5
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 8.0e-09 64.7 50 64.0
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.3e-08 63.2 58 55.2
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 4.0e-08 62.4 102 34.3
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 6.3e-06 55.1 37 73.0


User provided reference genes

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