Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 1.9e-139 499.2 255 100.0
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 1.1e-112 410.2 251 82.1
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 3.7e-111 405.2 251 80.9
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 4.2e-99 365.2 251 71.7
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 6.7e-97 357.8 251 71.3
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.7e-95 353.2 250 70.0
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 4.1e-94 348.6 255 66.7
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 5.3e-94 348.2 255 70.6
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.7e-92 343.2 251 68.1
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 7.2e-91 337.8 251 64.9
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 7.2e-91 337.8 251 64.5
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 1.8e-89 333.2 251 66.5
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 8.8e-89 330.9 251 65.3
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 2.0e-88 329.7 251 65.3
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 2.6e-88 329.3 248 67.3
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 9.7e-88 327.4 251 65.3
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 9.7e-88 327.4 251 65.3
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 6.3e-87 324.7 268 59.3
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 1.4e-86 323.6 254 62.2
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.8e-86 323.2 251 63.3
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 3.1e-86 322.4 251 62.9
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 5.3e-86 321.6 254 59.8
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 5.3e-86 321.6 254 59.8
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 1.6e-85 320.1 224 69.6
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 2.0e-85 319.7 254 61.8
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 2.7e-85 319.3 251 63.7
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 4.5e-85 318.5 254 59.4
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 2.2e-84 316.2 256 61.7
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 2.9e-84 315.8 251 63.3
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 8.5e-84 314.3 247 65.6
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 8.5e-84 314.3 255 61.6
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.9e-83 313.2 259 62.5
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 1.9e-83 313.2 215 70.2
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 3.2e-83 312.4 247 61.5
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 4.2e-83 312.0 253 63.6
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 5.5e-83 311.6 248 64.5
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 9.4e-83 310.8 246 60.6
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 9.4e-83 310.8 259 61.4
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 3.6e-82 308.9 251 59.4
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 8.0e-82 307.8 248 62.1
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 1.4e-81 307.0 254 61.0
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 1.4e-81 307.0 247 60.7
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 2.3e-81 306.2 248 60.9
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 2.3e-81 306.2 255 61.6
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 5.7e-80 301.6 258 59.3
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 9.8e-80 300.8 251 61.4
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 1.3e-79 300.4 251 61.4
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 1.7e-79 300.1 247 59.1
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.7e-79 300.1 254 58.3
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 3.7e-79 298.9 243 60.5
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 6.3e-79 298.1 236 61.4
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 6.3e-79 298.1 254 57.1
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 8.3e-79 297.7 250 61.6
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 8.3e-79 297.7 255 60.8
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 1.1e-78 297.4 247 57.5
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 1.1e-78 297.4 247 57.5
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 2.4e-78 296.2 248 60.9
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 9.1e-78 294.3 247 57.1
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 9.1e-78 294.3 247 57.1
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 9.1e-78 294.3 205 71.2
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.2e-77 293.9 249 57.8
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 5.9e-77 291.6 252 58.3
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 1.3e-76 290.4 254 55.9
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 1.7e-76 290.0 249 59.8
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 5.0e-76 288.5 256 55.1
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 1.1e-75 287.3 255 57.6
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 3.3e-75 285.8 253 59.3
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 5.5e-75 285.0 256 57.4
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 7.2e-75 284.6 255 57.3
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 9.5e-75 284.3 212 64.6
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 1.2e-74 283.9 256 57.0
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.6e-74 283.5 321 47.7
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 6.1e-74 281.6 247 55.1
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 6.1e-74 281.6 247 55.1
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 6.1e-74 281.6 252 56.3
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.4e-73 280.4 255 56.5
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.4e-73 280.4 251 57.0
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.8e-73 280.0 251 56.2
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 5.2e-73 278.5 251 56.2
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 6.8e-73 278.1 252 55.6
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 3.4e-72 275.8 253 56.1
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 1.1e-70 270.8 251 55.4
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 2.4e-70 269.6 251 53.4
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 4.1e-70 268.9 247 53.8
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 5.9e-69 265.0 252 53.2
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 5.0e-68 261.9 206 64.1
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 2.1e-66 256.5 241 51.9
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 6.1e-66 255.0 224 58.9
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 6.1e-66 255.0 211 58.8
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 1.4e-65 253.8 299 49.2
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 5.2e-65 251.9 247 49.8
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 1.2e-64 250.8 239 52.7
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 7.0e-62 241.5 183 65.0
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 6.2e-58 228.4 204 54.4
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 2.1e-53 213.4 251 48.6
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 5.1e-52 208.8 238 47.1
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 2.5e-51 206.5 189 55.6
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 6.2e-50 201.8 178 57.9
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 8.9e-49 198.0 124 77.4
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 7.6e-48 194.9 125 72.0
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 2.2e-47 193.4 130 80.0
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 3.3e-43 179.5 249 38.2
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 5.2e-41 172.2 147 56.5
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 7.6e-40 168.3 278 35.6
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 1.3e-39 167.5 131 70.2
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 7.1e-38 161.8 249 36.1
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.2e-37 161.0 564 25.9
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.1e-37 160.2 166 52.4
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 3.1e-33 146.4 241 33.2
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 4.4e-32 142.5 234 37.2
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 2.1e-29 133.7 195 39.5
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 9.0e-25 118.2 133 46.6
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 7.6e-24 115.2 98 61.2
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 5.8e-16 89.0 57 86.0
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 6.5e-15 85.5 110 51.8
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.1e-14 84.7 123 34.1
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 4.2e-14 82.8 110 37.3
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 1.6e-13 80.9 219 27.9
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 6.7e-12 75.5 80 48.8
Nn2g11894 Nelumbo nucifera HOM05D001060 ORTHO05D008097 2.8e-10 70.1 120 41.7
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.8e-10 70.1 116 31.0
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 3.1e-09 66.6 130 39.2
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 5.5e-06 55.8 74 37.8


User provided reference genes

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