Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.7e-279 965.3 475 100.0
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 4.0e-228 794.7 468 83.3
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 9.0e-220 766.9 478 79.9
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 9.6e-206 720.3 475 74.5
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 1.5e-203 713.0 480 72.5
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 8.4e-202 707.2 481 74.2
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 3.2e-201 705.3 476 72.5
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 1.8e-199 699.5 476 71.2
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 3.9e-199 698.4 480 71.5
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 5.1e-199 698.0 477 73.6
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 5.7e-198 694.5 479 72.0
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 9.0e-196 687.2 470 71.9
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 2.0e-195 686.0 482 71.2
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 3.4e-195 685.3 478 70.7
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 5.9e-195 684.5 477 69.8
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 7.6e-195 684.1 479 70.8
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 5.0e-194 681.4 474 72.4
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 5.0e-194 681.4 472 70.8
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.4e-193 679.9 475 69.7
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 3.2e-193 678.7 477 70.4
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 3.2e-193 678.7 485 69.5
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 5.5e-193 677.9 477 71.1
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.6e-192 676.4 478 70.9
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 3.6e-192 675.2 477 70.4
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 1.3e-191 673.3 475 69.5
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 2.3e-191 672.5 478 69.5
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 9.7e-190 667.2 479 69.5
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 6.3e-189 664.5 472 69.1
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 1.4e-188 663.3 487 64.9
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 4.1e-188 661.8 475 68.8
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 6.9e-188 661.0 472 68.9
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.5e-187 659.8 479 69.7
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.7e-186 656.4 474 68.8
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 5.0e-186 654.8 476 69.1
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 1.4e-185 653.3 486 65.4
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.5e-185 652.5 488 65.4
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 3.2e-185 652.1 483 64.8
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.2e-184 650.2 475 67.6
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.6e-184 649.8 484 64.3
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 2.1e-184 649.4 474 66.9
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 4.6e-184 648.3 486 65.2
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 1.0e-183 647.1 487 63.9
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.0e-183 647.1 478 68.2
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 1.8e-183 646.4 486 64.2
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 1.8e-183 646.4 475 69.3
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 2.3e-183 646.0 483 66.0
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 3.0e-183 645.6 486 65.0
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 5.1e-183 644.8 479 66.2
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 6.7e-183 644.4 488 64.3
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 6.7e-183 644.4 486 64.8
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 8.8e-183 644.0 488 64.3
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 4.4e-182 641.7 476 67.0
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 4.4e-182 641.7 476 67.0
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 9.7e-182 640.6 476 66.2
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 2.8e-181 639.0 479 65.3
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 4.8e-181 638.3 477 66.7
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 8.2e-181 637.5 476 66.8
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 3.1e-180 635.6 472 66.3
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 6.9e-180 634.4 476 65.8
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.5e-179 633.3 475 64.8
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 2.6e-179 632.5 493 63.7
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 4.5e-179 631.7 476 65.1
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 7.7e-179 630.9 478 65.3
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 3.8e-178 628.6 483 64.2
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 3.8e-178 628.6 488 66.6
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 5.0e-178 628.2 476 66.2
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 8.5e-178 627.5 454 67.2
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.1e-177 627.1 472 66.1
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 1.9e-177 626.3 476 65.3
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 2.1e-176 622.9 478 64.9
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 4.7e-176 621.7 478 65.5
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 1.0e-175 620.5 485 64.7
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.4e-167 593.6 500 61.2
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.4e-167 593.6 477 62.9
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 1.7e-165 586.6 478 63.8
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 2.2e-165 586.3 429 65.3
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 2.7e-160 569.3 427 65.3
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 6.1e-160 568.2 478 60.7
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.1e-156 555.8 374 72.2
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 1.0e-154 550.8 492 58.5
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 2.2e-154 549.7 459 62.5
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 2.0e-150 536.6 423 61.2
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 2.9e-146 522.7 382 68.3
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 5.4e-140 501.9 385 61.6
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 1.9e-137 493.4 319 74.9
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 3.1e-135 486.1 338 70.1
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 2.9e-133 479.6 460 52.8
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 3.0e-130 469.5 316 69.9
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 4.1e-124 449.1 420 51.2
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 9.9e-118 427.9 484 45.9
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 2.4e-108 396.7 431 48.7
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 5.8e-102 375.6 255 71.8
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 6.4e-101 372.1 277 65.7
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 1.2e-99 367.9 385 47.5
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 3.5e-99 366.3 272 66.2
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 3.7e-96 356.3 437 43.7
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.1e-95 354.8 434 43.3
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 5.3e-95 352.4 359 52.6
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.2e-94 351.3 299 59.9
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 2.6e-94 350.1 277 62.8
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 5.6e-89 332.4 397 43.3
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 4.0e-87 326.2 239 66.1
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 9.0e-87 325.1 319 55.2
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 7.1e-84 315.5 446 40.8
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 3.4e-78 296.6 218 64.7
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.6e-75 287.7 251 61.8
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 3.1e-71 273.5 202 70.3
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 1.8e-66 257.7 236 57.6
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 3.1e-55 220.3 174 59.8
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 2.0e-54 217.6 189 60.8
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 1.0e-45 188.7 125 70.4
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 2.7e-43 180.6 118 72.0
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 9.1e-39 165.6 117 71.8
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 9.2e-31 139.0 110 66.4
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 6.1e-27 126.3 116 56.0
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 3.0e-26 124.0 100 61.0
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 1.5e-09 68.6 202 31.7
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 3.4e-09 67.4 202 31.7
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 7.5e-09 66.2 44 72.7
MD06G1157100 Malus domestica HOM05D006543 ORTHO05D008308 2.9e-08 64.3 78 52.6
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 6.4e-08 63.2 33 81.8
Actinidia26749 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.2e-06 58.9 45 62.2


User provided reference genes

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