Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 2.0e-146 522.3 248 100.0
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.7e-113 412.9 245 80.0
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 2.0e-106 389.4 246 73.6
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 2.1e-103 379.4 245 76.3
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 5.2e-102 374.8 245 73.5
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 1.5e-101 373.2 249 72.3
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 2.6e-101 372.5 245 73.1
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 5.7e-101 371.3 244 71.7
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 1.3e-100 370.2 249 71.5
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 2.2e-100 369.4 229 75.5
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 1.8e-99 366.3 241 71.0
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 1.6e-98 363.2 246 70.3
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 3.5e-98 362.1 242 71.1
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 1.0e-97 360.5 248 70.6
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 1.3e-97 360.1 233 71.7
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 2.9e-97 359.0 230 74.3
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 5.0e-97 358.2 246 70.3
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 1.9e-96 356.3 246 70.3
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 3.3e-96 355.5 248 69.4
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 5.5e-96 354.8 246 69.5
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 5.5e-96 354.8 235 71.1
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 9.5e-96 354.0 233 71.7
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 2.1e-95 352.8 247 69.6
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 4.7e-95 351.7 217 74.7
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 1.4e-94 350.1 234 71.4
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 1.4e-94 350.1 248 69.4
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 1.8e-94 349.7 246 67.9
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 2.3e-94 349.4 217 74.7
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 1.2e-93 347.1 228 71.9
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.2e-93 347.1 233 70.0
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 2.0e-93 346.3 235 68.9
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 2.6e-93 345.9 246 67.1
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 1.7e-92 343.2 247 68.0
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.2e-92 342.8 247 66.0
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 6.3e-92 341.3 216 73.1
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 3.1e-91 339.0 245 67.3
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 3.1e-91 339.0 214 72.9
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 5.4e-91 338.2 245 67.8
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.2e-90 337.0 222 72.1
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 1.6e-90 336.7 216 71.8
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 5.9e-90 334.7 245 66.5
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 1.3e-89 333.6 232 67.2
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 6.6e-89 331.3 248 63.3
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 8.6e-89 330.9 220 70.0
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 8.6e-89 330.9 217 70.0
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 1.1e-88 330.5 232 65.9
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 1.5e-88 330.1 219 71.7
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.9e-88 329.7 240 67.1
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 2.5e-88 329.3 216 70.4
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 7.3e-88 327.8 253 61.3
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 7.3e-88 327.8 253 61.3
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 9.5e-88 327.4 242 64.0
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 9.5e-88 327.4 218 70.2
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 1.6e-87 326.6 228 68.0
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 1.6e-87 326.6 245 64.9
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 3.6e-87 325.5 227 67.8
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 3.6e-87 325.5 216 71.8
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 8.0e-87 324.3 245 64.9
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 1.0e-86 323.9 223 69.5
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 1.4e-86 323.6 217 70.5
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.4e-86 323.6 205 73.2
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 1.8e-86 323.2 237 66.2
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 3.1e-86 322.4 220 70.0
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 3.1e-86 322.4 220 70.0
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 3.1e-86 322.4 220 70.0
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 3.1e-86 322.4 220 70.0
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 4.0e-86 322.0 212 69.3
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 5.2e-86 321.6 236 65.7
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 5.2e-86 321.6 244 65.2
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 8.9e-86 320.9 228 64.0
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 1.3e-84 317.0 223 66.4
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 2.2e-84 316.2 216 68.1
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 2.9e-84 315.8 230 65.7
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 1.4e-83 313.5 204 70.6
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 2.4e-83 312.8 245 64.1
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 2.4e-83 312.8 204 70.1
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 4.1e-83 312.0 218 67.0
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 7.0e-83 311.2 242 66.1
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 9.2e-83 310.8 226 64.2
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 6.0e-82 308.1 233 63.5
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 1.1e-80 303.9 218 67.0
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 9.5e-80 300.8 215 66.5
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 3.6e-79 298.9 212 66.0
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 4.7e-79 298.5 224 64.3
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 4.7e-79 298.5 245 58.8
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 5.4e-75 285.0 220 63.6
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 9.2e-75 284.3 200 68.0
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 1.1e-72 277.3 169 78.1
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 2.1e-71 273.1 171 78.4
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 6.2e-71 271.6 179 71.5
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 8.1e-71 271.2 179 72.1
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 2.2e-68 263.1 150 75.3
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 3.2e-67 259.2 180 64.4
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 5.4e-67 258.5 169 74.0
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 6.2e-63 245.0 158 70.9
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 1.9e-59 233.4 167 68.3
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 4.3e-56 222.2 171 64.9
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 7.3e-56 221.5 304 39.8
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 5.6e-48 195.3 242 43.0
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 4.5e-45 185.7 163 60.1
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 7.6e-45 184.9 225 45.3
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 1.4e-38 164.1 117 69.2
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 5.3e-38 162.2 118 61.9
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 7.6e-37 158.3 152 50.0
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 3.5e-34 149.4 107 60.7
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 1.6e-31 140.6 112 67.9
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 6.2e-31 138.7 189 40.7
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 9.4e-19 98.2 60 83.3
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 2.0e-16 90.5 60 76.7
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 3.7e-15 86.3 49 67.3
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 8.2e-15 85.1 131 37.4
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 1.8e-14 84.0 79 53.2
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 9.1e-14 81.6 47 70.2
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 1.5e-13 80.9 139 37.4
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 7.7e-13 78.6 96 46.9
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 4.7e-10 69.3 171 32.2
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 4.7e-10 69.3 180 29.4
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 3.3e-08 63.2 52 50.0
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 1.1e-06 58.2 126 32.5


User provided reference genes

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