Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G026500 Carya illinoinensis HOM05D003226 ORTHO05D020384 9.2e-102 373.6 198 100.0
TAR375G0513 Trochodendron aralioides HOM05D003226 ORTHO05D005723 1.3e-50 203.8 161 72.7
TAR381G0539 Trochodendron aralioides HOM05D003226 ORTHO05D005723 1.6e-50 203.4 161 72.0
Dinv33760 Davidia involucrata HOM05D003226 ORTHO05D005723 2.8e-50 202.6 161 71.4
Hma1.2p1_0409F.1_g146951 Hydrangea macrophylla HOM05D003226 ORTHO05D005723 4.8e-50 201.8 161 70.2
RcHm_v2.0_Chr6g0300801 Rosa chinensis HOM05D003226 ORTHO05D005723 3.1e-49 199.1 161 69.6
CiPaw.03G026700 Carya illinoinensis HOM05D003226 ORTHO05D005723 6.9e-49 198.0 369 41.2
Lj7C393G0 Lonicera japonica HOM05D003226 ORTHO05D005723 1.2e-48 197.2 161 68.9
CSS0044326 Camellia sinensis var. sinensis HOM05D003226 ORTHO05D005723 7.7e-48 194.5 161 68.9
Manes.02G046500 Manihot esculenta HOM05D003226 ORTHO05D005723 1.3e-47 193.7 161 68.3
Peaxi162Scf00011g02911 Petunia axillaris HOM05D003226 ORTHO05D005723 1.7e-47 193.4 161 67.1
FvH4_2g39941 Fragaria vesca HOM05D003226 ORTHO05D005723 5.0e-47 191.8 161 67.7
FAN15G3277 Fragaria x ananassa HOM05D003226 ORTHO05D005723 5.0e-47 191.8 161 67.7
Glyma.13G062800 Glycine max HOM05D003226 ORTHO05D005723 1.1e-46 190.7 161 68.9
Nitab4.5_0000274g0210 Nicotiana tabacum HOM05D003226 ORTHO05D005723 1.4e-46 190.3 195 58.5
TWI34G0415 Tripterygium wilfordii HOM05D003226 ORTHO05D005723 1.4e-46 190.3 161 65.2
Dinv09231 Davidia involucrata HOM05D003226 ORTHO05D020384 1.9e-46 189.9 160 66.2
Nitab4.5_0026203g0010 Nicotiana tabacum HOM05D003226 ORTHO05D005723 9.4e-46 187.6 161 65.2
VMungo0464G1600 Vigna mungo HOM05D003226 ORTHO05D005723 9.4e-46 187.6 161 67.1
FAN20G3149 Fragaria x ananassa HOM05D003226 ORTHO05D005723 1.6e-45 186.8 161 66.5
MBI18_g02834_MAGBIO Magnolia biondii HOM05D003226 ORTHO05D005723 4.6e-45 185.3 161 65.8
CsaV3_5G027630 Cucumis sativus L. HOM05D003226 ORTHO05D005723 7.9e-45 184.5 161 65.2
CAN.G206.153 Capsicum annuum HOM05D003226 ORTHO05D005723 1.8e-44 183.3 161 63.4
Potri.017G083200 Populus trichocarpa HOM05D003226 ORTHO05D005723 3.0e-44 182.6 147 70.7
SGA_v2.0_scaffold499G52482 Striga asiatica HOM05D003226 ORTHO05D005723 8.8e-44 181.0 161 64.0
MELO3C022910.2 Cucumis melo HOM05D003226 ORTHO05D005723 5.7e-43 178.3 161 64.6
TPR.G36529 Trifolium pratense HOM05D003226 ORTHO05D005723 1.3e-42 177.2 161 64.0
ECA246G4217 Erigeron canadensis HOM05D003226 ORTHO05D005723 4.8e-42 175.3 161 60.2
Migut.H00924 Erythranthe guttata HOM05D003226 ORTHO05D005723 6.3e-42 174.9 195 55.4
Sabra17G0073700 Salix brachista HOM05D003226 ORTHO05D005723 1.4e-41 173.7 143 69.2
Psat4g106040 Pisum sativum HOM05D003226 ORTHO05D005723 1.8e-41 173.3 161 64.6
Cc07_g03380 Coffea canephora HOM05D003226 ORTHO05D005723 4.1e-41 172.2 161 60.9
Lsat_1_v5_gn_3_101601 Lactuca sativa HOM05D003226 ORTHO05D005723 1.2e-40 170.6 161 59.0
AT5G48600 Arabidopsis thaliana HOM05D003226 ORTHO05D005723 4.5e-40 168.7 160 61.2
SHI25915 Sapria himalayana HOM05D003226 ORTHO05D005723 7.7e-40 167.9 161 61.5
Lalb_Chr21g0318701 Lupinus albus HOM05D003226 ORTHO05D005723 2.9e-39 166.0 161 60.2
Carub.0005s0749 Capsella rubella HOM05D003226 ORTHO05D005723 1.4e-38 163.7 160 60.6
HanXRQChr15g0473961 Helianthus annuus HOM05D003226 ORTHO05D005723 3.2e-38 162.5 161 57.1
PGR004G1048 Punica granatum HOM05D003226 ORTHO05D005723 3.2e-38 162.5 161 59.6
Aqoxy6G02361 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 4.2e-38 162.2 161 56.5
Rhsim10G0039000 Rhododendron simsii HOM05D003226 ORTHO05D005723 4.2e-38 162.2 160 61.2
Hund08915 Selenicereus undatus HOM05D003226 ORTHO05D005723 5.5e-38 161.8 148 62.2
Glyma.19G022800 Glycine max HOM05D003226 ORTHO05D005723 1.2e-37 160.6 145 65.5
Solyc02g087980.3 Solanum lycopersicum HOM05D003226 ORTHO05D005723 7.9e-37 157.9 161 57.8
RcHm_v2.0_Chr7g0223741 Rosa chinensis HOM05D003226 ORTHO05D005723 2.3e-36 156.4 161 55.9
PGSC0003DMG400001326 Solanum tuberosum HOM05D003226 ORTHO05D005723 2.3e-36 156.4 160 57.5
Ca_22432_v3 Cicer arietinum L. HOM05D003226 ORTHO05D005723 3.9e-36 155.6 161 60.2
COL.COLO4_33309 Corchorus olitorius HOM05D003226 ORTHO05D005723 3.9e-36 155.6 146 63.7
Sed0013037 Sechium edule HOM05D003226 ORTHO05D005723 1.1e-35 154.1 161 58.4
Thhalv10003529m.g Eutrema salsugineum HOM05D003226 ORTHO05D005723 2.0e-35 153.3 160 57.5
CANSAT64G2675 Cannabis sativa HOM05D003226 ORTHO05D005723 4.4e-35 152.1 161 57.8
FvH4_5g30910 Fragaria vesca HOM05D003226 ORTHO05D005723 7.4e-35 151.4 161 55.9
Nn4g25634 Nelumbo nucifera HOM05D003226 ORTHO05D005723 9.7e-35 151.0 126 69.0
Phvul.004G029000 Phaseolus vulgaris HOM05D003226 ORTHO05D005723 1.3e-34 150.6 148 62.2
Dinv15322 Davidia involucrata HOM05D003226 ORTHO05D020384 3.7e-34 149.1 126 66.7
GSVIVG01011408001 Vitis vinifera HOM05D003226 ORTHO05D005723 3.7e-34 149.1 161 57.8
Actinidia06098 Actinidia chinensis HOM05D003226 ORTHO05D005723 2.4e-33 146.4 113 74.3
Aqoxy5G00921 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 2.4e-33 146.4 160 54.4
CARHR037400 Cardamine hirsuta HOM05D003226 ORTHO05D005723 4.1e-33 145.6 146 58.9
Eucgr.I01943 Eucalyptus grandis HOM05D003226 ORTHO05D005723 5.3e-33 145.2 117 68.4
Prupe.3G267300 Prunus persica HOM05D003226 ORTHO05D005723 9.1e-33 144.4 169 55.6
Gohir.D09G014800 Gossypium hirsutum HOM05D003226 ORTHO05D005723 1.6e-32 143.7 112 71.4
Gorai.006G016800 Gossypium raimondii HOM05D003226 ORTHO05D005723 1.6e-32 143.7 112 71.4
Haze_14528 Corylus avellana HOM05D003226 ORTHO05D005723 3.5e-32 142.5 161 57.1
Gohir.A09G016100 Gossypium hirsutum HOM05D003226 ORTHO05D005723 3.5e-32 142.5 112 71.4
vmacro05694 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 3.5e-32 142.5 113 73.5
QL02p063973 Quercus lobata HOM05D003226 ORTHO05D005723 7.7e-32 141.4 161 57.1
Lj4g0003862 Lotus japonicus HOM05D003226 ORTHO05D005723 1.0e-31 141.0 147 59.2
Atru.chr8.162 Acer truncatum HOM05D003226 ORTHO05D005723 1.3e-31 140.6 161 56.5
THA.LOC104805468 Tarenaya hassleriana HOM05D003226 ORTHO05D005723 1.7e-31 140.2 147 57.1
Duzib187G0629 Durio zibethinus HOM05D003226 ORTHO05D005723 1.1e-30 137.5 111 68.5
Oeu062107.2 Olea europaea HOM05D003226 ORTHO05D005723 1.9e-30 136.7 146 58.2
ClCG11G000030 Citrullus lanatus HOM05D003226 ORTHO05D005723 2.5e-30 136.3 123 65.0
SGA_v2.0_scaffold1G00329 Striga asiatica HOM05D003226 ORTHO05D005723 4.2e-30 135.6 161 54.0
BcaC06g33656 Brassica carinata HOM05D003226 ORTHO05D005723 7.2e-30 134.8 147 56.5
C07p37860 Brassica napus HOM05D003226 ORTHO05D005723 7.2e-30 134.8 147 56.5
BolC7t44308H Brassica oleracea HOM05D003226 ORTHO05D005723 7.2e-30 134.8 147 56.5
DCAR_025375 Daucus carota HOM05D003226 ORTHO05D005723 9.4e-30 134.4 161 51.6
Cpa.g.sc140.54 Carica papaya HOM05D003226 ORTHO05D005723 1.6e-29 133.7 113 66.4
PSO017G5293 Papaver somniferum HOM05D003226 ORTHO05D005723 2.1e-29 133.3 115 64.3
PSO170G5698 Papaver somniferum HOM05D003226 ORTHO05D005723 2.7e-29 132.9 115 64.3
AUR62039793 Chenopodium quinoa HOM05D003226 ORTHO05D005723 3.6e-29 132.5 113 67.3
arahy.Tifrunner.gnm1.ann1.WKF5J8 Arachis hypogaea HOM05D003226 ORTHO05D005723 4.7e-29 132.1 160 53.8
Sopen02g032720 Solanum pennellii HOM05D003226 ORTHO05D005723 4.7e-29 132.1 116 64.7
HPP92_015724 Vanilla planifolia HOM05D003226 ORTHO05D005723 4.7e-29 132.1 167 50.3
Sp2g17560 Schrenkiella parvula HOM05D003226 ORTHO05D005723 6.1e-29 131.7 146 56.2
arahy.Tifrunner.gnm1.ann1.R713I2 Arachis hypogaea HOM05D003226 ORTHO05D005723 8.0e-29 131.3 160 53.1
Aqoxy293s003 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 1.8e-28 130.2 180 45.6
AL8G21600 Arabidopsis lyrata HOM05D003226 ORTHO05D005723 4.0e-28 129.0 160 51.2
A06p40240 Brassica napus HOM05D003226 ORTHO05D005723 6.7e-28 128.3 147 54.4
BraA06t26939Z Brassica rapa HOM05D003226 ORTHO05D005723 6.7e-28 128.3 147 54.4
AUR62029891 Chenopodium quinoa HOM05D003226 ORTHO05D005723 6.7e-28 128.3 113 64.6
Sc14g0005870 Simmondsia chinensis HOM05D003226 ORTHO05D005723 2.0e-27 126.7 147 55.1
Manes.18G107600 Manihot esculenta HOM05D003226 ORTHO05D020384 5.7e-27 125.2 161 50.9
vmacro02215 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 7.5e-27 124.8 161 51.6
Cfa007554 Carpinus fangiana HOM05D003226 ORTHO05D005723 2.2e-26 123.2 161 52.2
Medtr7g091420 Medicago truncatula HOM05D003226 ORTHO05D005723 3.7e-26 122.5 162 51.2
Ah.10g031620 Amaranthus hybridus HOM05D003226 ORTHO05D005723 6.3e-26 121.7 161 49.7
MD02G1198100 Malus domestica HOM05D003226 ORTHO05D005723 1.4e-25 120.6 102 66.7
EL10Ac2g02987 Beta vulgaris HOM05D003226 ORTHO05D005723 7.0e-25 118.2 113 61.9
Thecc.04G082300 Theobroma cacao HOM05D003226 ORTHO05D005723 7.0e-25 118.2 112 63.4
unitig_899.g15524 Utricularia gibba HOM05D003226 ORTHO05D005723 9.1e-25 117.9 126 56.3
Ciclev10010934m.g Citrus clementina HOM05D003226 ORTHO05D005723 1.3e-23 114.0 116 63.8
AUR62034416 Chenopodium quinoa HOM05D003226 ORTHO05D005723 1.7e-23 113.6 114 61.4
Rhsim07G0120700 Rhododendron simsii HOM05D003226 ORTHO05D005723 2.9e-23 112.8 125 56.8
SalBow1G4412 Salvia bowleyana HOM05D003226 ORTHO05D005723 6.5e-23 111.7 162 46.9
Aa31LG2G4270 Aethionema arabicum HOM05D003226 ORTHO05D005723 1.1e-22 110.9 147 49.7
Zm00001eb291710 Zea mays HOM05D003226 ORTHO05D005723 2.5e-22 109.8 111 55.0
Aqoxy5G00799 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 2.7e-21 106.3 116 53.4
Oeu035695.1 Olea europaea HOM05D003226 ORTHO05D005723 2.7e-21 106.3 111 55.9
Glyma.15G194701 Glycine max HOM05D003226 ORTHO05D020384 4.7e-21 105.5 86 72.1
Peaxi162Scf00129g00132 Petunia axillaris HOM05D003226 ORTHO05D005723 6.8e-20 101.7 161 43.5
Medtr8g072890 Medicago truncatula HOM05D003226 ORTHO05D005723 2.2e-18 96.7 73 72.6
PGSC0003DMG400013212 Solanum tuberosum HOM05D003226 ORTHO05D020384 6.3e-18 95.1 179 40.8
Sed0006229 Sechium edule HOM05D003226 ORTHO05D005723 4.5e-16 89.0 72 68.1
Mapoly0189s0011 Marchantia polymorpha HOM05D003226 ORTHO05D005723 2.2e-15 86.7 142 39.4
SEGI_24334 Sequoiadendron giganteum HOM05D003226 ORTHO05D005723 1.5e-14 84.0 103 49.5
Glyma.03G087801 Glycine max HOM05D003226 ORTHO05D020384 3.2e-14 82.8 60 73.3
ATR0605G313 Amborella trichopoda HOM05D003226 ORTHO05D005723 3.6e-13 79.3 62 69.4
MCO09G434 Micromonas commoda HOM05D003226 ORTHO05D005723 6.8e-12 75.1 135 37.0
RcHm_v2.0_Chr5g0008461 Rosa chinensis HOM05D003226 ORTHO05D035631 1.7e-10 70.5 44 77.3
RcHm_v2.0_Chr7g0226461 Rosa chinensis HOM05D003226 ORTHO05D005723 1.4e-09 67.4 336 27.4
Gohir.D06G146050 Gossypium hirsutum HOM05D001410 ORTHO05D011023 4.1e-09 65.9 68 50.0
RcHm_v2.0_Chr7g0223681 Rosa chinensis HOM05D003226 ORTHO05D011648 5.4e-09 65.5 134 35.1
AL43U10030 Arabidopsis lyrata HOM05D003226 ORTHO05D011023 4.5e-08 62.4 48 60.4
Gohir.D11G289266 Gossypium hirsutum HOM05D001348 ORTHO05D011023 4.5e-08 62.4 50 62.0
Gohir.D05G353500 Gossypium hirsutum HOM05D001410 ORTHO05D011023 2.3e-07 60.1 50 60.0
Gorai.009G386000 Gossypium raimondii HOM05D001410 ORTHO05D011023 2.3e-07 60.1 50 60.0
FAN13G2771 Fragaria x ananassa HOM05D003226 ORTHO05D005723 5.0e-07 58.9 51 62.7
Manes.11G018150 Manihot esculenta HOM05D003226 ORTHO05D011023 6.6e-07 58.5 62 51.6
FAN18G4273 Fragaria x ananassa HOM05D003226 ORTHO05D005723 8.6e-07 58.2 44 65.9
FvH4_6g23280 Fragaria vesca HOM05D003226 ORTHO05D011648 1.1e-06 57.8 44 65.9
Manes.07G039648 Manihot esculenta HOM05D003226 ORTHO05D011023 2.5e-06 56.6 37 73.0
CDE04G2390 Ceratophyllum demersum HOM05D003226 ORTHO05D005723 3.3e-06 56.2 33 78.8
Pp3c18_16050 Physcomitrium patens HOM05D003226 ORTHO05D005723 4.3e-06 55.8 126 35.7
PGR044G0718 Punica granatum HOM05D003226 ORTHO05D011023 7.3e-06 55.1 53 62.3


User provided reference genes

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