Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G146900 Carya illinoinensis HOM05D004877 ORTHO05D005942 1.9e-184 649.0 332 100.0
CiPaw.01G232800 Carya illinoinensis HOM05D004877 ORTHO05D005942 4.3e-160 568.2 332 86.7
QL05p020530 Quercus lobata HOM05D004877 ORTHO05D005942 2.7e-154 548.9 331 84.6
CANSAT01G3179 Cannabis sativa HOM05D004877 ORTHO05D005942 1.4e-142 510.0 332 79.2
Thecc.06G097500 Theobroma cacao HOM05D004877 ORTHO05D005942 3.4e-141 505.4 331 77.6
VMungo1080G0916 Vigna mungo HOM05D004877 ORTHO05D005942 1.9e-139 499.6 334 78.1
Prupe.3G061200 Prunus persica HOM05D004877 ORTHO05D005942 2.4e-139 499.2 332 76.5
arahy.Tifrunner.gnm1.ann1.64XDM2 Arachis hypogaea HOM05D004877 ORTHO05D005942 4.2e-139 498.4 334 77.8
Glyma.15G018900 Glycine max HOM05D004877 ORTHO05D005942 9.3e-139 497.3 334 77.5
Phvul.005G167000 Phaseolus vulgaris HOM05D004877 ORTHO05D005942 1.2e-138 496.9 334 78.7
arahy.Tifrunner.gnm1.ann1.4Y1F7A Arachis hypogaea HOM05D004877 ORTHO05D005942 1.6e-138 496.5 334 77.5
Lalb_Chr24g0396111 Lupinus albus HOM05D004877 ORTHO05D005942 2.7e-138 495.7 334 77.2
Glyma.13G355300 Glycine max HOM05D004877 ORTHO05D005942 4.6e-138 495.0 334 77.5
Duzib235G0210 Durio zibethinus HOM05D004877 ORTHO05D005942 7.8e-138 494.2 331 75.8
TWI18G0989 Tripterygium wilfordii HOM05D004877 ORTHO05D005942 7.8e-138 494.2 333 75.7
MD09G1205800 Malus domestica HOM05D004877 ORTHO05D005942 1.0e-137 493.8 332 76.8
Lj3g0003786 Lotus japonicus HOM05D004877 ORTHO05D005942 1.7e-137 493.0 334 76.9
Gohir.A02G118600 Gossypium hirsutum HOM05D004877 ORTHO05D005942 3.0e-137 492.3 332 75.6
Eucgr.J02948 Eucalyptus grandis HOM05D004877 ORTHO05D005942 8.7e-137 490.7 332 75.9
Lalb_Chr14g0373091 Lupinus albus HOM05D004877 ORTHO05D005942 1.5e-136 490.0 334 76.0
Gorai.003G063100 Gossypium raimondii HOM05D004877 ORTHO05D005942 5.6e-136 488.0 332 75.0
Atru.chr1.3498 Acer truncatum HOM05D004877 ORTHO05D005942 7.3e-136 487.6 334 74.6
Manes.04G132600 Manihot esculenta HOM05D004877 ORTHO05D005942 7.3e-136 487.6 334 75.1
Manes.11G035000 Manihot esculenta HOM05D004877 ORTHO05D005942 7.3e-136 487.6 334 75.7
Dinv37993 Davidia involucrata HOM05D004877 ORTHO05D005942 2.1e-135 486.1 337 75.7
Ca_01157_v3 Cicer arietinum L. HOM05D004877 ORTHO05D005942 2.8e-135 485.7 334 75.7
GSVIVG01017013001 Vitis vinifera HOM05D004877 ORTHO05D005942 4.0e-134 481.9 332 76.8
CSS0014120 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 5.3e-134 481.5 335 76.4
Gohir.D03G059200 Gossypium hirsutum HOM05D004877 ORTHO05D005942 9.0e-134 480.7 333 74.2
Ciclev10026016m.g Citrus clementina HOM05D004877 ORTHO05D005942 1.5e-133 479.9 340 75.0
Psat5g297080 Pisum sativum HOM05D004877 ORTHO05D005942 1.5e-133 479.9 334 74.6
MD17G1186700 Malus domestica HOM05D004877 ORTHO05D005942 3.4e-133 478.8 332 73.8
Duzib192G0168 Durio zibethinus HOM05D004877 ORTHO05D005942 4.5e-133 478.4 331 74.0
TPR.G37257 Trifolium pratense HOM05D004877 ORTHO05D005942 4.5e-133 478.4 335 74.3
FAN05G1125 Fragaria x ananassa HOM05D004877 ORTHO05D005942 7.6e-133 477.6 334 74.3
FAN02G1875 Fragaria x ananassa HOM05D004877 ORTHO05D005942 9.9e-133 477.2 334 74.3
Medtr2g101270 Medicago truncatula HOM05D004877 ORTHO05D005942 9.9e-133 477.2 333 74.2
Ah.01g005680 Amaranthus hybridus HOM05D004877 ORTHO05D005942 4.2e-131 471.9 332 73.2
FAN14G1716 Fragaria x ananassa HOM05D004877 ORTHO05D005942 5.4e-131 471.5 334 73.7
PGR102G2474 Punica granatum HOM05D004877 ORTHO05D005942 7.1e-131 471.1 337 73.3
FAN09G1375 Fragaria x ananassa HOM05D004877 ORTHO05D005942 1.2e-130 470.3 334 73.7
FvH4_6g32170 Fragaria vesca HOM05D004877 ORTHO05D005942 2.7e-130 469.2 334 73.4
RcHm_v2.0_Chr2g0140061 Rosa chinensis HOM05D004877 ORTHO05D005942 3.5e-130 468.8 334 73.7
AUR62022182 Chenopodium quinoa HOM05D004877 ORTHO05D005942 6.0e-130 468.0 332 72.0
COL.COLO4_30486 Corchorus olitorius HOM05D004877 ORTHO05D005942 7.9e-130 467.6 332 74.4
AUR62031885 Chenopodium quinoa HOM05D004877 ORTHO05D005942 1.0e-129 467.2 332 72.3
Sp3g14680 Schrenkiella parvula HOM05D004877 ORTHO05D005942 3.9e-129 465.3 335 71.0
Gohir.D03G059150 Gossypium hirsutum HOM05D004877 ORTHO05D005942 6.7e-129 464.5 320 74.7
Dinv30451 Davidia involucrata HOM05D004877 ORTHO05D005942 5.6e-128 461.5 339 73.2
Sc10g0007170 Simmondsia chinensis HOM05D004877 ORTHO05D005942 1.3e-127 460.3 335 71.6
Actinidia32706 Actinidia chinensis HOM05D004877 ORTHO05D005942 1.1e-126 457.2 339 73.5
ClCG09G000060 Citrullus lanatus HOM05D004877 ORTHO05D005942 1.1e-126 457.2 335 70.7
Thhalv10021095m.g Eutrema salsugineum HOM05D004877 ORTHO05D005942 1.4e-126 456.8 337 69.7
Hund06654 Selenicereus undatus HOM05D004877 ORTHO05D005942 2.4e-126 456.1 332 71.7
EL10Ac9g22101 Beta vulgaris HOM05D004877 ORTHO05D005942 6.9e-126 454.5 382 64.9
Sc10g0007240 Simmondsia chinensis HOM05D004877 ORTHO05D005942 1.2e-125 453.8 335 70.4
Sed0013882 Sechium edule HOM05D004877 ORTHO05D005942 1.5e-125 453.4 332 71.4
CsaV3_7G035410 Cucumis sativus L. HOM05D004877 ORTHO05D005942 2.0e-125 453.0 335 70.4
Potri.001G188300 Populus trichocarpa HOM05D004877 ORTHO05D005942 2.6e-125 452.6 324 71.9
SalBow1G2757 Salvia bowleyana HOM05D004877 ORTHO05D005942 2.6e-125 452.6 340 69.7
SalBow2G1418 Salvia bowleyana HOM05D004877 ORTHO05D005942 2.6e-125 452.6 340 69.7
TAR636G0039 Trochodendron aralioides HOM05D004877 ORTHO05D005942 5.8e-125 451.4 332 69.0
THA.LOC104817965 Tarenaya hassleriana HOM05D004877 ORTHO05D005942 1.3e-124 450.3 335 69.0
Cc04_g02700 Coffea canephora HOM05D004877 ORTHO05D005942 2.2e-124 449.5 340 70.6
AT3G16310 Arabidopsis thaliana HOM05D004877 ORTHO05D005942 2.9e-124 449.1 335 69.6
MELO3C024450.2 Cucumis melo HOM05D004877 ORTHO05D005942 3.8e-124 448.7 335 69.6
Gorai.011G072600 Gossypium raimondii HOM05D004877 ORTHO05D005942 3.8e-124 448.7 330 68.2
Lj9A511G47 Lonicera japonica HOM05D004877 ORTHO05D005942 1.1e-123 447.2 343 71.7
AL3G29060 Arabidopsis lyrata HOM05D004877 ORTHO05D005942 1.6e-122 443.4 335 68.7
Carub.0003s1606 Capsella rubella HOM05D004877 ORTHO05D005942 4.6e-122 441.8 336 68.5
Hund00671 Selenicereus undatus HOM05D004877 ORTHO05D005942 1.0e-121 440.7 334 69.5
Gohir.A10G066900 Gossypium hirsutum HOM05D004877 ORTHO05D005942 6.7e-121 438.0 330 67.3
Sabra01G0152700 Salix brachista HOM05D004877 ORTHO05D005942 6.7e-121 438.0 334 68.0
CARHR091520 Cardamine hirsuta HOM05D004877 ORTHO05D005942 1.1e-120 437.2 325 70.2
BcaC05g28894 Brassica carinata HOM05D004877 ORTHO05D005942 2.5e-120 436.0 335 68.1
Nitab4.5_0003167g0040 Nicotiana tabacum HOM05D004877 ORTHO05D005942 2.5e-120 436.0 339 68.1
TAR624G0319 Trochodendron aralioides HOM05D004877 ORTHO05D005942 7.4e-120 434.5 332 69.0
PGSC0003DMG400002534 Solanum tuberosum HOM05D004877 ORTHO05D005942 9.6e-120 434.1 339 66.7
Nitab4.5_0001755g0090 Nicotiana tabacum HOM05D004877 ORTHO05D005942 1.6e-119 433.3 339 67.6
CAN.G438.5 Capsicum annuum HOM05D004877 ORTHO05D005942 3.7e-119 432.2 340 67.1
Sopen03g039700 Solanum pennellii HOM05D004877 ORTHO05D005942 3.7e-119 432.2 339 66.7
Peaxi162Scf00038g00844 Petunia axillaris HOM05D004877 ORTHO05D005942 4.8e-119 431.8 342 67.0
BraA05t22146Z Brassica rapa HOM05D004877 ORTHO05D005942 6.2e-119 431.4 332 67.5
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 1.1e-118 430.6 339 66.7
Nn8g39120 Nelumbo nucifera HOM05D004877 ORTHO05D005942 6.9e-118 427.9 354 63.3
C05p50190 Brassica napus HOM05D004877 ORTHO05D005942 9.0e-118 427.6 329 67.8
BolC5t33769H Brassica oleracea HOM05D004877 ORTHO05D005942 9.0e-118 427.6 329 67.8
arahy.Tifrunner.gnm1.ann1.NE95XN Arachis hypogaea HOM05D004877 ORTHO05D005942 1.2e-117 427.2 354 66.4
arahy.Tifrunner.gnm1.ann1.WG6QSW Arachis hypogaea HOM05D004877 ORTHO05D005942 1.2e-117 427.2 354 66.4
MBI01_g42890_MAGBIO Magnolia biondii HOM05D004877 ORTHO05D005942 2.6e-117 426.0 338 67.2
Aa31LG8G3450 Aethionema arabicum HOM05D004877 ORTHO05D005942 7.6e-117 424.5 332 64.8
BcaB06g25724 Brassica carinata HOM05D004877 ORTHO05D005942 3.8e-116 422.2 340 66.8
CSS0036359 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 3.8e-116 422.2 343 69.1
Gohir.D10G068000 Gossypium hirsutum HOM05D004877 ORTHO05D005942 3.8e-116 422.2 330 65.8
Aqoxy7G01469 Aquilegia oxysepala HOM05D004877 ORTHO05D005942 2.5e-115 419.5 334 65.6
Rhsim08G0226300 Rhododendron simsii HOM05D004877 ORTHO05D005942 7.1e-115 417.9 348 67.8
Oeu001891.1 Olea europaea HOM05D004877 ORTHO05D005942 5.1e-113 411.8 335 65.1
DCAR_016196 Daucus carota HOM05D004877 ORTHO05D005942 2.5e-112 409.5 341 65.1
SGA_v2.0_scaffold69G23330 Striga asiatica HOM05D004877 ORTHO05D005942 2.5e-112 409.5 338 64.5
MSTRG.22647 Avicennia marina HOM05D004877 ORTHO05D005942 4.3e-112 408.7 340 64.4
MSTRG.11036 Avicennia marina HOM05D004877 ORTHO05D005942 1.0e-108 397.5 340 64.1
Sed0014944 Sechium edule HOM05D004877 ORTHO05D005942 5.5e-107 391.7 334 63.5
Lj9A524G48 Lonicera japonica HOM05D004877 ORTHO05D005942 3.6e-106 389.0 358 64.2
Cpa.g.c40702 Carica papaya HOM05D004877 ORTHO05D005942 2.3e-105 386.3 262 76.7
Lsat_1_v5_gn_4_99980 Lactuca sativa HOM05D004877 ORTHO05D005942 3.3e-104 382.5 360 60.6
CDE05G3078 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 9.1e-102 374.4 335 60.3
Haze_15830 Corylus avellana HOM05D002410 ORTHO05D002805 1.7e-100 370.2 323 65.3
PSO173G0077 Papaver somniferum HOM05D004877 ORTHO05D005942 1.9e-99 366.7 353 58.9
PSO832G2273 Papaver somniferum HOM05D004877 ORTHO05D005942 4.2e-99 365.5 353 58.4
HanXRQChr09g0275881 Helianthus annuus HOM05D004877 ORTHO05D005942 9.7e-96 354.4 356 56.5
vmacro18867 Vaccinium macrocarpon HOM05D004877 ORTHO05D005942 1.3e-95 354.0 285 68.1
CDE05G1429 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 6.3e-95 351.7 334 58.1
ATR0705G205 Amborella trichopoda HOM05D004877 ORTHO05D005942 8.2e-95 351.3 342 55.8
unitig_37.g12259 Utricularia gibba HOM05D004877 ORTHO05D005942 1.2e-93 347.4 327 58.4
unitig_46.g18560 Utricularia gibba HOM05D004877 ORTHO05D005942 1.5e-93 347.1 341 57.8
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 3.1e-86 322.8 320 57.2
TAR624G1397 Trochodendron aralioides HOM05D004877 ORTHO05D005942 6.5e-84 315.1 228 70.6
Haze_15829 Corylus avellana HOM05D004877 ORTHO05D005942 1.6e-74 283.9 256 63.3
Actinidia39142 Actinidia chinensis HOM05D004877 ORTHO05D005942 1.0e-73 281.2 246 63.8
Peaxi162Scf00894g00009 Petunia axillaris HOM05D004877 ORTHO05D005942 1.4e-70 270.8 210 67.1
HanXRQChr16g0501211 Helianthus annuus HOM05D004877 ORTHO05D005942 4.2e-67 259.2 355 45.1
arahy.Tifrunner.gnm1.ann1.XV48AZ Arachis hypogaea HOM05D004877 ORTHO05D005942 1.1e-62 244.6 189 68.3
Peaxi162Scf11517g00001 Petunia axillaris HOM05D004877 ORTHO05D005942 1.8e-62 243.8 188 67.6
Migut.I00909 Erythranthe guttata HOM05D004877 ORTHO05D005942 2.7e-61 240.0 268 54.9
SEGI_39894 Sequoiadendron giganteum HOM05D004877 ORTHO05D005942 8.6e-60 235.0 380 41.3
Pp3c6_16260 Physcomitrium patens HOM05D004877 ORTHO05D005942 2.2e-55 220.3 352 42.0
Pp3c5_15240 Physcomitrium patens HOM05D004877 ORTHO05D005942 4.9e-55 219.2 357 42.0
Mapoly0014s0033 Marchantia polymorpha HOM05D004877 ORTHO05D005942 2.0e-53 213.8 350 43.7
Os01g0200500 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 4.4e-48 196.1 215 51.6
HPP92_002859 Vanilla planifolia HOM05D004877 ORTHO05D005942 1.7e-47 194.1 227 51.1
Zm00001eb337990 Zea mays HOM05D004877 ORTHO05D005942 6.0e-45 185.7 344 39.0
SMO144G0168 Selaginella moellendorffii HOM05D004877 ORTHO05D005942 3.6e-42 176.4 175 50.9
Zm00001eb293750 Zea mays HOM05D004877 ORTHO05D005942 7.1e-38 162.2 344 38.1
AagrBONN_evm.TU.Sc2ySwM_117.2493 Anthoceros agrestis HOM05D004877 ORTHO05D005942 1.2e-32 144.8 334 35.0
Os05g0520100 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 2.0e-32 144.1 350 33.4
Nn2g11613 Nelumbo nucifera HOM05D004877 ORTHO05D005942 7.8e-29 132.1 116 62.1
Zm00001eb353450 Zea mays HOM05D004877 ORTHO05D005942 2.4e-25 120.6 355 31.8
CBR_g44943 Chara braunii HOM05D004877 ORTHO05D005942 2.0e-24 117.5 147 46.3
SEGI_33810 Sequoiadendron giganteum HOM05D004877 ORTHO05D000002 7.6e-24 115.5 125 48.8
PSO675G8939 Papaver somniferum HOM05D004877 ORTHO05D005942 1.3e-23 114.8 137 49.6
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 1.2e-21 108.2 81 63.0
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 4.6e-21 106.3 81 61.7
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 1.0e-20 105.1 85 62.4
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 1.0e-20 105.1 112 50.0
Nn5g29960 Nelumbo nucifera HOM05D004877 ORTHO05D005942 2.5e-19 100.5 102 54.9
MD07G1258000 Malus domestica HOM05D004877 ORTHO05D005942 3.8e-15 86.7 55 74.5
Cre12.g553050 Chlamydomonas reinhardtii HOM05D004877 ORTHO05D005942 8.4e-15 85.5 74 51.4
MD16G1217600 Malus domestica HOM05D004877 ORTHO05D005942 2.4e-14 84.0 74 55.4
TAR629G0138 Trochodendron aralioides HOM05D004753 ORTHO05D005920 2.3e-12 77.4 81 53.1
Cpa.g.c43067 Carica papaya HOM05D004877 ORTHO05D005942 3.9e-12 76.6 41 87.8
TAR624G1091 Trochodendron aralioides HOM05D004877 ORTHO05D005942 2.5e-11 73.9 61 62.3
PRCOL_00002288 Prasinoderma coloniale HOM05D004877 ORTHO05D005942 5.6e-11 72.8 333 25.5
Pp3c1_40780 Physcomitrium patens HOM05D004877 ORTHO05D005942 9.9e-08 62.0 160 31.9
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 1.7e-07 61.2 53 50.9
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 2.5e-06 57.4 43 62.8


User provided reference genes

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