Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026479 Carpinus fangiana HOM05D003132 ORTHO05D003736 0.0e+00 1372.8 729 100.0
Mapoly0003s0258 Marchantia polymorpha HOM05D003132 ORTHO05D003736 2.1e-42 178.3 282 35.1
Pp3c23_18370 Physcomitrium patens HOM05D003132 ORTHO05D003736 2.3e-41 174.9 283 33.9
HanXRQChr14g0440811 Helianthus annuus HOM05D003132 ORTHO05D003736 2.6e-40 171.4 286 32.2
SMO356G0397 Selaginella moellendorffii HOM05D003132 ORTHO05D003736 3.3e-40 171.0 280 34.6
Nitab4.5_0002247g0160 Nicotiana tabacum HOM05D003132 ORTHO05D003736 2.8e-39 167.9 285 34.4
Potri.005G171500 Populus trichocarpa HOM05D003132 ORTHO05D003736 3.7e-39 167.5 285 34.0
Lsat_1_v5_gn_2_115101 Lactuca sativa HOM05D003132 ORTHO05D003736 4.8e-39 167.2 286 32.2
PGSC0003DMG400027521 Solanum tuberosum HOM05D003132 ORTHO05D003736 6.3e-39 166.8 280 35.0
Nitab4.5_0004014g0020 Nicotiana tabacum HOM05D003132 ORTHO05D003736 8.2e-39 166.4 280 34.6
Peaxi162Scf00647g00129 Petunia axillaris HOM05D003132 ORTHO05D003736 8.2e-39 166.4 280 33.9
Solyc01g096990.4 Solanum lycopersicum HOM05D003132 ORTHO05D003736 1.8e-38 165.2 281 34.9
AL3G33220 Arabidopsis lyrata HOM05D003132 ORTHO05D003736 2.4e-38 164.9 290 33.4
AT3G19770 Arabidopsis thaliana HOM05D003132 ORTHO05D003736 2.4e-38 164.9 290 33.1
BcaB06g26045 Brassica carinata HOM05D003132 ORTHO05D003736 2.4e-38 164.9 284 34.5
A05p29830 Brassica napus HOM05D003132 ORTHO05D003736 2.4e-38 164.9 284 34.5
DCAR_020428 Daucus carota HOM05D003132 ORTHO05D003736 2.4e-38 164.9 335 31.0
BcaC05g28420 Brassica carinata HOM05D003132 ORTHO05D003736 3.1e-38 164.5 284 34.2
BolC5t33226H Brassica oleracea HOM05D003132 ORTHO05D003736 3.1e-38 164.5 284 34.2
CAN.G134.60 Capsicum annuum HOM05D003132 ORTHO05D003736 3.1e-38 164.5 280 34.6
Ciclev10001011m.g Citrus clementina HOM05D003132 ORTHO05D003736 3.1e-38 164.5 341 30.8
TWI56G0630 Tripterygium wilfordii HOM05D003132 ORTHO05D003736 3.1e-38 164.5 284 33.5
C05p45020 Brassica napus HOM05D003132 ORTHO05D003736 4.1e-38 164.1 284 34.2
BraA05t21832Z Brassica rapa HOM05D003132 ORTHO05D003736 4.1e-38 164.1 284 34.5
PSO170G1030 Papaver somniferum HOM05D003132 ORTHO05D003736 5.3e-38 163.7 302 31.1
THA.LOC104806806 Tarenaya hassleriana HOM05D003132 ORTHO05D003736 5.3e-38 163.7 337 31.5
Cfa015956 Carpinus fangiana HOM05D003132 ORTHO05D003736 7.0e-38 163.3 314 31.8
TPR.G32950 Trifolium pratense HOM05D003132 ORTHO05D003736 7.0e-38 163.3 285 34.4
TAR628G0266 Trochodendron aralioides HOM05D003132 ORTHO05D003736 7.0e-38 163.3 288 32.6
ECA238G0880 Erigeron canadensis HOM05D003132 ORTHO05D003736 9.1e-38 162.9 285 32.3
PSO017G5000 Papaver somniferum HOM05D003132 ORTHO05D003736 9.1e-38 162.9 288 31.2
Psat5g133920 Pisum sativum HOM05D003132 ORTHO05D003736 9.1e-38 162.9 285 34.4
CARHR095280 Cardamine hirsuta HOM05D003132 ORTHO05D003736 1.2e-37 162.5 322 32.0
Lalb_Chr11g0065661 Lupinus albus HOM05D003132 ORTHO05D003736 1.6e-37 162.2 285 33.3
Eucgr.F03739 Eucalyptus grandis HOM05D003132 ORTHO05D003736 2.0e-37 161.8 343 29.7
GSVIVG01008947001 Vitis vinifera HOM05D003132 ORTHO05D003736 2.0e-37 161.8 282 33.0
A10p27920 Brassica napus HOM05D003132 ORTHO05D003736 2.6e-37 161.4 279 33.7
BraA10t44841Z Brassica rapa HOM05D003132 ORTHO05D003736 2.6e-37 161.4 279 33.7
CBR_g241 Chara braunii HOM05D003132 ORTHO05D003736 2.6e-37 161.4 453 29.1
Migut.C01198 Erythranthe guttata HOM05D003132 ORTHO05D003736 2.6e-37 161.4 315 31.1
Carub.0003s1964 Capsella rubella HOM05D003132 ORTHO05D003736 3.5e-37 161.0 318 32.1
Thhalv10012815m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 3.5e-37 161.0 279 34.1
Lj1g0008302 Lotus japonicus HOM05D003132 ORTHO05D003736 3.5e-37 161.0 283 33.2
Medtr3g073360 Medicago truncatula HOM05D003132 ORTHO05D003736 3.5e-37 161.0 285 34.0
Thhalv10020497m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 4.5e-37 160.6 285 33.0
arahy.Tifrunner.gnm1.ann1.KS02B5 Arachis hypogaea HOM05D003132 ORTHO05D003736 5.9e-37 160.2 285 33.0
arahy.Tifrunner.gnm1.ann1.M9VU1N Arachis hypogaea HOM05D003132 ORTHO05D003736 5.9e-37 160.2 285 33.0
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 7.7e-37 159.8 346 30.3
Nn5g27185 Nelumbo nucifera HOM05D003132 ORTHO05D003736 7.7e-37 159.8 308 32.5
TAR624G0618 Trochodendron aralioides HOM05D003132 ORTHO05D003736 7.7e-37 159.8 287 31.4
ATR0171G023 Amborella trichopoda HOM05D003132 ORTHO05D003736 1.0e-36 159.5 282 32.6
SalBow7G2329 Salvia bowleyana HOM05D003132 ORTHO05D003736 1.0e-36 159.5 302 31.5
Sp6g33990 Schrenkiella parvula HOM05D003132 ORTHO05D003736 1.0e-36 159.5 279 33.7
Aqoxy5G02472 Aquilegia oxysepala HOM05D003132 ORTHO05D003736 1.3e-36 159.1 325 31.7
Sc01g0001580 Simmondsia chinensis HOM05D003132 ORTHO05D003736 1.3e-36 159.1 282 31.6
Atru.chr13.1311 Acer truncatum HOM05D003132 ORTHO05D003736 1.7e-36 158.7 290 31.7
Ca_25763_v3 Cicer arietinum L. HOM05D003132 ORTHO05D003736 1.7e-36 158.7 285 33.0
SGA_v2.0_scaffold28G12034 Striga asiatica HOM05D003132 ORTHO05D003736 2.9e-36 157.9 331 30.2
BcaB08g37215 Brassica carinata HOM05D003132 ORTHO05D003736 3.8e-36 157.5 279 33.0
C09p68030 Brassica napus HOM05D003132 ORTHO05D003736 3.8e-36 157.5 279 32.6
FAN08G0026 Fragaria x ananassa HOM05D003132 ORTHO05D003736 3.8e-36 157.5 279 33.0
SalBow7G4391 Salvia bowleyana HOM05D003132 ORTHO05D003736 3.8e-36 157.5 302 31.1
FvH4_5g38820 Fragaria vesca HOM05D003132 ORTHO05D003736 5.0e-36 157.1 284 32.4
Gorai.010G046700 Gossypium raimondii HOM05D003132 ORTHO05D003736 5.0e-36 157.1 277 33.6
CDE06G0428 Ceratophyllum demersum HOM05D003132 ORTHO05D003736 6.5e-36 156.8 287 30.7
Eucgr.F04096 Eucalyptus grandis HOM05D003132 ORTHO05D003736 6.5e-36 156.8 334 29.9
FAN04G1930 Fragaria x ananassa HOM05D003132 ORTHO05D003736 6.5e-36 156.8 279 32.6
FAN13G2880 Fragaria x ananassa HOM05D003132 ORTHO05D003736 6.5e-36 156.8 279 33.0
FAN18G1429 Fragaria x ananassa HOM05D003132 ORTHO05D003736 6.5e-36 156.8 279 33.0
Lj7C306G6 Lonicera japonica HOM05D000316 ORTHO05D000374 6.5e-36 156.8 301 31.9
Phvul.009G026000 Phaseolus vulgaris HOM05D003132 ORTHO05D003736 6.5e-36 156.8 277 32.9
RcHm_v2.0_Chr7g0240821 Rosa chinensis HOM05D003132 ORTHO05D003736 6.5e-36 156.8 278 32.4
AagrBONN_evm.TU.Sc2ySwM_368.655 Anthoceros agrestis HOM05D003132 ORTHO05D003736 8.5e-36 156.4 283 31.1
VMungo1309G0264 Vigna mungo HOM05D003132 ORTHO05D003736 8.5e-36 156.4 277 32.9
Gohir.A06G040500 Gossypium hirsutum HOM05D003132 ORTHO05D003736 1.5e-35 155.6 277 33.2
Cpa.g.sc828.2 Carica papaya HOM05D003132 ORTHO05D003736 1.9e-35 155.2 284 32.4
Gohir.D06G041500 Gossypium hirsutum HOM05D003132 ORTHO05D003736 1.9e-35 155.2 277 33.2
ClCG06G009880 Citrullus lanatus HOM05D003132 ORTHO05D003736 2.5e-35 154.8 333 29.4
MBI03_g11133_MAGBIO Magnolia biondii HOM05D003132 ORTHO05D003736 2.5e-35 154.8 283 32.9
Glyma.04G254000 Glycine max HOM05D003132 ORTHO05D003736 3.2e-35 154.5 332 30.7
Sed0019762 Sechium edule HOM05D003132 ORTHO05D003736 3.2e-35 154.5 284 31.0
Thecc.08G116200 Theobroma cacao HOM05D003132 ORTHO05D003736 3.2e-35 154.5 276 33.0
MD00G1104300 Malus domestica HOM05D003132 ORTHO05D003736 4.2e-35 154.1 285 31.6
MELO3C008519.2 Cucumis melo HOM05D003132 ORTHO05D003736 5.5e-35 153.7 306 30.1
Glyma.06G108200 Glycine max HOM05D003132 ORTHO05D003736 7.2e-35 153.3 348 30.2
AT5G09320 Arabidopsis thaliana HOM05D003132 ORTHO05D003736 9.4e-35 152.9 285 33.7
EL10Ac1g00043 Beta vulgaris HOM05D003132 ORTHO05D003736 9.4e-35 152.9 277 30.7
Atru.chr13.2600 Acer truncatum HOM05D003132 ORTHO05D003736 1.6e-34 152.1 279 32.3
Actinidia29433 Actinidia chinensis HOM05D003132 ORTHO05D003736 1.6e-34 152.1 283 32.2
AUR62023605 Chenopodium quinoa HOM05D003132 ORTHO05D003736 1.6e-34 152.1 285 30.5
Zm00001eb064020 Zea mays HOM05D003132 ORTHO05D003736 1.6e-34 152.1 280 32.5
Prupe.8G002200 Prunus persica HOM05D003132 ORTHO05D003736 2.1e-34 151.8 329 30.1
COL.COLO4_21818 Corchorus olitorius HOM05D003132 ORTHO05D003736 2.7e-34 151.4 312 30.8
FvH4_2g00230 Fragaria vesca HOM05D003132 ORTHO05D003736 2.7e-34 151.4 308 29.2
CiPaw.06G024400 Carya illinoinensis HOM05D003132 ORTHO05D003736 3.6e-34 151.0 331 29.9
AUR62004688 Chenopodium quinoa HOM05D003132 ORTHO05D003736 3.6e-34 151.0 285 30.5
Potri.019G066200 Populus trichocarpa HOM05D003132 ORTHO05D003736 3.6e-34 151.0 279 30.5
PGR044G0368 Punica granatum HOM05D003132 ORTHO05D003736 4.7e-34 150.6 337 30.3
Hund20801 Selenicereus undatus HOM05D003132 ORTHO05D003736 4.7e-34 150.6 322 29.2
SGA_v2.0_scaffold118G32441 Striga asiatica HOM05D003132 ORTHO05D003736 4.7e-34 150.6 315 31.4
CSS0019182 Camellia sinensis var. sinensis HOM05D003132 ORTHO05D003736 6.1e-34 150.2 285 30.9
Cpa.g.sc249.17 Carica papaya HOM05D003132 ORTHO05D003736 6.1e-34 150.2 279 31.2
TAR628G0652 Trochodendron aralioides HOM05D003132 ORTHO05D003736 1.0e-33 149.4 279 30.8
Dinv26724 Davidia involucrata HOM05D003132 ORTHO05D003736 1.8e-33 148.7 334 29.3
MD15G1358700 Malus domestica HOM05D003132 ORTHO05D003736 3.0e-33 147.9 277 31.0
Rhsim12G0001000 Rhododendron simsii HOM05D003132 ORTHO05D003736 3.0e-33 147.9 331 30.2
unitig_21.g20190 Utricularia gibba HOM05D003132 ORTHO05D003736 3.0e-33 147.9 314 29.9
CARHR204070 Cardamine hirsuta HOM05D003132 ORTHO05D003736 4.0e-33 147.5 318 28.0
Dinv27388 Davidia involucrata HOM05D003132 ORTHO05D003736 4.0e-33 147.5 359 28.7
Duzib041G0476 Durio zibethinus HOM05D003132 ORTHO05D003736 5.2e-33 147.1 285 31.9
Duzib177G0974 Durio zibethinus HOM05D003132 ORTHO05D003736 8.8e-33 146.4 273 31.1
Sopen01g040690 Solanum pennellii HOM05D003132 ORTHO05D003736 8.8e-33 146.4 292 31.2
RcHm_v2.0_Chr6g0249521 Rosa chinensis HOM05D003132 ORTHO05D003736 1.2e-32 146.0 322 28.3
Actinidia01536 Actinidia chinensis HOM05D003132 ORTHO05D003736 1.5e-32 145.6 282 30.9
Ciclev10020271m.g Citrus clementina HOM05D003132 ORTHO05D003736 1.5e-32 145.6 314 27.7
Lsat_1_v5_gn_9_67980 Lactuca sativa HOM05D003132 ORTHO05D003736 2.0e-32 145.2 292 30.8
PRCOL_00006551 Prasinoderma coloniale HOM05D003132 ORTHO05D003736 2.0e-32 145.2 290 32.4
PGR102G0292 Punica granatum HOM05D003132 ORTHO05D003736 2.0e-32 145.2 279 30.5
Atru.chr13.1355 Acer truncatum HOM05D003132 ORTHO05D003736 3.3e-32 144.4 290 31.0
Hma1.2p1_0378F.1_g139670 Hydrangea macrophylla HOM05D003132 ORTHO05D003736 4.4e-32 144.1 279 30.1
Sabra05G0129000 Salix brachista HOM05D003132 ORTHO05D003736 5.7e-32 143.7 260 32.7
Lj3g0025144 Lotus japonicus HOM05D003132 ORTHO05D003736 7.5e-32 143.3 278 29.9
vmacro00793 Vaccinium macrocarpon HOM05D003132 ORTHO05D003736 7.5e-32 143.3 342 28.4
CiPaw.03G011700 Carya illinoinensis HOM05D003132 ORTHO05D003736 1.7e-31 142.1 285 29.5
Gohir.D08G251300 Gossypium hirsutum HOM05D003132 ORTHO05D003736 1.7e-31 142.1 346 30.3
Gorai.004G268000 Gossypium raimondii HOM05D003132 ORTHO05D003736 1.7e-31 142.1 346 30.3
Ah.05g172730 Amaranthus hybridus HOM05D003132 ORTHO05D003736 2.2e-31 141.7 259 31.7
Rhsim11G0064900 Rhododendron simsii HOM05D003132 ORTHO05D003736 2.2e-31 141.7 294 30.6
arahy.Tifrunner.gnm1.ann1.M3HMN7 Arachis hypogaea HOM05D003132 ORTHO05D003736 2.8e-31 141.4 279 31.2
HPP92_002181 Vanilla planifolia HOM05D003132 ORTHO05D003736 2.8e-31 141.4 326 29.8
CDE06G1857 Ceratophyllum demersum HOM05D003132 ORTHO05D003736 8.2e-31 139.8 228 34.2
Haze_00527 Corylus avellana HOM05D003132 ORTHO05D003736 8.2e-31 139.8 338 29.0
arahy.Tifrunner.gnm1.ann1.F59MVU Arachis hypogaea HOM05D003132 ORTHO05D003736 1.1e-30 139.4 279 30.8
Cre12.g547450 Chlamydomonas reinhardtii HOM05D003132 ORTHO05D003736 1.1e-30 139.4 328 27.7
HanXRQChr15g0496671 Helianthus annuus HOM05D003132 ORTHO05D003736 1.8e-30 138.7 278 29.5
FAN19G2774 Fragaria x ananassa HOM05D003132 ORTHO05D003736 2.4e-30 138.3 342 26.9
MD10G1001000 Malus domestica HOM05D003132 ORTHO05D003736 4.1e-30 137.5 279 30.5
Phvul.005G006600 Phaseolus vulgaris HOM05D003132 ORTHO05D003736 5.3e-30 137.1 278 30.9
Medtr3g009180 Medicago truncatula HOM05D003132 ORTHO05D003736 7.0e-30 136.7 278 29.5
Oeu001990.2 Olea europaea HOM05D003132 ORTHO05D003736 9.1e-30 136.3 304 29.9
ECA246G0273 Erigeron canadensis HOM05D003132 ORTHO05D003736 1.6e-29 135.6 288 28.1
Carub.0006s0787 Capsella rubella HOM05D003132 ORTHO05D003736 2.0e-29 135.2 283 30.7
FvH4_3g37600 Fragaria vesca HOM05D003132 ORTHO05D003736 2.0e-29 135.2 281 31.0
Manes.18G119900 Manihot esculenta HOM05D003132 ORTHO05D003736 2.7e-29 134.8 304 28.0
Gohir.A08G230900 Gossypium hirsutum HOM05D003132 ORTHO05D003736 3.5e-29 134.4 241 33.6
MBI03_g39997_MAGBIO Magnolia biondii HOM05D003132 ORTHO05D003736 4.5e-29 134.0 264 32.6
Glyma.04G116900 Glycine max HOM05D003132 ORTHO05D003736 5.9e-29 133.7 278 28.1
FAN24G0668 Fragaria x ananassa HOM05D003132 ORTHO05D003736 7.7e-29 133.3 350 26.0
Haze_14017 Corylus avellana HOM05D003132 ORTHO05D003736 1.0e-28 132.9 303 27.7
CsaV3_2G011340 Cucumis sativus L. HOM05D003132 ORTHO05D003736 2.2e-28 131.7 289 29.4
QL09p001110 Quercus lobata HOM05D003132 ORTHO05D003736 6.5e-28 130.2 302 28.1
Dinv22067 Davidia involucrata HOM05D003132 ORTHO05D003736 7.2e-27 126.7 235 32.3
Sp3g17790 Schrenkiella parvula HOM05D003132 ORTHO05D003736 7.2e-27 126.7 209 36.8
CiPaw.05G229400 Carya illinoinensis HOM05D003132 ORTHO05D003736 1.2e-26 125.9 251 33.1
BolC9t59562H Brassica oleracea HOM05D003132 ORTHO05D003736 2.1e-26 125.2 162 42.6
ATR0495G010 Amborella trichopoda HOM05D003132 ORTHO05D003736 2.7e-26 124.8 209 34.9
Cfa021494 Carpinus fangiana HOM05D003132 ORTHO05D003736 6.1e-26 123.6 323 26.0
Sabra19G0078500 Salix brachista HOM05D003132 ORTHO05D003736 6.1e-26 123.6 339 26.0
TPR.G16695 Trifolium pratense HOM05D003132 ORTHO05D003736 2.3e-25 121.7 278 27.0
Manes.02G158500 Manihot esculenta HOM05D003132 ORTHO05D003736 3.0e-25 121.3 162 40.1
Zm00001eb090720 Zea mays HOM05D003132 ORTHO05D003736 6.8e-25 120.2 230 32.2
Prupe.1G506400 Prunus persica HOM05D003132 ORTHO05D003736 8.8e-25 119.8 211 34.1
BcaB08g37217 Brassica carinata HOM05D003132 ORTHO05D003736 2.0e-24 118.6 122 47.5
Manes.18G072550 Manihot esculenta HOM05D003132 ORTHO05D003736 2.0e-24 118.6 122 46.7
Cc00_g24650 Coffea canephora HOM05D003132 ORTHO05D003736 7.5e-24 116.7 221 32.1
vmacro00917 Vaccinium macrocarpon HOM05D003132 ORTHO05D003736 6.3e-23 113.6 241 30.7
VMungo1080G0294 Vigna mungo HOM05D003132 ORTHO05D003736 6.3e-23 113.6 238 31.5
GSVIVG01037118001 Vitis vinifera HOM05D003132 ORTHO05D003736 6.3e-23 113.6 222 28.4
QL12p035360 Quercus lobata HOM05D003132 ORTHO05D003736 8.3e-23 113.2 350 25.4
Oeu039582.2 Olea europaea HOM05D003132 ORTHO05D003736 1.1e-22 112.8 420 23.3
Psat5g230840 Pisum sativum HOM05D003132 ORTHO05D003736 4.1e-22 110.9 222 28.8
Zm00001eb398120 Zea mays HOM05D003132 ORTHO05D003736 4.1e-22 110.9 122 45.9
Thecc.08G166600 Theobroma cacao HOM05D003132 ORTHO05D003736 5.4e-22 110.5 222 30.2
CDE04G2334 Ceratophyllum demersum HOM05D003132 ORTHO05D003736 4.5e-21 107.5 190 36.3
TWI12G0091 Tripterygium wilfordii HOM05D003132 ORTHO05D003736 6.5e-20 103.6 124 41.9
Lj9C693G4 Lonicera japonica HOM05D003132 ORTHO05D003736 2.5e-19 101.7 224 29.0
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.2e-15 88.6 195 31.3
COL.COLO4_25069 Corchorus olitorius HOM05D003132 ORTHO05D003736 1.1e-14 86.3 274 24.5
ATR1089G130 Amborella trichopoda HOM05D003132 ORTHO05D003736 1.2e-13 82.8 221 24.9
SEGI_27881 Sequoiadendron giganteum HOM05D003132 ORTHO05D003736 3.5e-13 81.3 100 44.0
Nn1g08540 Nelumbo nucifera HOM05D003132 ORTHO05D003736 7.3e-11 73.6 324 21.6
Ca_14120_v3 Cicer arietinum L. HOM05D003132 ORTHO05D003736 2.8e-10 71.6 113 33.6
Cfa026328 Carpinus fangiana HOM05D003132 ORTHO05D124228 6.1e-10 70.5 160 28.8
CSS0003734 Camellia sinensis var. sinensis HOM05D003132 ORTHO05D003736 1.8e-09 68.9 77 44.2
SHI23773 Sapria himalayana HOM05D003132 ORTHO05D003736 5.7e-08 63.9 75 42.7


User provided reference genes

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