Gene: Pp3c23_18370

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c23_18370
  • Transcript Identifier Pp3c23_18370V3.2
  • Gene Type Coding gene
  • Location Chr23 : 12132335-12135171 : negative

Gene Family Information

  • ID HOM05D003132
  • #Genes/#Species 219/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c23_18370V3.2
  • pacid 32950689
  • alias Pp1s49_250V6
  • alias Phypa_181478
  • alias Phpat.023G065500
  • uniprot A0A2K1IJX4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT3G19770
GO:0048528
ISO
PLAZA Integrative Orthologypost-embryonic root development AT3G19770
GO:0006886
ISO
PLAZA Integrative Orthologyintracellular protein transport Os03g0262900
GO:0045324
ISO
PLAZA Integrative Orthologylate endosome to vacuole transport AT3G19770
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G19770
GO:0000919
ISO
PLAZA Integrative Orthologycell plate assembly AT3G19770
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G19770
GO:0005085
IEA
GOA Databaseguanyl-nucleotide exchange factor activity
GO:0005085
IEA
InterProguanyl-nucleotide exchange factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000325
ISO
PLAZA Integrative Orthologyplant-type vacuole Os03g0262900
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G19770
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os03g0262900
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network Os03g0262900
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G19770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037191 VPS9 domain superfamily
IPR045046 Vacuolar protein sorting-associated protein 9-like
IPR041545 RABX5, catalytic core helical domain
IPR003123 VPS9 domain
Mapman id Description
22.3.4.5.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.RAB5 nucleotide exchange factor (VPS9)