Gene: AT5G09320

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G09320
  • Transcript Identifier AT5G09320.1
  • Gene Type Coding gene
  • Location Chr5 : 2890135-2892016 : negative

Gene Family Information

  • ID HOM05D003132
  • #Genes/#Species 219/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G09320.1
  • symbol VPS9B
  • uniprot F4KCK0

Descriptions

  • Description vacuolar protein sorting-associated 9A-like protein
  • Computational description VPS9B; CONTAINS InterPro DOMAIN/s: Vacuolar sorting protein 9, subgroup (InterPro:IPR013995), Vacuolar sorting protein 9 (InterPro:IPR003123); BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT3G19770.1); Has 1393 Blast hits to 1376 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 508; Fungi - 217; Plants - 509; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
Gene Ontologyvesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005085
IEA
Gene Ontologyguanyl-nucleotide exchange factor activity
GO:0005085
IEA
InterProguanyl-nucleotide exchange factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003123 VPS9 domain
IPR037191 VPS9 domain superfamily
IPR045046 Vacuolar protein sorting-associated protein 9-like
IPR041545 RABX5, catalytic core helical domain
Mapman id Description
22.3.4.5.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.RAB5 nucleotide exchange factor (VPS9)