Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026089 Carpinus fangiana HOM05D000327 ORTHO05D122952 3.2e-265 917.9 486 100.0
Cfa023670 Carpinus fangiana HOM05D000327 ORTHO05D000218 3.6e-22 110.5 272 27.2
AT3G45580 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 3.7e-11 73.9 204 28.4
CSS0005495 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 1.8e-10 71.6 194 26.3
BraA09t40969Z Brassica rapa HOM05D000327 ORTHO05D000218 3.1e-10 70.9 210 26.7
A09p55680 Brassica napus HOM05D000327 ORTHO05D000218 7.0e-10 69.7 180 27.2
HanXRQChr13g0401641 Helianthus annuus HOM05D000327 ORTHO05D000218 1.2e-09 68.9 184 24.5
AL5G21720 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 2.7e-09 67.8 207 26.6
Atru.chr10.604 Acer truncatum HOM05D000327 ORTHO05D000218 1.0e-08 65.9 194 24.7
Lsat_1_v5_gn_6_26441 Lactuca sativa HOM05D000327 ORTHO05D000218 1.0e-08 65.9 185 25.4
BolC8t51438H Brassica oleracea HOM05D000327 ORTHO05D000218 1.3e-08 65.5 181 26.5
CARHR114860 Cardamine hirsuta HOM05D000327 ORTHO05D000218 2.2e-08 64.7 210 24.8
Cfa000730 Carpinus fangiana HOM05D000327 ORTHO05D000218 2.2e-08 64.7 143 29.4
Haze_06012 Corylus avellana HOM05D000327 ORTHO05D000218 2.2e-08 64.7 143 28.7
ECA233G2889 Erigeron canadensis HOM05D000327 ORTHO05D000218 5.0e-08 63.5 184 23.4
C08p38670 Brassica napus HOM05D000327 ORTHO05D000218 6.5e-08 63.2 180 26.1
Carub.0005s1137 Capsella rubella HOM05D000327 ORTHO05D000218 6.5e-08 63.2 181 26.0
Carub.0004s0506 Capsella rubella HOM05D000327 ORTHO05D000218 8.5e-08 62.8 201 26.9
Carub.0005s0944 Capsella rubella HOM05D000327 ORTHO05D000218 8.5e-08 62.8 181 26.0
Dinv11865 Davidia involucrata HOM05D000327 ORTHO05D000218 8.5e-08 62.8 194 25.3
QL11p018227 Quercus lobata HOM05D000327 ORTHO05D000218 8.5e-08 62.8 143 27.3
Carub.0004s0504 Capsella rubella HOM05D000327 ORTHO05D000218 1.1e-07 62.4 199 24.1
Carub.0005s0953 Capsella rubella HOM05D000327 ORTHO05D000218 1.1e-07 62.4 187 26.2
MD05G1255900 Malus domestica HOM05D000327 ORTHO05D000218 1.1e-07 62.4 194 23.2
Duzib235G0173 Durio zibethinus HOM05D000327 ORTHO05D000218 1.5e-07 62.0 190 26.3
HanXRQChr15g0489061 Helianthus annuus HOM05D000327 ORTHO05D000218 1.9e-07 61.6 102 30.4
Prupe.4G108300 Prunus persica HOM05D000327 ORTHO05D000218 1.9e-07 61.6 189 24.3
Duzib160G0717 Durio zibethinus HOM05D000327 ORTHO05D000218 2.5e-07 61.2 195 24.1
AUR62043132 Chenopodium quinoa HOM05D000327 ORTHO05D000218 3.2e-07 60.8 189 25.4
COL.COLO4_30955 Corchorus olitorius HOM05D000327 ORTHO05D000218 3.2e-07 60.8 202 24.8
Prupe.6G115700 Prunus persica HOM05D000327 ORTHO05D000218 3.2e-07 60.8 213 23.5
Sopen02g018390 Solanum pennellii HOM05D000327 ORTHO05D000218 3.2e-07 60.8 107 32.7
PGSC0003DMG400021214 Solanum tuberosum HOM05D000327 ORTHO05D000218 3.2e-07 60.8 107 32.7
vmacro14469 Vaccinium macrocarpon HOM05D000327 ORTHO05D000218 3.2e-07 60.8 190 24.2
AT2G26135 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 4.2e-07 60.5 175 25.1
CSS0048794 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 4.2e-07 60.5 184 25.0
Carub.0005s0940 Capsella rubella HOM05D000327 ORTHO05D000218 4.2e-07 60.5 203 25.6
Cpa.g.sc135.38 Carica papaya HOM05D000327 ORTHO05D000218 4.2e-07 60.5 205 23.4
Eucgr.D01052 Eucalyptus grandis HOM05D000327 ORTHO05D000218 4.2e-07 60.5 194 23.7
Gohir.D05G146800 Gossypium hirsutum HOM05D000327 ORTHO05D000218 4.2e-07 60.5 194 24.2
Lj6g0026576 Lotus japonicus HOM05D000327 ORTHO05D000218 4.2e-07 60.5 184 27.2
Potri.012G119000 Populus trichocarpa HOM05D000327 ORTHO05D000218 4.2e-07 60.5 137 29.9
Rhsim01G0220400 Rhododendron simsii HOM05D000327 ORTHO05D000218 4.2e-07 60.5 190 24.7
Solyc02g069230.3 Solanum lycopersicum HOM05D000327 ORTHO05D000218 4.2e-07 60.5 107 32.7
unitig_37.g12057 Utricularia gibba HOM05D000327 ORTHO05D000218 4.2e-07 60.5 100 31.0
AT3G45470 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 5.5e-07 60.1 179 26.3
CSS0019482 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 5.5e-07 60.1 194 24.2
CSS0046162 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 5.5e-07 60.1 194 24.2
CANSAT35G0541 Cannabis sativa HOM05D000327 ORTHO05D000218 5.5e-07 60.1 188 22.9
Ciclev10014925m.g Citrus clementina HOM05D000327 ORTHO05D000218 5.5e-07 60.1 194 25.8
FvH4_3g33450 Fragaria vesca HOM05D000327 ORTHO05D000218 5.5e-07 60.1 200 25.5
HanXRQChr13g0401571 Helianthus annuus HOM05D000327 ORTHO05D000218 5.5e-07 60.1 205 23.4
Nn7g38067 Nelumbo nucifera HOM05D000327 ORTHO05D000218 5.5e-07 60.1 189 24.3
Nitab4.5_0001876g0070 Nicotiana tabacum HOM05D000327 ORTHO05D000218 5.5e-07 60.1 137 29.9
Carub.0007s3273 Capsella rubella HOM05D000327 ORTHO05D000218 7.2e-07 59.7 193 24.4
CARHR116080 Cardamine hirsuta HOM05D000327 ORTHO05D000218 7.2e-07 59.7 69 44.9
Gohir.A05G144400 Gossypium hirsutum HOM05D000327 ORTHO05D000218 7.2e-07 59.7 194 24.2
Gorai.009G150700 Gossypium raimondii HOM05D000327 ORTHO05D000218 7.2e-07 59.7 194 24.2
HanXRQChr13g0401621 Helianthus annuus HOM05D000327 ORTHO05D000218 7.2e-07 59.7 182 24.2
vmacro03500 Vaccinium macrocarpon HOM05D000327 ORTHO05D000218 7.2e-07 59.7 195 24.1
CARHR089170 Cardamine hirsuta HOM05D000327 ORTHO05D000218 9.4e-07 59.3 203 23.6
CiPaw.09G079300 Carya illinoinensis HOM05D000327 ORTHO05D000218 9.4e-07 59.3 143 27.3
Glyma.15G126500 Glycine max HOM05D000327 ORTHO05D000218 9.4e-07 59.3 111 32.4
HanXRQChr13g0401631 Helianthus annuus HOM05D000327 ORTHO05D000218 9.4e-07 59.3 102 28.4
SMO147G0272 Selaginella moellendorffii HOM05D000327 ORTHO05D000218 9.4e-07 59.3 95 32.6
CAN.G1202.9 Capsicum annuum HOM05D000327 ORTHO05D000218 1.2e-06 58.9 137 29.2
AUR62036831 Chenopodium quinoa HOM05D000327 ORTHO05D000218 1.2e-06 58.9 102 30.4
Duzib168G0309 Durio zibethinus HOM05D000327 ORTHO05D000218 1.2e-06 58.9 187 23.5
PGR083G0861 Punica granatum HOM05D000327 ORTHO05D000218 1.2e-06 58.9 243 22.6
Sed0004947 Sechium edule HOM05D000327 ORTHO05D000218 1.2e-06 58.9 179 27.4
Sed0026999 Sechium edule HOM05D000327 ORTHO05D000218 1.2e-06 58.9 94 33.0
TAR626G1690 Trochodendron aralioides HOM05D000327 ORTHO05D000218 1.2e-06 58.9 195 24.1
VMungo0540G1796 Vigna mungo HOM05D000327 ORTHO05D000218 1.2e-06 58.9 189 24.9
Aqoxy1G01492 Aquilegia oxysepala HOM05D000327 ORTHO05D000218 1.6e-06 58.5 106 30.2
Carub.0004s0505 Capsella rubella HOM05D000327 ORTHO05D000218 1.6e-06 58.5 183 26.2
HanXRQChr13g0401561 Helianthus annuus HOM05D000327 ORTHO05D000218 1.6e-06 58.5 202 22.3
Thecc.09G260500 Theobroma cacao HOM05D000327 ORTHO05D000218 1.6e-06 58.5 187 24.6
CSS0027721 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 2.1e-06 58.2 195 24.1
CiPaw.10G065900 Carya illinoinensis HOM05D000327 ORTHO05D000218 2.1e-06 58.2 137 28.5
MD10G1236000 Malus domestica HOM05D000327 ORTHO05D000218 2.1e-06 58.2 194 22.7
Manes.16G047576 Manihot esculenta HOM05D000327 ORTHO05D000218 2.1e-06 58.2 143 28.0
Peaxi162Scf00623g00313 Petunia axillaris HOM05D000327 ORTHO05D000218 2.1e-06 58.2 107 31.8
Aqoxy4G03199 Aquilegia oxysepala HOM05D000327 ORTHO05D000218 2.7e-06 57.8 188 25.5
AL5G24170 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 2.7e-06 57.8 194 24.7
Thhalv10022329m.g Eutrema salsugineum HOM05D000327 ORTHO05D000218 2.7e-06 57.8 206 22.3
HanXRQChr13g0401451 Helianthus annuus HOM05D000327 ORTHO05D000218 2.7e-06 57.8 190 25.3
HanXRQChr13g0401591 Helianthus annuus HOM05D000327 ORTHO05D000218 2.7e-06 57.8 190 25.3
HanXRQChr13g0401671 Helianthus annuus HOM05D000327 ORTHO05D000218 2.7e-06 57.8 185 22.7
Lalb_Chr09g0328781 Lupinus albus HOM05D000327 ORTHO05D000218 2.7e-06 57.8 113 31.0
MBI18_g04365_MAGBIO Magnolia biondii HOM05D000327 ORTHO05D000218 2.7e-06 57.8 189 23.3
PSO541G6330 Papaver somniferum HOM05D000327 ORTHO05D000218 2.7e-06 57.8 191 24.1
PSO675G0479 Papaver somniferum HOM05D000327 ORTHO05D000218 2.7e-06 57.8 191 24.1
Phvul.006G131900 Phaseolus vulgaris HOM05D000327 ORTHO05D000218 2.7e-06 57.8 113 31.9
Rhsim13G0129700 Rhododendron simsii HOM05D000327 ORTHO05D000218 2.7e-06 57.8 194 23.2
SGA_v2.0_scaffold535G52769 Striga asiatica HOM05D000327 ORTHO05D000218 2.7e-06 57.8 199 24.1
TWI38G1261 Tripterygium wilfordii HOM05D000327 ORTHO05D000218 2.7e-06 57.8 191 23.0
Duzib192G0490 Durio zibethinus HOM05D000327 ORTHO05D000218 3.6e-06 57.4 189 24.3
ECA233G0642 Erigeron canadensis HOM05D000327 ORTHO05D000218 3.6e-06 57.4 196 23.0
Glyma.09G020000 Glycine max HOM05D000327 ORTHO05D000218 3.6e-06 57.4 188 25.0
SMO330G0011 Selaginella moellendorffii HOM05D000327 ORTHO05D000218 3.6e-06 57.4 96 30.2
Actinidia22379 Actinidia chinensis HOM05D000327 ORTHO05D000218 4.7e-06 57.0 195 23.1
Aa31LG4G14710 Aethionema arabicum HOM05D000327 ORTHO05D000218 4.7e-06 57.0 194 24.7
Lj6g0022216 Lotus japonicus HOM05D000327 ORTHO05D000218 4.7e-06 57.0 196 23.0
Lalb_Chr16g0385331 Lupinus albus HOM05D000327 ORTHO05D000218 4.7e-06 57.0 196 22.4
Pp3c16_13540 Physcomitrium patens HOM05D000327 ORTHO05D000218 4.7e-06 57.0 186 25.3
Prupe.6G115600 Prunus persica HOM05D000327 ORTHO05D000218 4.7e-06 57.0 199 25.6
Zm00001eb032750 Zea mays HOM05D000327 ORTHO05D000218 4.7e-06 57.0 193 24.9
Cre05.g238374 Chlamydomonas reinhardtii HOM05D000327 ORTHO05D000218 6.1e-06 56.6 189 25.9
Mapoly0010s0070 Marchantia polymorpha HOM05D000327 ORTHO05D000218 6.1e-06 56.6 151 23.8
Nitab4.5_0003027g0050 Nicotiana tabacum HOM05D000327 ORTHO05D000218 6.1e-06 56.6 137 29.2
Ca_18777_v3 Cicer arietinum L. HOM05D000327 ORTHO05D000218 8.0e-06 56.2 114 32.5
Haze_15184 Corylus avellana HOM05D000327 ORTHO05D000218 8.0e-06 56.2 206 24.8
Hma1.2p1_0092F.1_g046800 Hydrangea macrophylla HOM05D000327 ORTHO05D000218 8.0e-06 56.2 193 24.4
Lj1A1142T64 Lonicera japonica HOM05D000327 ORTHO05D000218 8.0e-06 56.2 107 27.1
Peaxi162Scf00275g00003 Petunia axillaris HOM05D000327 ORTHO05D000218 8.0e-06 56.2 178 23.0


User provided reference genes

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