Gene: Glyma.09G020000

General Information

Structural Information

  • Species Glycine max
  • Gene Identifier Glyma.09G020000
  • Transcript Identifier Glyma.09G020000.1
  • Gene Type Coding gene
  • Location Gm09 : 1576805-1581290 : negative

Gene Family Information

  • ID HOM05D000327
  • #Genes/#Species 1418/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Glyma.09G020000.Wm82.a4.v1
  • pacid 41134186
  • synonym Glyma09g02340
  • uniprot I1L0B2

Descriptions

  • Description PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0032436
IBA
GOA Databasepositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006278
IEA
GOA DatabaseRNA-dependent DNA biosynthetic process
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0004523
IEA
GOA DatabaseRNA-DNA hybrid ribonuclease activity
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003964
IEA
GOA DatabaseRNA-directed DNA polymerase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
IBA
GOA Databaseubiquitin ligase complex
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR036397 Ribonuclease H superfamily
IPR002867 IBR domain
IPR002156 Ribonuclease H domain
IPR031127 E3 ubiquitin ligase RBR family
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
19.2.2.1.4.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)