Gene: PSO541G6330
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO541G6330
- Transcript Identifier PSO541G6330.02
- Gene Type Coding gene
- Location NC_039363.1 : 165475980-165479386 : positive
Gene Family Information
- ID HOM05D000327
- #Genes/#Species 1418/97
- Phylogenetic origin
- ID ORTHO05D000218
- #Genes/#Species 1364/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026539473.1
- pid XP_026395258.1
- id gene-LOC113290008
Descriptions
- product probable E3 ubiquitin-protein ligase ARI7, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR018957 | Zinc finger, C3HC4 RING-type |
| IPR031127 | E3 ubiquitin ligase RBR family |
| IPR002867 | IBR domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR002156 | Ribonuclease H domain |
| IPR001841 | Zinc finger, RING-type |
| IPR036397 | Ribonuclease H superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.4.4 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA) |