Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 3.7e-211 738.0 398 100.0
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 6.3e-33 146.0 334 33.2
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 4.1e-32 143.3 334 33.5
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.6e-31 140.6 333 32.7
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 4.5e-31 139.8 334 33.5
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 5.9e-31 139.4 340 32.6
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 7.7e-31 139.0 334 33.2
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.7e-30 137.9 338 33.1
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 1.7e-30 137.9 335 32.5
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.9e-30 137.1 334 32.6
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 3.8e-30 136.7 338 32.8
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 7.2e-29 132.5 334 32.0
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 9.4e-29 132.1 334 31.1
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 1.6e-28 131.3 336 32.7
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 2.7e-28 130.6 342 31.0
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 3.6e-28 130.2 312 32.1
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 4.7e-28 129.8 334 29.6
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 4.7e-28 129.8 335 31.0
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 4.7e-28 129.8 334 30.5
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 1.0e-27 128.6 342 31.3
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.4e-27 128.3 334 29.3
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.4e-27 128.3 334 30.5
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 1.8e-27 127.9 322 31.7
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 1.8e-27 127.9 334 31.1
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 2.3e-27 127.5 353 30.9
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 3.0e-27 127.1 351 30.8
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 3.9e-27 126.7 353 31.2
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 3.9e-27 126.7 341 31.4
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 3.9e-27 126.7 334 31.1
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 5.1e-27 126.3 353 31.2
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 6.7e-27 125.9 334 30.8
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 6.7e-27 125.9 334 29.3
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 6.7e-27 125.9 342 30.7
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 8.8e-27 125.6 349 30.7
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 1.1e-26 125.2 336 29.5
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.1e-26 125.2 334 29.9
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 1.1e-26 125.2 337 31.5
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.5e-26 124.8 342 30.1
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.0e-26 124.4 337 30.0
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 2.6e-26 124.0 336 29.5
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 2.6e-26 124.0 335 30.4
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 4.4e-26 123.2 349 30.4
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 4.4e-26 123.2 334 30.5
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 7.4e-26 122.5 335 31.0
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 7.4e-26 122.5 339 31.3
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 9.7e-26 122.1 346 30.3
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 9.7e-26 122.1 352 29.8
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 9.7e-26 122.1 334 30.8
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 9.7e-26 122.1 357 28.9
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 1.3e-25 121.7 355 29.0
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 1.7e-25 121.3 340 30.0
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 1.7e-25 121.3 334 29.0
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 1.7e-25 121.3 335 28.4
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 2.2e-25 120.9 352 29.5
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 2.8e-25 120.6 334 30.8
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 3.7e-25 120.2 334 30.8
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 6.3e-25 119.4 335 31.0
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 6.3e-25 119.4 334 28.7
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 1.1e-24 118.6 334 30.2
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.8e-24 117.9 339 29.5
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 1.8e-24 117.9 334 29.3
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 1.8e-24 117.9 334 29.3
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 2.4e-24 117.5 348 29.9
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 2.4e-24 117.5 332 28.6
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 4.1e-24 116.7 339 29.2
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 7.0e-24 115.9 334 29.6
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 7.0e-24 115.9 335 29.6
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 9.1e-24 115.5 335 30.1
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 9.1e-24 115.5 335 30.1
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.1e-24 115.5 346 30.3
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.1e-24 115.5 347 29.1
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 2.0e-23 114.4 310 30.6
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 2.0e-23 114.4 339 29.2
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.6e-23 114.0 353 28.6
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 3.5e-23 113.6 335 29.6
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.5e-23 113.6 336 27.7
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 4.5e-23 113.2 338 29.0
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 7.7e-23 112.5 338 28.4
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.0e-22 112.1 336 28.9
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.3e-22 111.7 335 27.8
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.2e-22 110.9 335 29.3
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.2e-22 110.9 341 28.7
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 2.9e-22 110.5 343 30.3
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 2.9e-22 110.5 335 27.5
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 6.5e-22 109.4 337 30.0
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 6.5e-22 109.4 335 27.5
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 1.6e-20 104.8 209 35.4
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.7e-20 104.0 164 37.2
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 8.0e-20 102.4 213 32.4
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 8.0e-20 102.4 170 36.5
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 2.3e-19 100.9 208 32.2
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.1e-18 98.6 330 29.1
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 3.7e-17 93.6 131 39.7
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 4.1e-16 90.1 99 46.5
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.6e-15 88.2 125 42.4
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 1.6e-15 88.2 138 37.0
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 2.5e-13 80.9 295 28.1
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 8.0e-12 75.9 302 26.8
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 4.0e-11 73.6 286 26.6
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.5e-10 71.6 291 26.5
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 1.5e-10 71.6 77 41.6
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.5e-10 71.6 165 33.3
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 2.6e-10 70.9 297 26.6
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 2.8e-09 67.4 284 26.1
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 4.8e-09 66.6 298 29.2
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 1.1e-08 65.5 274 26.6
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 1.1e-08 65.5 288 28.1
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 1.4e-08 65.1 313 25.6
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 2.4e-08 64.3 232 26.7
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 9.1e-08 62.4 276 25.0
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 2.7e-07 60.8 229 27.5
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 3.5e-07 60.5 137 36.5
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.3e-06 58.5 115 36.5
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 3.8e-06 57.0 203 29.6


User provided reference genes

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