Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025477 Carpinus fangiana HOM05D003434 ORTHO05D004465 2.1e-183 645.6 326 100.0
Cre02.g095400 Chlamydomonas reinhardtii HOM05D003434 ORTHO05D004465 9.9e-69 264.6 272 48.5
Aqoxy4G01062 Aquilegia oxysepala HOM05D003434 ORTHO05D004465 1.4e-62 244.2 266 46.2
EL10Ac9g22818 Beta vulgaris HOM05D003434 ORTHO05D004465 1.8e-62 243.8 299 43.5
Dinv08315 Davidia involucrata HOM05D003434 ORTHO05D002822 4.0e-62 242.7 283 43.8
MBI01_g15748_MAGBIO Magnolia biondii HOM05D003434 ORTHO05D004465 4.0e-62 242.7 281 43.4
Zm00001eb245760 Zea mays HOM05D003434 ORTHO05D004465 6.9e-62 241.9 274 43.8
CDE07G1591 Ceratophyllum demersum HOM05D003434 ORTHO05D004465 2.0e-61 240.4 269 44.6
CANSAT78G2387 Cannabis sativa HOM05D003434 ORTHO05D004465 2.6e-61 240.0 276 43.5
CiPaw.11G173200 Carya illinoinensis HOM05D003434 ORTHO05D004465 2.6e-61 240.0 267 45.3
Solyc04g016380.3 Solanum lycopersicum HOM05D003434 ORTHO05D004465 2.6e-61 240.0 289 43.6
PGSC0003DMG400012714 Solanum tuberosum HOM05D003434 ORTHO05D004465 2.6e-61 240.0 287 44.6
TWI38G2119 Tripterygium wilfordii HOM05D003434 ORTHO05D004465 2.6e-61 240.0 269 44.2
Sc21g0001090 Simmondsia chinensis HOM05D003434 ORTHO05D004465 4.5e-61 239.2 276 45.3
CAN.G1237.13 Capsicum annuum HOM05D003434 ORTHO05D004465 5.8e-61 238.8 262 45.4
TAR626G1243 Trochodendron aralioides HOM05D003434 ORTHO05D004465 5.8e-61 238.8 265 44.5
GSVIVG01028448001 Vitis vinifera HOM05D003434 ORTHO05D004465 5.8e-61 238.8 281 43.4
AUR62017579 Chenopodium quinoa HOM05D003434 ORTHO05D004465 7.6e-61 238.4 267 44.9
AagrBONN_evm.TU.Sc2ySwM_344.2838 Anthoceros agrestis HOM05D003434 ORTHO05D004465 9.9e-61 238.0 301 42.5
Haze_07077 Corylus avellana HOM05D003434 ORTHO05D004465 9.9e-61 238.0 281 43.4
Os02g0591800 Oryza sativa ssp. japonica HOM05D003434 ORTHO05D004465 9.9e-61 238.0 274 44.2
Peaxi162Scf00130g00826 Petunia axillaris HOM05D003434 ORTHO05D004465 9.9e-61 238.0 280 45.0
vmacro19412 Vaccinium macrocarpon HOM05D003434 ORTHO05D004465 9.9e-61 238.0 265 45.3
Medtr1g012990 Medicago truncatula HOM05D003434 ORTHO05D004465 1.3e-60 237.7 292 42.8
vmacro11838 Vaccinium macrocarpon HOM05D003434 ORTHO05D004465 1.3e-60 237.7 265 45.3
Nn1g07032 Nelumbo nucifera HOM05D003434 ORTHO05D004465 1.7e-60 237.3 265 44.5
Pp3c16_10600 Physcomitrium patens HOM05D003434 ORTHO05D004465 1.7e-60 237.3 292 45.9
Rhsim06G0196400 Rhododendron simsii HOM05D003434 ORTHO05D004465 1.7e-60 237.3 265 44.5
Lsat_1_v5_gn_9_57521 Lactuca sativa HOM05D003434 ORTHO05D004465 2.2e-60 236.9 276 43.5
Lj1A848T59 Lonicera japonica HOM05D003434 ORTHO05D004465 2.2e-60 236.9 264 45.1
Lj8A158G80 Lonicera japonica HOM05D003434 ORTHO05D004465 2.2e-60 236.9 290 43.1
Nitab4.5_0001618g0180 Nicotiana tabacum HOM05D003434 ORTHO05D004465 2.2e-60 236.9 287 43.6
CiPaw.12G120800 Carya illinoinensis HOM05D003434 ORTHO05D004465 2.9e-60 236.5 267 44.2
Lsat_1_v5_gn_7_105060 Lactuca sativa HOM05D003434 ORTHO05D004465 2.9e-60 236.5 265 44.2
Nitab4.5_0000826g0070 Nicotiana tabacum HOM05D003434 ORTHO05D004465 2.9e-60 236.5 287 43.2
AUR62015117 Chenopodium quinoa HOM05D003434 ORTHO05D004465 3.8e-60 236.1 267 44.6
Hma1.2p1_2288F.1_g318950 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 3.8e-60 236.1 281 41.6
Manes.12G076100 Manihot esculenta HOM05D003434 ORTHO05D004465 3.8e-60 236.1 267 44.9
CSS0016315 Camellia sinensis var. sinensis HOM05D003434 ORTHO05D004465 4.9e-60 235.7 269 43.9
Haze_09473 Corylus avellana HOM05D003434 ORTHO05D004465 4.9e-60 235.7 269 44.6
Haze_09477 Corylus avellana HOM05D003434 ORTHO05D004465 4.9e-60 235.7 269 44.6
Mapoly0044s0007 Marchantia polymorpha HOM05D003434 ORTHO05D004465 4.9e-60 235.7 269 46.5
FAN25G0934 Fragaria x ananassa HOM05D003434 ORTHO05D004465 6.4e-60 235.3 301 41.5
MCO15G262 Micromonas commoda HOM05D003434 ORTHO05D004465 6.4e-60 235.3 259 44.4
Cfa020548 Carpinus fangiana HOM05D003434 ORTHO05D004465 8.4e-60 235.0 281 43.1
Cc05_g12350 Coffea canephora HOM05D003434 ORTHO05D004465 8.4e-60 235.0 265 45.7
HanXRQChr10g0306991 Helianthus annuus HOM05D003434 ORTHO05D004465 8.4e-60 235.0 265 44.2
HanXRQChr12g0374331 Helianthus annuus HOM05D003434 ORTHO05D004465 8.4e-60 235.0 265 44.2
FvH4_3g20570 Fragaria vesca HOM05D003434 ORTHO05D004465 1.1e-59 234.6 301 41.5
Gohir.D11G296500 Gossypium hirsutum HOM05D003434 ORTHO05D004465 1.1e-59 234.6 294 42.5
RcHm_v2.0_Chr5g0034581 Rosa chinensis HOM05D003434 ORTHO05D004465 1.4e-59 234.2 278 43.2
ECA236G4345 Erigeron canadensis HOM05D003434 ORTHO05D004465 1.9e-59 233.8 290 42.1
Prupe.4G185500 Prunus persica HOM05D003434 ORTHO05D004465 1.9e-59 233.8 301 41.9
Potri.011G122200 Populus trichocarpa HOM05D003434 ORTHO05D004465 2.4e-59 233.4 292 41.8
Ca_13044_v3 Cicer arietinum L. HOM05D003434 ORTHO05D004465 3.2e-59 233.0 292 42.1
FAN16G2559 Fragaria x ananassa HOM05D003434 ORTHO05D004465 3.2e-59 233.0 301 41.5
Gohir.A11G282773 Gossypium hirsutum HOM05D003434 ORTHO05D004465 3.2e-59 233.0 286 42.3
MD11G1241800 Malus domestica HOM05D003434 ORTHO05D004465 3.2e-59 233.0 301 41.9
Thecc.07G077100 Theobroma cacao HOM05D003434 ORTHO05D004465 3.2e-59 233.0 286 42.0
arahy.Tifrunner.gnm1.ann1.L3HXPU Arachis hypogaea HOM05D003434 ORTHO05D004465 4.2e-59 232.6 265 45.3
Ca_05552_v3 Cicer arietinum L. HOM05D003434 ORTHO05D004465 4.2e-59 232.6 274 43.4
Hund24214 Selenicereus undatus HOM05D003434 ORTHO05D004465 4.2e-59 232.6 290 43.4
Actinidia09989 Actinidia chinensis HOM05D003434 ORTHO05D004465 5.5e-59 232.3 267 44.2
COL.COLO4_09433 Corchorus olitorius HOM05D003434 ORTHO05D004465 5.5e-59 232.3 286 41.6
Hma1.2p1_1789F.1_g302480 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 5.5e-59 232.3 265 42.6
Medtr7g069430 Medicago truncatula HOM05D003434 ORTHO05D004465 5.5e-59 232.3 292 42.8
PSO832G4191 Papaver somniferum HOM05D003434 ORTHO05D004465 5.5e-59 232.3 299 40.8
PGR083G2248 Punica granatum HOM05D003434 ORTHO05D004465 5.5e-59 232.3 267 43.8
arahy.Tifrunner.gnm1.ann1.LC97RS Arachis hypogaea HOM05D003434 ORTHO05D004465 7.1e-59 231.9 265 45.3
MD03G1224000 Malus domestica HOM05D003434 ORTHO05D004465 7.1e-59 231.9 290 42.4
Peaxi162Scf00069g00118 Petunia axillaris HOM05D003434 ORTHO05D004465 7.1e-59 231.9 262 44.3
Phvul.011G077301 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 7.1e-59 231.9 265 45.3
SalBow4G3038 Salvia bowleyana HOM05D003434 ORTHO05D004465 7.1e-59 231.9 265 43.8
unitig_0.g2416 Utricularia gibba HOM05D003434 ORTHO05D004465 7.1e-59 231.9 267 44.2
Psat6g028560 Pisum sativum HOM05D003434 ORTHO05D004465 9.3e-59 231.5 274 43.1
Sed0008309 Sechium edule HOM05D003434 ORTHO05D004465 9.3e-59 231.5 292 41.8
SGA_v2.0_scaffold9G04937 Striga asiatica HOM05D003434 ORTHO05D004465 9.3e-59 231.5 304 41.4
TPR.G27919 Trifolium pratense HOM05D003434 ORTHO05D004465 9.3e-59 231.5 274 43.4
ATR0605G144 Amborella trichopoda HOM05D003434 ORTHO05D004465 1.2e-58 231.1 270 44.8
Lalb_Chr04g0258261 Lupinus albus HOM05D003434 ORTHO05D004465 1.2e-58 231.1 267 44.2
PSO017G4384 Papaver somniferum HOM05D003434 ORTHO05D004465 1.2e-58 231.1 299 40.8
Phvul.008G022950 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 1.2e-58 231.1 267 43.8
Sabra11G0108200 Salix brachista HOM05D003434 ORTHO05D002822 1.2e-58 231.1 292 41.4
VMungo1383G3569 Vigna mungo HOM05D003434 ORTHO05D004465 1.2e-58 231.1 272 43.4
CARHR090510 Cardamine hirsuta HOM05D003434 ORTHO05D004465 1.6e-58 230.7 267 43.4
Ciclev10008977m.g Citrus clementina HOM05D003434 ORTHO05D004465 1.6e-58 230.7 269 43.1
FAN21G0310 Fragaria x ananassa HOM05D003434 ORTHO05D004465 1.6e-58 230.7 301 40.5
PSO170G0766 Papaver somniferum HOM05D003434 ORTHO05D004465 1.6e-58 230.7 274 43.1
Duzib213G0358 Durio zibethinus HOM05D003434 ORTHO05D004465 2.1e-58 230.3 286 42.0
A05p33960 Brassica napus HOM05D003434 ORTHO05D004465 2.7e-58 229.9 267 43.4
C05p51700 Brassica napus HOM05D003434 ORTHO05D004465 2.7e-58 229.9 267 43.4
BraA05t22218Z Brassica rapa HOM05D003434 ORTHO05D004465 2.7e-58 229.9 267 43.4
Eucgr.F01099 Eucalyptus grandis HOM05D003434 ORTHO05D004465 3.5e-58 229.6 290 42.8
Glyma.18G278000 Glycine max HOM05D003434 ORTHO05D004465 3.5e-58 229.6 292 42.5
Lalb_Chr17g0340551 Lupinus albus HOM05D003434 ORTHO05D004465 3.5e-58 229.6 267 43.8
MELO3C015338.2 Cucumis melo HOM05D003434 ORTHO05D004465 4.6e-58 229.2 293 42.0
PSO210G2253 Papaver somniferum HOM05D003434 ORTHO05D004465 4.6e-58 229.2 299 40.1
Glyma.02G114000 Glycine max HOM05D003434 ORTHO05D004465 6.0e-58 228.8 267 43.1
Sp1g39500 Schrenkiella parvula HOM05D003434 ORTHO05D004465 6.0e-58 228.8 293 41.6
THA.LOC104818062 Tarenaya hassleriana HOM05D003434 ORTHO05D004465 6.0e-58 228.8 292 41.4
Glyma.08G255000 Glycine max HOM05D003434 ORTHO05D004465 7.9e-58 228.4 283 42.8
Potri.001G403100 Populus trichocarpa HOM05D003434 ORTHO05D004465 7.9e-58 228.4 267 43.8
Sed0012815 Sechium edule HOM05D003434 ORTHO05D004465 7.9e-58 228.4 293 42.3
SMO353G0304 Selaginella moellendorffii HOM05D003434 ORTHO05D004465 7.9e-58 228.4 262 43.1
THA.LOC104815549 Tarenaya hassleriana HOM05D003434 ORTHO05D004465 7.9e-58 228.4 292 41.4
A01p38760 Brassica napus HOM05D003434 ORTHO05D004465 1.0e-57 228.0 292 41.8
DCAR_020982 Daucus carota HOM05D003434 ORTHO05D004465 1.0e-57 228.0 280 43.2
FAN11G3195 Fragaria x ananassa HOM05D003434 ORTHO05D004465 1.0e-57 228.0 267 43.1
Sopen04g008470 Solanum pennellii HOM05D003434 ORTHO05D004465 1.0e-57 228.0 310 40.6
A03p39310 Brassica napus HOM05D003434 ORTHO05D004465 1.3e-57 227.6 267 43.1
BraA03t13081Z Brassica rapa HOM05D003434 ORTHO05D004465 1.3e-57 227.6 267 43.1
DCAR_019543 Daucus carota HOM05D003434 ORTHO05D004465 1.3e-57 227.6 265 43.4
Oeu011677.2 Olea europaea HOM05D003434 ORTHO05D004465 1.3e-57 227.6 309 41.4
Lj1g0009928 Lotus japonicus HOM05D003434 ORTHO05D004465 1.8e-57 227.3 274 42.7
BcaB06g29579 Brassica carinata HOM05D003434 ORTHO05D004465 2.3e-57 226.9 295 42.4
C01p49000 Brassica napus HOM05D003434 ORTHO05D004465 2.3e-57 226.9 292 41.8
Cpa.g.sc80.31 Carica papaya HOM05D003434 ORTHO05D004465 2.3e-57 226.9 267 42.3
Sp3g13710 Schrenkiella parvula HOM05D003434 ORTHO05D004465 2.3e-57 226.9 286 41.6
BcaB06g29576 Brassica carinata HOM05D003434 ORTHO05D004465 3.0e-57 226.5 267 43.1
BcaC01g03873 Brassica carinata HOM05D003434 ORTHO05D004465 3.0e-57 226.5 267 42.7
C03p47690 Brassica napus HOM05D003434 ORTHO05D004465 3.0e-57 226.5 267 42.7
BolC3t17044H Brassica oleracea HOM05D003434 ORTHO05D004465 3.0e-57 226.5 267 42.7
CARHR043150 Cardamine hirsuta HOM05D003434 ORTHO05D004465 3.9e-57 226.1 292 40.8
Oeu019344.1 Olea europaea HOM05D003434 ORTHO05D004465 3.9e-57 226.1 278 42.4
AT1G52930 Arabidopsis thaliana HOM05D003434 ORTHO05D004465 5.1e-57 225.7 267 41.9
Psat6g129960 Pisum sativum HOM05D003434 ORTHO05D004465 5.1e-57 225.7 280 41.4
AL3G28010 Arabidopsis lyrata HOM05D003434 ORTHO05D004465 6.7e-57 225.3 278 41.0
BcaB04g20924 Brassica carinata HOM05D003434 ORTHO05D004465 8.7e-57 224.9 292 41.4
Thhalv10021159m.g Eutrema salsugineum HOM05D003434 ORTHO05D004465 8.7e-57 224.9 267 42.7
Aa31LG10G2140 Aethionema arabicum HOM05D003434 ORTHO05D004465 1.1e-56 224.6 292 40.4
Aa31LG8G2690 Aethionema arabicum HOM05D003434 ORTHO05D004465 1.1e-56 224.6 269 42.4
Thhalv10011666m.g Eutrema salsugineum HOM05D003434 ORTHO05D004465 1.5e-56 224.2 267 42.3
Gorai.007G319600 Gossypium raimondii HOM05D003434 ORTHO05D004465 2.5e-56 223.4 298 40.6
BolC1t04864H Brassica oleracea HOM05D003434 ORTHO05D004465 3.3e-56 223.0 292 41.4
Carub.0001s4208 Capsella rubella HOM05D003434 ORTHO05D004465 4.3e-56 222.6 292 39.7
QL08p019759 Quercus lobata HOM05D003434 ORTHO05D004465 5.6e-56 222.2 292 40.1
BolC5t33857H Brassica oleracea HOM05D003434 ORTHO05D004465 7.4e-56 221.9 268 42.9
Carub.0003s1518 Capsella rubella HOM05D003434 ORTHO05D004465 7.4e-56 221.9 267 41.9
AT3G15460 Arabidopsis thaliana HOM05D003434 ORTHO05D004465 1.3e-55 221.1 269 40.9
Duzib170G0474 Durio zibethinus HOM05D003434 ORTHO05D004465 2.8e-55 219.9 267 42.3
Hma1.2p1_3282F.1_g334840 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 4.8e-55 219.2 307 37.8
AL1G61260 Arabidopsis lyrata HOM05D003434 ORTHO05D004465 1.1e-54 218.0 292 39.0
Nitab4.5_0000677g0140 Nicotiana tabacum HOM05D003434 ORTHO05D004465 1.1e-54 218.0 331 38.1
ClCG01G010880 Citrullus lanatus HOM05D003434 ORTHO05D004465 1.8e-54 217.2 257 43.6
PRCOL_00005895 Prasinoderma coloniale HOM05D003434 ORTHO05D004465 4.0e-54 216.1 243 44.9
ClCG03G016840 Citrullus lanatus HOM05D003434 ORTHO05D004465 9.0e-54 214.9 323 38.1
Phvul.001G137900 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 1.1e-51 208.0 241 44.4
Psat3g183280 Pisum sativum HOM05D003434 ORTHO05D004465 3.2e-51 206.5 244 43.9
BraA01t03909Z Brassica rapa HOM05D003434 ORTHO05D004465 4.2e-51 206.1 241 43.6
Ah.01g001850 Amaranthus hybridus HOM05D003434 ORTHO05D004465 5.1e-49 199.1 267 41.2
Hma1.2p1_0400F.1_g144660 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 2.5e-48 196.8 293 36.9
TAR624G0430 Trochodendron aralioides HOM05D003434 ORTHO05D004465 2.8e-47 193.4 167 51.5
Haze_26676 Corylus avellana HOM05D003434 ORTHO05D004465 6.3e-47 192.2 264 37.9
BcaC09g48510 Brassica carinata HOM05D003434 ORTHO05D004465 2.4e-46 190.3 222 43.2
Phvul.001G137800 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 1.5e-45 187.6 214 43.5
Phvul.001G138125 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 1.5e-45 187.6 214 43.5
SalBow6G7052 Salvia bowleyana HOM05D003434 ORTHO05D004465 1.0e-44 184.9 268 38.8
CBR_g29800 Chara braunii HOM05D003434 ORTHO05D004465 1.1e-43 181.4 275 38.2
Migut.H01924 Erythranthe guttata HOM05D003434 ORTHO05D004465 1.9e-43 180.6 290 36.2
SEGI_09483 Sequoiadendron giganteum HOM05D003434 ORTHO05D004465 6.7e-41 172.2 200 41.5
Sabra16G0264800 Salix brachista HOM05D003434 ORTHO05D004465 6.3e-39 165.6 191 41.9
Gohir.A04G028400 Gossypium hirsutum HOM05D003434 ORTHO05D004465 8.2e-39 165.2 265 35.1
Zm00001eb183430 Zea mays HOM05D003434 ORTHO05D004465 1.4e-38 164.5 253 36.4
CsaV3_1G039130 Cucumis sativus L. HOM05D003434 ORTHO05D004465 1.0e-36 158.3 193 41.5
CDE04G2432 Ceratophyllum demersum HOM05D003434 ORTHO05D004465 4.7e-34 149.4 257 35.8
Phvul.008G022900 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 4.4e-32 142.9 131 48.9
HPP92_020071 Vanilla planifolia HOM05D003434 ORTHO05D004465 1.3e-31 141.4 147 46.3
TPR.G685 Trifolium pratense HOM05D003434 ORTHO05D004465 1.1e-30 138.3 120 52.5
Hma1.2p1_0687F.1_g203600 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 1.8e-22 110.9 311 29.9
DCAR_019542 Daucus carota HOM05D003434 ORTHO05D004465 4.7e-18 96.3 86 50.0
TPR.G38897 Trifolium pratense HOM05D003434 ORTHO05D004465 8.0e-18 95.5 144 37.5
CDE04G2177 Ceratophyllum demersum HOM05D003434 ORTHO05D004465 4.0e-17 93.2 132 39.4
Phvul.008G023000 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 4.0e-17 93.2 134 40.3
HPP92_020079 Vanilla planifolia HOM05D003434 ORTHO05D004465 2.2e-15 87.4 138 34.8
CsaV3_2G014790 Cucumis sativus L. HOM05D003434 ORTHO05D004465 8.2e-15 85.5 112 44.6
CsaV3_7G022570 Cucumis sativus L. HOM05D003434 ORTHO05D004465 3.1e-14 83.6 112 43.8
CsaV3_5G020630 Cucumis sativus L. HOM05D003434 ORTHO05D004465 3.5e-13 80.1 74 44.6
SEGI_35123 Sequoiadendron giganteum HOM05D003434 ORTHO05D004465 2.7e-10 70.5 64 50.0
Hund31009 Selenicereus undatus HOM05D003434 ORTHO05D023136 5.7e-08 62.8 89 40.4
Hund24220 Selenicereus undatus HOM05D003434 ORTHO05D004465 1.7e-07 61.2 66 43.9
Hund24225 Selenicereus undatus HOM05D003434 ORTHO05D023136 6.3e-07 59.3 63 44.4
Hma1.2p1_1415F.1_g281950 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 8.3e-07 58.9 65 44.6
Hma1.2p1_3286F.1_g334890 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 1.4e-06 58.2 41 58.5
TPR.G10880 Trifolium pratense HOM05D003434 ORTHO05D004465 5.4e-06 56.2 57 45.6


User provided reference genes

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