Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021983 Carpinus fangiana HOM05D000045 ORTHO05D043805 9.5e-30 133.7 117 100.0
TWI38G1541 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.4e-17 93.2 118 61.9
Manes.09G001400 Manihot esculenta HOM05D000045 ORTHO05D000067 5.4e-17 91.3 118 63.6
QL04p062085 Quercus lobata HOM05D000045 ORTHO05D000067 2.3e-15 85.9 117 83.8
MELO3C032585.2 Cucumis melo HOM05D000045 ORTHO05D000067 3.9e-15 85.1 118 83.1
CiPaw.03G112700 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.6e-15 84.3 118 81.4
Sed0004030 Sechium edule HOM05D000045 ORTHO05D000067 8.6e-15 84.0 118 81.4
Atru.chr8.996 Acer truncatum HOM05D000045 ORTHO05D000067 5.6e-14 81.3 116 79.3
EL10Ac6g15346 Beta vulgaris HOM05D000045 ORTHO05D000067 5.6e-14 81.3 119 62.2
CiPaw.04G072900 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.6e-14 81.3 115 80.0
AUR62017848 Chenopodium quinoa HOM05D000045 ORTHO05D000067 5.6e-14 81.3 119 63.0
Cpa.g.sc8.288 Carica papaya HOM05D000045 ORTHO05D000067 1.1e-12 77.0 118 78.0
CsaV3_4G007320 Cucumis sativus L. HOM05D000045 ORTHO05D000067 1.1e-12 77.0 118 81.4
Potri.006G020700 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.8e-12 76.3 117 74.4
Potri.016G018300 Populus trichocarpa HOM05D000045 ORTHO05D000067 3.1e-12 75.5 117 72.6
RcHm_v2.0_Chr2g0153571 Rosa chinensis HOM05D000045 ORTHO05D000067 3.1e-12 75.5 118 79.7
FvH4_6g39513 Fragaria vesca HOM05D000045 ORTHO05D000067 4.0e-12 75.1 122 71.3
MD17G1129000 Malus domestica HOM05D000045 ORTHO05D000067 4.0e-12 75.1 118 78.0
Lj2C422T1 Lonicera japonica HOM05D000045 ORTHO05D000067 1.5e-11 73.2 118 75.4
Prupe.3G186200 Prunus persica HOM05D000045 ORTHO05D000067 1.5e-11 73.2 118 79.7
arahy.Tifrunner.gnm1.ann1.KBR22V Arachis hypogaea HOM05D000045 ORTHO05D000067 2.0e-11 72.8 119 51.3
arahy.Tifrunner.gnm1.ann1.QW5BDX Arachis hypogaea HOM05D000045 ORTHO05D000067 2.0e-11 72.8 119 51.3
GSVIVG01015826001 Vitis vinifera HOM05D000045 ORTHO05D043805 2.0e-11 72.8 118 74.6
Eucgr.A00908 Eucalyptus grandis HOM05D000045 ORTHO05D000067 2.6e-11 72.4 119 63.0
HanXRQChr16g0515281 Helianthus annuus HOM05D000045 ORTHO05D000067 3.4e-11 72.0 118 78.8
MD09G1139500 Malus domestica HOM05D000045 ORTHO05D000067 3.4e-11 72.0 118 76.3
CSS0038522 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.5e-11 70.9 118 75.4
Duzib068G0868 Durio zibethinus HOM05D000045 ORTHO05D000067 2.2e-10 69.3 117 55.6
Glyma.04G124300 Glycine max HOM05D000045 ORTHO05D000067 6.4e-10 67.8 118 51.7
Dinv11071 Davidia involucrata HOM05D000045 ORTHO05D000067 1.1e-09 67.0 118 76.3
Sc16g0004490 Simmondsia chinensis HOM05D000045 ORTHO05D000067 2.4e-09 65.9 120 60.8
TPR.G5129 Trifolium pratense HOM05D000045 ORTHO05D000067 3.2e-09 65.5 118 49.2
Peaxi162Scf00393g00052 Petunia axillaris HOM05D000045 ORTHO05D000067 4.1e-09 65.1 115 73.9
Ca_14176_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 5.4e-09 64.7 119 64.7
Glyma.06G314300 Glycine max HOM05D000045 ORTHO05D000067 5.4e-09 64.7 118 50.8
Gohir.A03G091400 Gossypium hirsutum HOM05D000045 ORTHO05D000067 5.4e-09 64.7 117 53.8
CAN.G182.23 Capsicum annuum HOM05D000045 ORTHO05D000067 7.1e-09 64.3 115 76.5
Gohir.D02G119800 Gossypium hirsutum HOM05D000045 ORTHO05D000067 7.1e-09 64.3 117 53.8
Nitab4.5_0002232g0050 Nicotiana tabacum HOM05D000045 ORTHO05D000067 7.1e-09 64.3 115 73.0
ECA233G4603 Erigeron canadensis HOM05D000045 ORTHO05D000067 9.2e-09 63.9 118 74.6
A01p32990 Brassica napus HOM05D000045 ORTHO05D000067 1.2e-08 63.5 115 42.6
Solyc07g043270.3 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.2e-08 63.5 115 72.2
Migut.M00094 Erythranthe guttata HOM05D000045 ORTHO05D000067 1.6e-08 63.2 128 62.5
Phvul.005G011700 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 1.6e-08 63.2 119 63.0
VMungo1080G1383 Vigna mungo HOM05D000045 ORTHO05D000067 1.6e-08 63.2 119 63.9
C01p42080 Brassica napus HOM05D000045 ORTHO05D000067 2.1e-08 62.8 115 44.3
BraA01t03418Z Brassica rapa HOM05D000045 ORTHO05D000067 2.1e-08 62.8 113 42.5
Thecc.03G063600 Theobroma cacao HOM05D000045 ORTHO05D000067 2.1e-08 62.8 117 56.4
THA.LOC104822281 Tarenaya hassleriana HOM05D000045 ORTHO05D000067 2.7e-08 62.4 114 72.8
Sopen07g022850 Solanum pennellii HOM05D000045 ORTHO05D000067 3.5e-08 62.0 115 71.3
COL.COLO4_20589 Corchorus olitorius HOM05D000045 ORTHO05D000067 4.6e-08 61.6 117 52.1
Lalb_Chr19g0132621 Lupinus albus HOM05D000045 ORTHO05D000067 4.6e-08 61.6 128 46.9
MSTRG.6600 Avicennia marina HOM05D000045 ORTHO05D000067 6.0e-08 61.2 117 59.0
Gorai.005G134200 Gossypium raimondii HOM05D000045 ORTHO05D000067 6.0e-08 61.2 144 45.8
Aa31LG8G8730 Aethionema arabicum HOM05D000045 ORTHO05D000067 7.8e-08 60.8 118 59.3
Lsat_1_v5_gn_8_33061 Lactuca sativa HOM05D000045 ORTHO05D000067 7.8e-08 60.8 118 72.9
AT3G22170 Arabidopsis thaliana HOM05D000045 ORTHO05D000067 1.0e-07 60.5 118 58.5
Carub.0003s2234 Capsella rubella HOM05D000045 ORTHO05D000067 1.0e-07 60.5 117 43.6
C05p41240 Brassica napus HOM05D000045 ORTHO05D000067 1.7e-07 59.7 116 68.1
BolC5t32866H Brassica oleracea HOM05D000045 ORTHO05D000067 1.7e-07 59.7 116 68.1
BolC1t04169H Brassica oleracea HOM05D000045 ORTHO05D000067 2.3e-07 59.3 115 34.8
PGR031G1614 Punica granatum HOM05D000045 ORTHO05D000067 2.3e-07 59.3 119 67.2
A05p26650 Brassica napus HOM05D000045 ORTHO05D000067 3.0e-07 58.9 116 66.4
BraA05t21541Z Brassica rapa HOM05D000045 ORTHO05D000067 3.0e-07 58.9 116 66.4
Rhsim04G0084400 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.0e-07 58.9 127 55.1
THA.LOC104808512 Tarenaya hassleriana HOM05D000045 ORTHO05D000067 3.0e-07 58.9 116 49.1
Thhalv10020053m.g Eutrema salsugineum HOM05D000045 ORTHO05D000067 3.9e-07 58.5 117 68.4
Sp3g19980 Schrenkiella parvula HOM05D000045 ORTHO05D000067 3.9e-07 58.5 117 69.2
AL3G36380 Arabidopsis lyrata HOM05D000045 ORTHO05D000067 6.6e-07 57.8 117 57.3
CARHR098060 Cardamine hirsuta HOM05D000045 ORTHO05D000067 6.6e-07 57.8 117 56.4
Lj3g0006959 Lotus japonicus HOM05D000045 ORTHO05D000067 6.6e-07 57.8 118 51.7
AUR62003534 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.5e-06 56.6 97 62.9
Ah.03g147610 Amaranthus hybridus HOM05D000045 ORTHO05D000067 4.3e-06 55.1 120 59.2
FvH4_6g39512 Fragaria vesca HOM05D000045 ORTHO05D000067 7.3e-06 54.3 112 34.8
RcHm_v2.0_Chr2g0153561 Rosa chinensis HOM05D000045 ORTHO05D000067 9.5e-06 53.9 114 34.2


User provided reference genes

Program Settings