Gene: Sopen07g022850

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g022850
  • Transcript Identifier Sopen07g022850.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 67446253-67453770 : negative

Gene Family Information

  • ID HOM05D000045
  • #Genes/#Species 4772/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g022850.1

Descriptions

  • Description A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. | far-red elongated hypocotyls 3 (FHY3) | CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain , Transcription factor, FAR1-related , Zinc finger, PMZ-type , Zinc finger, SWIM-type , Glycoside hydrolase, family 10 | BEST Arabidopsis thaliana protein match is: FRS (FAR1 Related Sequences) transcription factor family
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT3G22170
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT3G22170
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G22170
GO:1900056
ISO
PLAZA Integrative Orthologynegative regulation of leaf senescence AT3G22170
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT3G22170
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT3G22170
GO:0042753
ISO
PLAZA Integrative Orthologypositive regulation of circadian rhythm AT3G22170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G22170
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G22170
GO:0001228
ISO
PLAZA Integrative OrthologyDNA-binding transcription activator activity, RNA polymerase II-specific AT3G22170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G22170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004330 FAR1 DNA binding domain
IPR031052 FHY3/FAR1 family
IPR007527 Zinc finger, SWIM-type
IPR006564 Zinc finger, PMZ-type
IPR018289 MULE transposase domain
Mapman id Description
15.5.44 RNA biosynthesis.transcriptional regulation.transcription factor (FRS/FRF)
26.1.1.6 External stimuli response.light.red/far red light.transcriptional regulator (FRS)