Gene: Sopen07g022850
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g022850
- Transcript Identifier Sopen07g022850.1
- Gene Type Coding gene
- Location Spenn-ch07 : 67446253-67453770 : negative
Gene Family Information
- ID HOM05D000045
- #Genes/#Species 4772/90
- Phylogenetic origin
- ID ORTHO05D000067
- #Genes/#Species 2550/87
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen07g022850.1
Descriptions
- Description A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. | far-red elongated hypocotyls 3 (FHY3) | CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain , Transcription factor, FAR1-related , Zinc finger, PMZ-type , Zinc finger, SWIM-type , Glycoside hydrolase, family 10 | BEST Arabidopsis thaliana protein match is: FRS (FAR1 Related Sequences) transcription factor family
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009585 | ISO | PLAZA Integrative Orthology | red, far-red light phototransduction | AT3G22170 |
| GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT3G22170 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT3G22170 |
| GO:1900056 | ISO | PLAZA Integrative Orthology | negative regulation of leaf senescence | AT3G22170 |
| GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT3G22170 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT3G22170 |
| GO:0042753 | ISO | PLAZA Integrative Orthology | positive regulation of circadian rhythm | AT3G22170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G22170 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G22170 |
| GO:0001228 | ISO | PLAZA Integrative Orthology | DNA-binding transcription activator activity, RNA polymerase II-specific | AT3G22170 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G22170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |