Gene: Lsat_1_v5_gn_8_33061
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_8_33061
- Transcript Identifier Lsat_1_v5_gn_8_33061.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_8 : 42811756-42814848 : positive
Gene Family Information
- ID HOM05D000045
- #Genes/#Species 4772/90
- Phylogenetic origin
- ID ORTHO05D000067
- #Genes/#Species 2550/87
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_8_33061.v5
- pacid 38954528
Descriptions
- Description PTHR31669:SF26 - PROTEIN FAR-RED ELONGATED HYPOCOTYL 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009585 | ISO | PLAZA Integrative Orthology | red, far-red light phototransduction | AT3G22170 |
| GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT3G22170 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT3G22170 |
| GO:1900056 | ISO | PLAZA Integrative Orthology | negative regulation of leaf senescence | AT3G22170 |
| GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT3G22170 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT3G22170 |
| GO:0042753 | ISO | PLAZA Integrative Orthology | positive regulation of circadian rhythm | AT3G22170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G22170 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G22170 |
| GO:0001228 | ISO | PLAZA Integrative Orthology | DNA-binding transcription activator activity, RNA polymerase II-specific | AT3G22170 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G22170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |