Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 1.3e-213 746.1 384 100.0
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 3.0e-165 585.5 382 80.4
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 4.8e-163 578.2 381 80.3
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 4.0e-162 575.1 381 78.7
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 9.0e-162 573.9 356 83.4
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 1.5e-161 573.2 388 77.3
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 2.6e-161 572.4 377 80.1
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 7.6e-161 570.9 408 75.0
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 1.0e-160 570.5 347 85.0
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 1.7e-160 569.7 354 83.1
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.7e-160 569.7 359 81.1
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 2.2e-160 569.3 379 78.6
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 2.2e-160 569.3 368 79.6
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.9e-160 568.9 365 82.5
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 2.9e-160 568.9 382 78.0
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 3.8e-160 568.5 384 77.1
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 2.5e-159 565.8 354 82.5
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 1.2e-158 563.5 382 77.2
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.6e-158 563.1 359 80.2
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 2.7e-158 562.4 359 80.2
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 2.7e-158 562.4 357 80.7
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 2.7e-158 562.4 350 81.4
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 4.6e-158 561.6 384 75.8
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 4.6e-158 561.6 362 81.5
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 1.0e-157 560.5 322 87.6
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 1.0e-157 560.5 384 77.3
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 1.8e-157 559.7 358 80.4
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 1.8e-157 559.7 382 77.2
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.8e-157 559.7 365 81.1
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 2.3e-157 559.3 381 78.5
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 2.3e-157 559.3 354 80.8
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 2.3e-157 559.3 359 80.5
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 3.0e-157 558.9 371 79.0
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 3.0e-157 558.9 376 79.0
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 3.0e-157 558.9 354 81.1
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 3.0e-157 558.9 371 79.8
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 5.1e-157 558.1 365 79.5
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 6.7e-157 557.8 375 78.4
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 6.7e-157 557.8 361 80.1
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 6.7e-157 557.8 371 79.0
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 6.7e-157 557.8 396 74.5
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 6.7e-157 557.8 327 85.0
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 8.7e-157 557.4 358 81.3
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 1.1e-156 557.0 361 79.5
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 1.5e-156 556.6 362 79.8
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.5e-156 556.6 371 77.4
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.5e-156 556.6 371 77.4
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 1.5e-156 556.6 356 82.0
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 3.3e-156 555.4 366 80.9
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 3.3e-156 555.4 322 87.0
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 3.3e-156 555.4 357 80.4
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 5.7e-156 554.7 389 75.6
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 5.7e-156 554.7 360 80.0
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 5.7e-156 554.7 363 79.6
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 9.6e-156 553.9 359 80.8
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 1.3e-155 553.5 371 78.4
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 1.6e-155 553.1 336 83.6
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 2.8e-155 552.4 372 76.3
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 2.8e-155 552.4 325 86.8
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 3.7e-155 552.0 350 82.0
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 6.3e-155 551.2 357 81.0
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 8.2e-155 550.8 361 79.2
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 1.1e-154 550.4 384 76.0
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 1.1e-154 550.4 372 76.6
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 1.8e-154 549.7 348 81.3
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 2.4e-154 549.3 326 85.6
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 2.4e-154 549.3 363 78.8
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.3e-154 548.1 354 81.1
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 6.9e-154 547.7 333 81.7
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 6.9e-154 547.7 341 82.1
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 6.9e-154 547.7 365 78.4
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 9.0e-154 547.4 357 79.0
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 9.0e-154 547.4 355 80.3
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 1.2e-153 547.0 338 83.7
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 2.0e-153 546.2 383 75.5
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 2.6e-153 545.8 354 79.7
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 1.3e-152 543.5 343 80.2
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 1.7e-152 543.1 378 77.0
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 2.9e-152 542.3 382 74.1
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.9e-152 542.3 353 79.6
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 5.0e-152 541.6 368 78.0
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 1.4e-151 540.0 339 81.1
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.4e-151 540.0 339 81.1
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 1.9e-151 539.7 332 80.7
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.5e-151 539.3 358 78.8
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.2e-151 538.9 358 78.5
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 5.5e-151 538.1 382 74.9
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 5.5e-151 538.1 321 84.7
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 1.2e-150 537.0 387 74.2
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 1.2e-150 537.0 387 74.2
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 1.6e-150 536.6 386 72.0
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 2.1e-150 536.2 319 85.9
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 2.7e-150 535.8 383 74.2
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 2.7e-150 535.8 361 77.3
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 2.7e-150 535.8 352 77.3
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 2.7e-150 535.8 357 76.5
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 3.5e-150 535.4 376 77.1
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 3.5e-150 535.4 386 73.3
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 6.1e-150 534.6 386 72.0
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 1.0e-149 533.9 387 73.6
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 3.0e-149 532.3 386 73.1
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 3.0e-149 532.3 372 75.5
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 3.9e-149 531.9 387 73.6
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 3.9e-149 531.9 372 74.5
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 5.1e-149 531.6 386 72.0
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 6.7e-149 531.2 336 81.0
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 8.7e-149 530.8 386 72.8
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 1.1e-148 530.4 354 78.5
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 1.1e-148 530.4 357 77.6
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 1.1e-148 530.4 354 78.5
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 1.1e-148 530.4 389 73.0
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 2.5e-148 529.3 361 76.5
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 4.3e-148 528.5 375 74.7
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 4.3e-148 528.5 389 72.8
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 5.7e-148 528.1 360 76.4
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 9.7e-148 527.3 357 77.3
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 9.7e-148 527.3 357 77.3
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 9.7e-148 527.3 389 73.3
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 1.3e-147 526.9 357 77.0
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 2.2e-147 526.2 461 63.3
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 1.8e-146 523.1 342 78.4
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 3.1e-146 522.3 338 79.3
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 2.6e-145 519.2 421 67.0
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 2.6e-145 519.2 473 63.8
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.4e-145 518.8 339 79.1
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.4e-145 518.8 339 79.1
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 1.0e-144 517.3 379 70.2
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.3e-144 516.9 382 73.0
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 2.9e-144 515.8 379 70.2
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 8.5e-144 514.2 327 79.5
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.9e-143 513.1 287 89.5
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 5.5e-143 511.5 287 87.8
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 3.0e-141 505.8 355 74.4
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 3.4e-137 492.3 387 69.5
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 1.0e-136 490.7 350 74.6
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 3.8e-136 488.8 332 75.0
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 7.2e-135 484.6 333 73.6
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.3e-133 479.6 328 73.8
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.3e-133 479.6 314 76.4
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 3.9e-133 478.8 356 69.7
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 1.1e-132 477.2 389 67.6
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 1.7e-131 473.4 339 71.1
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 2.8e-131 472.6 322 75.5
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.8e-130 469.9 329 76.3
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 2.6e-129 466.1 314 72.6
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 5.9e-129 464.9 301 76.7
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 7.7e-129 464.5 299 78.3
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 1.8e-114 416.8 300 70.7
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 2.2e-112 409.8 263 83.3
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 3.6e-110 402.5 250 82.0
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 6.8e-109 398.3 312 65.1
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 1.6e-105 387.1 264 78.8
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 7.5e-100 368.2 290 64.5
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 7.5e-92 341.7 232 75.9
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 1.1e-79 301.2 270 62.6
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 1.5e-71 274.2 171 83.0
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 4.3e-71 272.7 191 74.9
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 2.8e-70 270.0 309 51.1
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 8.9e-69 265.0 385 46.0
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 2.3e-48 197.2 112 84.8
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 4.3e-47 193.0 113 85.8
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 5.7e-39 166.0 211 53.6
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 2.1e-38 164.1 194 54.1
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 2.1e-38 164.1 194 54.1
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 2.5e-34 150.6 284 34.9
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 2.1e-33 147.5 104 70.2
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 7.9e-33 145.6 102 71.6
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 7.9e-33 145.6 102 71.6
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 5.1e-32 142.9 102 70.6
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 1.1e-31 141.7 98 71.4
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 4.3e-31 139.8 106 67.0
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 1.4e-29 134.8 107 62.6
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 2.0e-28 131.0 106 62.3
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 1.0e-19 102.1 64 75.0
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 4.2e-18 96.7 67 76.1
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 4.7e-17 93.2 61 83.6
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.4e-16 91.7 49 91.8
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 1.5e-07 61.6 38 73.7
BcaC01g02956 Brassica carinata HOM05D003055 ORTHO05D013026 1.7e-06 58.2 38 71.1


User provided reference genes

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