Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g15190 Coffea canephora HOM05D003878 ORTHO05D003857 2.4e-66 255.4 130 100.0
Dinv10653 Davidia involucrata HOM05D003878 ORTHO05D003857 7.5e-28 127.5 123 50.4
Oeu024449.1 Olea europaea HOM05D003878 ORTHO05D003857 2.1e-25 119.4 94 61.7
MSTRG.9618 Avicennia marina HOM05D003878 ORTHO05D003857 1.1e-21 107.1 109 50.5
Duzib068G0503 Durio zibethinus HOM05D003878 ORTHO05D003857 1.4e-21 106.7 94 54.3
Actinidia19020 Actinidia chinensis HOM05D003878 ORTHO05D003857 1.5e-20 103.2 102 51.0
Actinidia35011 Actinidia chinensis HOM05D003878 ORTHO05D003857 2.0e-20 102.8 99 52.5
HanXRQChr02g0043181 Helianthus annuus HOM05D003878 ORTHO05D003857 3.4e-20 102.1 98 51.0
TAR369G0188 Trochodendron aralioides HOM05D003878 ORTHO05D003857 5.8e-20 101.3 93 50.5
Manes.14G081500 Manihot esculenta HOM05D003878 ORTHO05D003857 9.9e-20 100.5 104 48.1
Hma1.2p1_0322F.1_g125070 Hydrangea macrophylla HOM05D003878 ORTHO05D003857 1.7e-19 99.8 106 48.1
TAR625G0726 Trochodendron aralioides HOM05D003878 ORTHO05D003857 2.2e-19 99.4 93 49.5
Duzib205G1832 Durio zibethinus HOM05D003878 ORTHO05D003857 2.9e-19 99.0 100 49.0
Solyc06g069690.4 Solanum lycopersicum HOM05D003878 ORTHO05D003857 2.9e-19 99.0 84 53.6
CAN.G479.63 Capsicum annuum HOM05D003878 ORTHO05D003857 3.8e-19 98.6 104 47.1
Gohir.A03G067700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 3.8e-19 98.6 92 51.1
Gohir.D03G094200 Gossypium hirsutum HOM05D003878 ORTHO05D003857 3.8e-19 98.6 92 51.1
Gorai.003G098300 Gossypium raimondii HOM05D003878 ORTHO05D003857 3.8e-19 98.6 92 51.1
Aa31LG11G2040 Aethionema arabicum HOM05D003878 ORTHO05D003857 4.9e-19 98.2 84 56.0
Nn5g26927 Nelumbo nucifera HOM05D003878 ORTHO05D003857 4.9e-19 98.2 106 46.2
PSO478G1572 Papaver somniferum HOM05D003878 ORTHO05D003857 4.9e-19 98.2 90 50.0
Sabra15G0086900 Salix brachista HOM05D003878 ORTHO05D003857 4.9e-19 98.2 106 49.1
Ah.02g113730 Amaranthus hybridus HOM05D003878 ORTHO05D003857 6.4e-19 97.8 93 50.5
PSO017G0340 Papaver somniferum HOM05D003878 ORTHO05D003857 6.4e-19 97.8 90 50.0
Sopen06g026990 Solanum pennellii HOM05D003878 ORTHO05D003857 6.4e-19 97.8 84 52.4
TAR629G1644 Trochodendron aralioides HOM05D003878 ORTHO05D003857 6.4e-19 97.8 94 52.1
Nn2g10380 Nelumbo nucifera HOM05D003878 ORTHO05D003857 8.4e-19 97.4 98 46.9
Hund09823 Selenicereus undatus HOM05D003878 ORTHO05D003857 8.4e-19 97.4 94 51.1
Dinv10655 Davidia involucrata HOM05D003878 ORTHO05D003857 1.1e-18 97.1 84 53.6
CARHR275140 Cardamine hirsuta HOM05D003878 ORTHO05D003857 1.4e-18 96.7 84 56.0
Migut.D01765 Erythranthe guttata HOM05D003878 ORTHO05D003857 1.4e-18 96.7 109 48.6
Potri.015G061900 Populus trichocarpa HOM05D003878 ORTHO05D003857 1.4e-18 96.7 94 48.9
PGSC0003DMG400033048 Solanum tuberosum HOM05D003878 ORTHO05D003857 1.4e-18 96.7 84 52.4
SGA_v2.0_scaffold25G10935 Striga asiatica HOM05D001764 ORTHO05D001946 1.4e-18 96.7 92 50.0
Aqoxy3G03485 Aquilegia oxysepala HOM05D003878 ORTHO05D003857 2.4e-18 95.9 102 46.1
Rhsim12G0154100 Rhododendron simsii HOM05D003878 ORTHO05D003857 2.4e-18 95.9 84 53.6
THA.LOC104801462 Tarenaya hassleriana HOM05D003878 ORTHO05D003857 3.2e-18 95.5 84 54.8
Thecc.03G093700 Theobroma cacao HOM05D003878 ORTHO05D003857 3.2e-18 95.5 92 51.1
DCAR_016576 Daucus carota HOM05D003878 ORTHO05D003857 4.2e-18 95.1 109 46.8
vmacro16524 Vaccinium macrocarpon HOM05D003878 ORTHO05D003857 4.2e-18 95.1 108 48.1
MSTRG.4440 Avicennia marina HOM05D003878 ORTHO05D003857 5.4e-18 94.7 101 48.5
BcaB04g19909 Brassica carinata HOM05D003878 ORTHO05D003857 7.1e-18 94.4 84 54.8
BraA09t36379Z Brassica rapa HOM05D003878 ORTHO05D003857 7.1e-18 94.4 84 54.8
Dinv38743 Davidia involucrata HOM05D003878 ORTHO05D003857 7.1e-18 94.4 114 45.6
MBI05_g41786_MAGBIO Magnolia biondii HOM05D003878 ORTHO05D003857 7.1e-18 94.4 94 45.7
AL8G38050 Arabidopsis lyrata HOM05D003878 ORTHO05D003857 9.2e-18 94.0 84 53.6
A03p46980 Brassica napus HOM05D003878 ORTHO05D003857 9.2e-18 94.0 84 54.8
C07p45020 Brassica napus HOM05D003878 ORTHO05D003857 9.2e-18 94.0 84 54.8
BolC7t45025H Brassica oleracea HOM05D003878 ORTHO05D003857 9.2e-18 94.0 84 54.8
BraA03t13822Z Brassica rapa HOM05D003878 ORTHO05D003857 9.2e-18 94.0 84 54.8
Carub.0008s2205 Capsella rubella HOM05D003878 ORTHO05D003857 9.2e-18 94.0 84 53.6
Cc04_g14990 Coffea canephora HOM05D003878 ORTHO05D003857 9.2e-18 94.0 92 47.8
Lj9C466G6 Lonicera japonica HOM05D003878 ORTHO05D003857 9.2e-18 94.0 117 45.3
Sp2g24590 Schrenkiella parvula HOM05D003878 ORTHO05D003857 9.2e-18 94.0 84 53.6
Thhalv10003924m.g Eutrema salsugineum HOM05D003878 ORTHO05D003857 1.2e-17 93.6 84 53.6
Lalb_Chr07g0178171 Lupinus albus HOM05D003878 ORTHO05D003857 1.2e-17 93.6 103 45.6
Manes.06G089800 Manihot esculenta HOM05D003878 ORTHO05D003857 1.2e-17 93.6 105 45.7
Atru.chr9.336 Acer truncatum HOM05D003878 ORTHO05D003857 1.6e-17 93.2 105 47.6
ATR0680G414 Amborella trichopoda HOM05D003878 ORTHO05D003857 1.6e-17 93.2 93 46.2
Lsat_1_v5_gn_1_14320 Lactuca sativa HOM05D003878 ORTHO05D003857 1.6e-17 93.2 98 46.9
AT5G61380 Arabidopsis thaliana HOM05D003878 ORTHO05D003857 2.1e-17 92.8 84 53.6
C09p08170 Brassica napus HOM05D003878 ORTHO05D003857 2.1e-17 92.8 84 54.8
BolC9t53729H Brassica oleracea HOM05D003878 ORTHO05D003857 2.1e-17 92.8 84 54.8
Migut.I00209 Erythranthe guttata HOM05D003878 ORTHO05D003857 2.1e-17 92.8 84 51.2
PSO063G5546 Papaver somniferum HOM05D003878 ORTHO05D003857 2.1e-17 92.8 84 51.2
PSO198G0128 Papaver somniferum HOM05D003878 ORTHO05D003857 2.1e-17 92.8 84 51.2
Sed0008795 Sechium edule HOM05D003878 ORTHO05D003857 2.1e-17 92.8 109 45.0
Oeu006383.1 Olea europaea HOM05D003878 ORTHO05D003857 2.7e-17 92.4 101 47.5
SalBow7G4352 Salvia bowleyana HOM05D003878 ORTHO05D003857 2.7e-17 92.4 102 47.1
GSVIVG01007965001 Vitis vinifera HOM05D003878 ORTHO05D003857 2.7e-17 92.4 105 47.6
Actinidia37611 Actinidia chinensis HOM05D003878 ORTHO05D003857 4.6e-17 91.7 101 44.6
Cpa.g.sc13.294 Carica papaya HOM05D003878 ORTHO05D003857 4.6e-17 91.7 86 51.2
AUR62021636 Chenopodium quinoa HOM05D003878 ORTHO05D003857 4.6e-17 91.7 87 50.6
Lalb_Chr08g0235491 Lupinus albus HOM05D003878 ORTHO05D003857 4.6e-17 91.7 95 46.3
TAR623G0526 Trochodendron aralioides HOM05D003878 ORTHO05D003857 4.6e-17 91.7 99 45.5
BcaC04g23454 Brassica carinata HOM05D003878 ORTHO05D003857 6.0e-17 91.3 84 53.6
CSS0032055 Camellia sinensis var. sinensis HOM05D003878 ORTHO05D003857 6.0e-17 91.3 112 46.4
Ca_21808_v3 Cicer arietinum L. HOM05D003878 ORTHO05D003857 6.0e-17 91.3 100 45.0
Oeu047002.2 Olea europaea HOM05D003878 ORTHO05D003857 6.0e-17 91.3 101 46.5
unitig_0.g775 Utricularia gibba HOM05D003878 ORTHO05D003857 6.0e-17 91.3 84 50.0
ClCG04G012090 Citrullus lanatus HOM05D003878 ORTHO05D003857 1.0e-16 90.5 104 45.2
COL.COLO4_36941 Corchorus olitorius HOM05D003878 ORTHO05D003857 1.0e-16 90.5 94 47.9
MELO3C001999.2 Cucumis melo HOM05D003878 ORTHO05D003857 1.0e-16 90.5 104 45.2
CsaV3_1G005680 Cucumis sativus L. HOM05D003878 ORTHO05D003857 1.0e-16 90.5 104 45.2
PGSC0003DMG400019518 Solanum tuberosum HOM05D003878 ORTHO05D003857 1.0e-16 90.5 103 45.6
Lsat_1_v5_gn_5_21481 Lactuca sativa HOM05D003878 ORTHO05D003857 1.7e-16 89.7 127 42.5
Lj5A108G51 Lonicera japonica HOM05D003878 ORTHO05D003857 1.7e-16 89.7 130 40.0
Solyc03g115770.3 Solanum lycopersicum HOM05D003878 ORTHO05D003857 1.7e-16 89.7 109 44.0
Sopen03g034750 Solanum pennellii HOM05D003878 ORTHO05D003857 1.7e-16 89.7 109 44.0
CANSAT80G1069 Cannabis sativa HOM05D003878 ORTHO05D003857 3.9e-16 88.6 109 42.2
Medtr4g108880 Medicago truncatula HOM05D003878 ORTHO05D003857 3.9e-16 88.6 109 44.0
Psat4g049800 Pisum sativum HOM05D003878 ORTHO05D003857 3.9e-16 88.6 101 44.6
PGR062G0001 Punica granatum HOM05D003878 ORTHO05D003857 3.9e-16 88.6 84 50.0
PGR083G0168 Punica granatum HOM05D003878 ORTHO05D003857 3.9e-16 88.6 84 50.0
VMungo1309G1477 Vigna mungo HOM05D003878 ORTHO05D003857 3.9e-16 88.6 110 41.8
Glyma.04G166300 Glycine max HOM05D003878 ORTHO05D003857 5.1e-16 88.2 96 45.8
Zm00001eb247330 Zea mays HOM05D003878 ORTHO05D003857 5.1e-16 88.2 98 49.0
ECA247G3052 Erigeron canadensis HOM05D003878 ORTHO05D003857 6.6e-16 87.8 84 50.0
MD06G1197300 Malus domestica HOM05D003878 ORTHO05D003857 8.7e-16 87.4 84 48.8
TPR.G681 Trifolium pratense HOM05D003878 ORTHO05D003857 8.7e-16 87.4 100 45.0
CDE09G1270 Ceratophyllum demersum HOM05D003878 ORTHO05D003857 1.1e-15 87.0 91 45.1
Glyma.06G196200 Glycine max HOM05D003878 ORTHO05D003857 1.1e-15 87.0 102 45.1
Os02g0618200 Oryza sativa ssp. japonica HOM05D003878 ORTHO05D003857 1.1e-15 87.0 102 47.1
FvH4_5g14560 Fragaria vesca HOM05D003878 ORTHO05D003857 1.5e-15 86.7 109 43.1
RcHm_v2.0_Chr7g0182001 Rosa chinensis HOM05D003878 ORTHO05D003857 1.5e-15 86.7 94 45.7
CiPaw.11G047100 Carya illinoinensis HOM05D003878 ORTHO05D003857 1.9e-15 86.3 105 45.7
CDE02G0803 Ceratophyllum demersum HOM05D003878 ORTHO05D003857 1.9e-15 86.3 91 45.1
Ciclev10019534m.g Citrus clementina HOM05D003878 ORTHO05D003857 1.9e-15 86.3 105 45.7
MD14G1204700 Malus domestica HOM05D003878 ORTHO05D003857 4.3e-15 85.1 94 45.7
Nitab4.5_0010874g0010 Nicotiana tabacum HOM05D003878 ORTHO05D003857 4.3e-15 85.1 115 40.9
FAN13G2746 Fragaria x ananassa HOM05D003878 ORTHO05D003857 5.6e-15 84.7 92 45.7
FAN18G1413 Fragaria x ananassa HOM05D003878 ORTHO05D003857 5.6e-15 84.7 92 45.7
Lj4g0002884 Lotus japonicus HOM05D003878 ORTHO05D003857 5.6e-15 84.7 105 42.9
QL10p017642 Quercus lobata HOM05D003878 ORTHO05D003857 5.6e-15 84.7 115 40.9
Prupe.5G198000 Prunus persica HOM05D003878 ORTHO05D003857 7.3e-15 84.3 100 45.0
QL10p017674 Quercus lobata HOM05D003878 ORTHO05D003857 7.3e-15 84.3 84 47.6
Migut.D01764 Erythranthe guttata HOM05D003878 ORTHO05D003857 9.6e-15 84.0 84 48.8
HanXRQChr08g0236661 Helianthus annuus HOM05D003878 ORTHO05D003857 9.6e-15 84.0 94 46.8
TWI60G1095 Tripterygium wilfordii HOM05D003878 ORTHO05D003857 9.6e-15 84.0 84 50.0
Phvul.009G185500 Phaseolus vulgaris HOM05D003878 ORTHO05D003857 1.3e-14 83.6 110 40.9
TPR.G11840 Trifolium pratense HOM05D003878 ORTHO05D003857 1.3e-14 83.6 109 42.2
VMungo1215G0660 Vigna mungo HOM05D003878 ORTHO05D003857 1.3e-14 83.6 95 44.2
arahy.Tifrunner.gnm1.ann1.2F1UPX Arachis hypogaea HOM05D003878 ORTHO05D003857 1.6e-14 83.2 106 41.5
arahy.Tifrunner.gnm1.ann1.D90B1M Arachis hypogaea HOM05D003878 ORTHO05D003857 1.6e-14 83.2 106 41.5
GSVIVG01007970001 Vitis vinifera HOM05D003878 ORTHO05D003857 1.6e-14 83.2 125 39.2
FAN08G1337 Fragaria x ananassa HOM05D003878 ORTHO05D003857 2.1e-14 82.8 92 44.6
Haze_07295 Corylus avellana HOM05D001764 ORTHO05D003857 2.8e-14 82.4 95 44.2
Prupe.5G197900 Prunus persica HOM05D003878 ORTHO05D003857 2.8e-14 82.4 98 44.9
TWI15G0625 Tripterygium wilfordii HOM05D003878 ORTHO05D003857 2.8e-14 82.4 106 42.5
Cfa018911 Carpinus fangiana HOM05D003878 ORTHO05D003857 3.6e-14 82.0 104 42.3
RcHm_v2.0_Chr7g0181991 Rosa chinensis HOM05D003878 ORTHO05D003857 3.6e-14 82.0 93 44.1
GSVIVG01007966001 Vitis vinifera HOM05D003878 ORTHO05D003857 3.6e-14 82.0 114 38.6
Sed0015977 Sechium edule HOM05D003878 ORTHO05D003857 4.8e-14 81.6 104 40.4
Glyma.17G102200 Glycine max HOM05D003878 ORTHO05D003857 6.2e-14 81.3 105 43.8
Nitab4.5_0005900g0090 Nicotiana tabacum HOM05D003878 ORTHO05D003857 6.2e-14 81.3 138 35.5
Ah.11g048230 Amaranthus hybridus HOM05D003878 ORTHO05D003857 8.1e-14 80.9 122 37.7
CAN.G587.10 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-14 80.9 112 37.5
Ca_14691_v3 Cicer arietinum L. HOM05D003878 ORTHO05D003857 8.1e-14 80.9 108 39.8
Ca_30947_v3 Cicer arietinum L. HOM05D003878 ORTHO05D003857 8.1e-14 80.9 108 39.8
Nitab4.5_0001211g0280 Nicotiana tabacum HOM05D003878 ORTHO05D003857 1.1e-13 80.5 136 36.0
Psat5g199360 Pisum sativum HOM05D003878 ORTHO05D003857 9.0e-13 77.4 84 42.9
EL10Ac5g11059 Beta vulgaris HOM05D003878 ORTHO05D003857 1.2e-12 77.0 144 33.3
Medtr3g037390 Medicago truncatula HOM05D003878 ORTHO05D003857 1.2e-12 77.0 103 39.8
FAN18G2514 Fragaria x ananassa HOM05D003878 ORTHO05D003857 1.7e-11 73.2 87 41.4
FvH4_5g14580 Fragaria vesca HOM05D003878 ORTHO05D003857 2.9e-11 72.4 96 40.6
CSS0027901 Camellia sinensis var. sinensis HOM05D003878 ORTHO05D003857 4.9e-11 71.6 67 49.3
HPP92_009069 Vanilla planifolia HOM05D003878 ORTHO05D003857 6.4e-11 71.2 94 35.1
SMO358G0608 Selaginella moellendorffii HOM05D003878 ORTHO05D003857 5.4e-10 68.2 84 35.7
unitig_60.g25802 Utricularia gibba HOM05D003878 ORTHO05D003857 7.1e-10 67.8 107 39.3
AUR62008459 Chenopodium quinoa HOM05D003878 ORTHO05D003857 1.6e-09 66.6 56 53.6
FAN13G3320 Fragaria x ananassa HOM05D001764 ORTHO05D003857 2.3e-08 62.8 92 40.2
Gohir.D07G083200 Gossypium hirsutum HOM05D003878 ORTHO05D003857 5.1e-08 61.6 63 47.6
Gohir.D11G114700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 4.3e-07 58.5 63 46.0
Gorai.005G145700 Gossypium raimondii HOM05D003878 ORTHO05D003857 9.6e-07 57.4 60 46.7
Gorai.007G317900 Gossypium raimondii HOM05D003878 ORTHO05D003857 2.8e-06 55.8 60 46.7
Gohir.D11G294700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 3.6e-06 55.5 60 46.7
Gohir.D13G087700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 6.2e-06 54.7 55 47.3


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