Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 2.0e-275 951.8 472 100.0
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 6.4e-194 681.0 473 71.0
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 4.6e-192 674.9 488 69.5
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.0e-187 659.4 472 69.5
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 3.4e-187 658.7 476 69.5
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 4.5e-187 658.3 474 69.8
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 5.8e-187 657.9 471 69.9
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 3.8e-186 655.2 471 69.0
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 8.4e-186 654.1 471 68.6
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.9e-185 652.9 471 68.6
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 3.2e-185 652.1 468 68.8
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 7.1e-185 651.0 474 68.6
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 9.3e-185 650.6 471 68.4
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.2e-184 650.2 471 67.3
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 4.6e-184 648.3 471 69.0
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 6.0e-184 647.9 473 68.3
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 1.8e-183 646.4 474 67.3
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 1.9e-182 642.9 473 68.5
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 2.5e-182 642.5 477 68.1
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 3.3e-182 642.1 473 68.3
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 5.6e-182 641.3 476 67.0
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 7.4e-182 641.0 474 67.3
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 9.6e-182 640.6 475 67.8
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 8.2e-181 637.5 481 66.1
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 2.4e-180 636.0 476 64.7
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 9.0e-180 634.0 475 66.1
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.3e-178 630.2 472 66.3
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 1.3e-178 630.2 476 65.8
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 4.9e-178 628.2 474 67.1
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 1.1e-177 627.1 480 64.2
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 1.1e-177 627.1 476 65.1
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 4.2e-177 625.2 476 65.1
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 7.1e-177 624.4 476 66.2
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 2.1e-176 622.9 480 64.0
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 2.1e-176 622.9 472 65.7
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 6.0e-176 621.3 476 64.3
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 8.7e-175 617.5 472 64.6
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.9e-174 616.3 472 64.8
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 1.9e-174 616.3 472 64.8
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 9.7e-174 614.0 484 64.7
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 4.8e-173 611.7 476 63.4
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 2.4e-172 609.4 468 63.7
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 6.9e-172 607.8 471 63.7
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 1.2e-171 607.1 475 63.4
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 1.5e-171 606.7 468 64.1
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 2.6e-171 605.9 482 63.5
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 3.4e-171 605.5 472 64.0
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 4.5e-171 605.1 482 63.3
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 1.3e-170 603.6 484 62.6
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 2.2e-170 602.8 472 63.3
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 3.8e-170 602.1 484 62.6
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 6.5e-170 601.3 474 63.5
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 1.1e-169 600.5 479 62.4
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 1.4e-169 600.1 482 62.9
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 2.5e-169 599.4 472 64.4
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 3.2e-169 599.0 482 63.3
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 4.2e-169 598.6 476 63.4
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 9.3e-169 597.4 475 62.9
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.2e-168 597.0 480 63.1
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 2.7e-168 595.9 472 62.9
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 3.6e-168 595.5 482 62.7
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 1.4e-167 593.6 471 62.8
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.8e-167 593.2 484 61.8
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 1.1e-166 590.5 484 62.2
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 1.1e-166 590.5 478 62.1
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 1.5e-166 590.1 484 62.2
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 1.5e-166 590.1 478 62.1
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 1.9e-166 589.7 443 64.8
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 3.3e-166 589.0 471 63.1
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.8e-164 583.2 493 62.9
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 6.9e-164 581.3 477 61.8
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 2.0e-163 579.7 472 62.9
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 1.0e-162 577.4 450 63.8
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 7.2e-161 571.2 481 61.5
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 1.0e-159 567.4 437 62.7
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.1e-158 563.9 469 61.8
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.5e-158 563.5 475 61.3
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 1.5e-155 553.5 490 58.8
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 5.0e-154 548.5 473 60.3
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 2.7e-152 542.7 420 61.4
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 1.8e-151 540.0 462 58.9
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 7.7e-147 524.6 385 66.0
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 2.8e-141 506.1 316 77.5
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 9.1e-140 501.1 372 64.8
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 7.0e-132 474.9 341 66.9
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.2e-131 474.2 479 49.3
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 4.2e-129 465.7 379 62.3
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 1.0e-122 444.5 447 49.2
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 9.5e-121 438.0 318 66.0
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 2.3e-114 416.8 487 43.9
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 1.0e-106 391.3 427 47.3
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 6.2e-96 355.5 380 44.7
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.4e-95 353.6 252 68.3
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 2.2e-93 347.1 430 43.5
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 3.8e-93 346.3 394 44.4
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 2.7e-91 340.1 269 65.1
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 3.0e-90 336.7 362 48.1
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 6.6e-90 335.5 276 63.0
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 1.2e-88 331.3 258 64.0
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 3.6e-88 329.7 396 41.4
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 3.1e-87 326.6 296 56.4
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.4e-84 317.0 316 54.1
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.3e-82 311.2 241 61.4
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 3.6e-80 303.1 446 40.8
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.8e-71 274.2 246 58.5
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 9.9e-70 268.5 207 60.9
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 4.9e-69 266.2 202 68.8
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 8.7e-58 228.8 236 53.4
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 8.5e-53 212.2 237 48.9
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 1.4e-50 204.9 118 80.5
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 2.2e-48 197.6 118 79.7
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 5.5e-44 183.0 187 53.5
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 7.4e-41 172.6 116 76.7
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 1.2e-27 128.6 98 63.3
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 2.7e-27 127.5 108 61.1
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 6.8e-26 122.9 115 52.2
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 4.4e-09 67.0 202 30.7
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 9.8e-09 65.9 202 30.7
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 2.2e-08 64.7 44 70.5
Actinidia26749 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.2e-06 58.9 90 44.4


User provided reference genes

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