Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g20230 Coffea canephora HOM05D000915 ORTHO05D154656 6.6e-114 414.1 213 100.0
Dinv11299 Davidia involucrata HOM05D000915 ORTHO05D001662 8.3e-40 167.9 185 57.3
Dinv32994 Davidia involucrata HOM05D000915 ORTHO05D001662 2.7e-35 152.9 184 55.4
Rhsim01G0280000 Rhododendron simsii HOM05D000915 ORTHO05D001662 4.1e-31 139.0 187 51.9
vmacro14963 Vaccinium macrocarpon HOM05D000915 ORTHO05D001662 7.0e-31 138.3 189 48.7
Lsat_1_v5_gn_5_188780 Lactuca sativa HOM05D000915 ORTHO05D001662 4.5e-30 135.6 185 48.6
PGSC0003DMG401024031 Solanum tuberosum HOM05D000915 ORTHO05D001662 1.3e-29 134.0 179 50.3
HanXRQChr01g0002771 Helianthus annuus HOM05D000915 ORTHO05D001662 1.7e-29 133.7 185 49.2
COL.COLO4_08029 Corchorus olitorius HOM05D000915 ORTHO05D001662 2.9e-29 132.9 186 49.5
Solyc06g084480.3 Solanum lycopersicum HOM05D000915 ORTHO05D001662 1.5e-28 130.6 180 49.4
Sopen06g035870 Solanum pennellii HOM05D000915 ORTHO05D001662 1.5e-28 130.6 180 49.4
ECA248G1218 Erigeron canadensis HOM05D000915 ORTHO05D001662 2.1e-27 126.7 186 46.8
SalBow6G1588 Salvia bowleyana HOM05D000915 ORTHO05D001662 2.1e-27 126.7 183 47.5
CiPaw.07G100100 Carya illinoinensis HOM05D000915 ORTHO05D001662 6.1e-27 125.2 184 49.5
Cfa006035 Carpinus fangiana HOM05D000915 ORTHO05D001662 1.8e-26 123.6 184 48.4
TAR633G2047 Trochodendron aralioides HOM05D000915 ORTHO05D001662 1.8e-26 123.6 186 50.5
Manes.01G213700 Manihot esculenta HOM05D000915 ORTHO05D001662 2.0e-25 120.2 184 47.8
Thecc.01G290500 Theobroma cacao HOM05D000915 ORTHO05D001662 2.0e-25 120.2 184 47.3
Duzib211G0291 Durio zibethinus HOM05D000915 ORTHO05D001662 3.4e-25 119.4 184 48.9
Migut.D00229 Erythranthe guttata HOM05D000915 ORTHO05D001662 4.4e-25 119.0 183 46.4
Peaxi162Scf01039g00110 Petunia axillaris HOM05D000915 ORTHO05D001662 9.8e-25 117.9 104 62.5
QL12p023996 Quercus lobata HOM05D000915 ORTHO05D001662 2.9e-24 116.3 105 63.8
Sc05g0004630 Simmondsia chinensis HOM05D000915 ORTHO05D001662 6.4e-24 115.2 126 54.0
Ciclev10019366m.g Citrus clementina HOM05D000915 ORTHO05D001662 1.1e-23 114.4 183 47.0
Sopen09g029270 Solanum pennellii HOM05D000915 ORTHO05D001662 3.2e-23 112.8 180 46.1
Solyc09g074420.4 Solanum lycopersicum HOM05D000915 ORTHO05D001662 4.1e-23 112.5 180 47.2
AUR62036655 Chenopodium quinoa HOM05D000915 ORTHO05D001662 9.2e-23 111.3 186 43.5
MD00G1056100 Malus domestica HOM05D000915 ORTHO05D001662 9.2e-23 111.3 186 43.5
Potri.002G207200 Populus trichocarpa HOM05D000915 ORTHO05D001662 1.2e-22 110.9 184 45.1
AUR62034617 Chenopodium quinoa HOM05D000915 ORTHO05D001662 1.6e-22 110.5 186 43.0
Nn3g21277 Nelumbo nucifera HOM05D000915 ORTHO05D001662 2.0e-22 110.2 185 43.8
Peaxi162Scf00067g00415 Petunia axillaris HOM05D000915 ORTHO05D001662 3.5e-22 109.4 112 55.4
EL10Ac7g17369 Beta vulgaris HOM05D000915 ORTHO05D001662 5.9e-22 108.6 183 42.6
Gohir.A12G008600 Gossypium hirsutum HOM05D000915 ORTHO05D001662 5.9e-22 108.6 185 45.4
Gohir.D12G008301 Gossypium hirsutum HOM05D000915 ORTHO05D001662 5.9e-22 108.6 184 45.1
MD11G1298100 Malus domestica HOM05D000915 ORTHO05D001662 7.8e-22 108.2 185 44.3
Sabra14G0100800 Salix brachista HOM05D000915 ORTHO05D001662 7.8e-22 108.2 184 46.2
Sabra02G0149600 Salix brachista HOM05D000915 ORTHO05D001662 1.3e-21 107.5 184 45.7
Gorai.008G008100 Gossypium raimondii HOM05D000915 ORTHO05D001662 1.7e-21 107.1 184 44.6
Cpa.g.sc9.162 Carica papaya HOM05D000915 ORTHO05D001662 3.0e-21 106.3 186 43.5
Prupe.8G252400 Prunus persica HOM05D000915 ORTHO05D001662 3.9e-21 105.9 186 43.5
Hund05375 Selenicereus undatus HOM05D000915 ORTHO05D001662 6.6e-21 105.1 185 43.8
CANSAT25G0242 Cannabis sativa HOM05D000915 ORTHO05D001662 3.3e-20 102.8 185 41.6
Oeu002705.2 Olea europaea HOM05D000915 ORTHO05D001662 3.3e-20 102.8 163 45.4
Aqoxy2G03131 Aquilegia oxysepala HOM05D000915 ORTHO05D001662 4.3e-20 102.4 161 41.6
PGR119G0738 Punica granatum HOM05D000915 ORTHO05D001662 5.6e-20 102.1 182 42.9
CiPaw.08G100400 Carya illinoinensis HOM05D000915 ORTHO05D001662 7.3e-20 101.7 161 44.7
arahy.Tifrunner.gnm1.ann1.11QJS0 Arachis hypogaea HOM05D000915 ORTHO05D001662 1.2e-19 100.9 104 55.8
Potri.014G135200 Populus trichocarpa HOM05D000915 ORTHO05D001662 1.2e-19 100.9 186 41.4
GSVIVG01011007001 Vitis vinifera HOM05D000915 ORTHO05D001662 2.1e-19 100.1 186 46.8
Atru.chr5.1280 Acer truncatum HOM05D000915 ORTHO05D001662 3.6e-19 99.4 183 42.6
FvH4_2g24740 Fragaria vesca HOM05D000915 ORTHO05D001662 3.6e-19 99.4 186 43.0
THA.LOC104817531 Tarenaya hassleriana HOM05D000915 ORTHO05D001662 3.6e-19 99.4 184 40.8
Glyma.02G152400 Glycine max HOM05D000915 ORTHO05D001662 4.7e-19 99.0 75 66.7
Glyma.10G021800 Glycine max HOM05D000915 ORTHO05D001662 6.2e-19 98.6 104 58.7
Phvul.007G166500 Phaseolus vulgaris HOM05D000915 ORTHO05D001662 1.0e-18 97.8 114 55.3
Lalb_Chr06g0163301 Lupinus albus HOM05D000915 ORTHO05D001662 1.4e-18 97.4 76 63.2
Eucgr.L02072 Eucalyptus grandis HOM05D000915 ORTHO05D001662 1.8e-18 97.1 184 40.8
Actinidia24855 Actinidia chinensis HOM05D000915 ORTHO05D001662 3.1e-18 96.3 72 62.5
RcHm_v2.0_Chr6g0292561 Rosa chinensis HOM05D000915 ORTHO05D001662 3.1e-18 96.3 112 50.0
arahy.Tifrunner.gnm1.ann1.0KV6DQ Arachis hypogaea HOM05D000915 ORTHO05D001662 4.0e-18 95.9 184 39.7
VMungo0720G2626 Vigna mungo HOM05D000915 ORTHO05D001662 4.0e-18 95.9 114 51.8
Eucgr.H01212 Eucalyptus grandis HOM05D000915 ORTHO05D001662 5.2e-18 95.5 184 41.3
TWI23G0247 Tripterygium wilfordii HOM05D000915 ORTHO05D001662 5.2e-18 95.5 186 40.9
Thhalv10001363m.g Eutrema salsugineum HOM05D000915 ORTHO05D001662 1.5e-17 94.0 124 46.0
Nitab4.5_0004150g0070 Nicotiana tabacum HOM05D000915 ORTHO05D001662 1.5e-17 94.0 161 44.7
Sed0006542 Sechium edule HOM05D000915 ORTHO05D001662 1.5e-17 94.0 135 44.4
CsaV3_7G028270 Cucumis sativus L. HOM05D000915 ORTHO05D001662 2.6e-17 93.2 142 45.1
CARHR143330 Cardamine hirsuta HOM05D000915 ORTHO05D001662 3.4e-17 92.8 183 37.2
PSO170G3155 Papaver somniferum HOM05D000915 ORTHO05D001662 3.4e-17 92.8 112 51.8
Lj5g0010897 Lotus japonicus HOM05D000915 ORTHO05D001662 4.4e-17 92.4 121 48.8
ATR0706G098 Amborella trichopoda HOM05D000915 ORTHO05D001662 5.8e-17 92.0 68 69.1
AL4G47530 Arabidopsis lyrata HOM05D000915 ORTHO05D001662 5.8e-17 92.0 69 65.2
PSO445G0021 Papaver somniferum HOM05D000915 ORTHO05D001662 7.5e-17 91.7 112 50.9
Sp4g29860 Schrenkiella parvula HOM05D000915 ORTHO05D001662 7.5e-17 91.7 183 37.7
BolC4t28784H Brassica oleracea HOM05D000915 ORTHO05D001662 1.3e-16 90.9 92 50.0
Medtr1g088980 Medicago truncatula HOM05D000915 ORTHO05D001662 4.9e-16 89.0 68 64.7
Psat6g167960 Pisum sativum HOM05D000915 ORTHO05D001662 6.4e-16 88.6 186 41.4
ClCG09G006500 Citrullus lanatus HOM05D000915 ORTHO05D001662 8.3e-16 88.2 185 41.1
MELO3C015895.2 Cucumis melo HOM05D000915 ORTHO05D001662 8.3e-16 88.2 184 41.8
Ah.15g093710 Amaranthus hybridus HOM05D000915 ORTHO05D001662 1.4e-15 87.4 220 36.8
Lj2A1185G18 Lonicera japonica HOM05D000915 ORTHO05D001662 3.2e-15 86.3 43 88.4
AT2G47940 Arabidopsis thaliana HOM05D000915 ORTHO05D001662 4.1e-15 85.9 184 37.0
Ca_10376_v3 Cicer arietinum L. HOM05D000915 ORTHO05D001662 7.0e-15 85.1 153 38.6
Lalb_Chr02g0143091 Lupinus albus HOM05D000915 ORTHO05D001662 3.5e-14 82.8 126 45.2
CDE02G4599 Ceratophyllum demersum HOM05D000915 ORTHO05D001662 1.3e-13 80.9 83 57.8
Carub.0004s3066 Capsella rubella HOM05D000915 ORTHO05D001662 1.7e-13 80.5 183 36.1
HPP92_015999 Vanilla planifolia HOM05D000915 ORTHO05D001662 1.7e-13 80.5 110 47.3
SEGI_41106 Sequoiadendron giganteum HOM05D000915 ORTHO05D001662 3.9e-13 79.3 101 49.5
A04p35140 Brassica napus HOM05D000915 ORTHO05D001662 1.1e-12 77.8 139 43.9
CAN.G426.22 Capsicum annuum HOM05D000915 ORTHO05D001662 4.7e-11 72.4 160 41.9
Nitab4.5_0002708g0030 Nicotiana tabacum HOM05D000915 ORTHO05D001662 3.1e-10 69.7 166 39.8
Nitab4.5_0000824g0130 Nicotiana tabacum HOM05D000915 ORTHO05D001662 4.0e-10 69.3 85 52.9
Nitab4.5_0002093g0190 Nicotiana tabacum HOM05D000915 ORTHO05D001662 4.0e-10 69.3 129 41.9
Zm00001eb418000 Zea mays HOM05D000915 ORTHO05D001662 4.0e-10 69.3 48 66.7
Os05g0147500 Oryza sativa ssp. japonica HOM05D000915 ORTHO05D001662 8.9e-10 68.2 48 64.6
Aa31LG3G1570 Aethionema arabicum HOM05D000915 ORTHO05D001662 1.5e-09 67.4 40 72.5
AagrBONN_evm.TU.Sc2ySwM_368.1276 Anthoceros agrestis HOM05D000915 ORTHO05D001662 2.0e-09 67.0 35 80.0
TPR.G16941 Trifolium pratense HOM05D000915 ORTHO05D001662 7.5e-09 65.1 91 45.1
Pp3c8_7470 Physcomitrium patens HOM05D000915 ORTHO05D001662 9.8e-09 64.7 34 79.4
CBR_g2906 Chara braunii HOM05D000915 ORTHO05D001662 1.3e-08 64.3 43 65.1
BraA04t18950Z Brassica rapa HOM05D000915 ORTHO05D001662 4.9e-08 62.4 147 38.1
SalBow3G4022 Salvia bowleyana HOM05D000915 ORTHO05D001662 1.4e-07 60.8 164 35.4
CBR_g12798 Chara braunii HOM05D000915 ORTHO05D001662 1.2e-06 57.8 128 34.4
CBR_g50405 Chara braunii HOM05D000915 ORTHO05D001662 1.2e-06 57.8 51 49.0
Cre03.g200655 Chlamydomonas reinhardtii HOM05D000915 ORTHO05D001662 1.2e-06 57.8 46 56.5
Mapoly0024s0090 Marchantia polymorpha HOM05D000915 ORTHO05D001662 4.6e-06 55.8 60 46.7


User provided reference genes

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