Gene: Carub.0004s3066

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s3066
  • Transcript Identifier Carub.0004s3066.1
  • Gene Type Coding gene
  • Location scaffold_4 : 14960455-14964252 : negative

Gene Family Information

  • ID HOM05D000915
  • #Genes/#Species 656/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s3066.v1.1
  • pacid 39236612
  • synonym Carubv10024950m.g

Descriptions

  • Description PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT2G47940
GO:0010206
ISO
PLAZA Integrative Orthologyphotosystem II repair AT2G47940
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G47940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G47940
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G47940
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G47940
GO:0009533
ISO
PLAZA Integrative Orthologychloroplast stromal thylakoid AT2G47940
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT2G47940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold
IPR001940 Peptidase S1C
IPR036034 PDZ superfamily
IPR041517 Protease Do-like, PDZ domain
IPR009003 Peptidase S1, PA clan
IPR001478 PDZ domain
Mapman id Description
19.4.2.3 Protein homeostasis.proteolysis.serine-type peptidase activities.S1-class protease (Deg)