Gene: Sopen06g035870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g035870
  • Transcript Identifier Sopen06g035870.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 60608174-60620897 : positive

Gene Family Information

  • ID HOM05D000915
  • #Genes/#Species 656/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g035870.1

Descriptions

  • Description Encodes DegP2 protease (DEGP2) | nuclear gene for chloroplast product. | DEGP protease 2 (DEGP2) | FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity | INVOLVED IN: photosystem II repair, proteolysis | LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 , Serine/cysteine peptidase, trypsin-like , Peptidase S1C, HrtA/DegP2/Q/S , Peptidase S1/S6, chymotrypsin/Hap , PDZ/DHR/GLGF | BEST Arabidopsis thaliana protein match is: DegP protease 9
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT2G47940
GO:0010206
ISO
PLAZA Integrative Orthologyphotosystem II repair AT2G47940
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G47940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004252
IEA
InterProserine-type endopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G47940
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G47940
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G47940
GO:0009533
ISO
PLAZA Integrative Orthologychloroplast stromal thylakoid AT2G47940
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT2G47940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009003 Peptidase S1, PA clan
IPR036034 PDZ superfamily
IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold
IPR001940 Peptidase S1C
IPR041517 Protease Do-like, PDZ domain
Mapman id Description
19.4.2.3 Protein homeostasis.proteolysis.serine-type peptidase activities.S1-class protease (Deg)