Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g14880 Coffea canephora HOM05D000228 ORTHO05D001545 2.1e-45 185.3 90 100.0
Cc09_g09200 Coffea canephora HOM05D000228 ORTHO05D001545 3.9e-31 137.9 68 95.6
Cc09_g09210 Coffea canephora HOM05D000228 ORTHO05D001545 1.7e-26 122.5 68 86.8
MSTRG.17722 Avicennia marina HOM05D000228 ORTHO05D001545 3.6e-21 104.8 66 74.2
SGA_v2.0_scaffold110G31200 Striga asiatica HOM05D000228 ORTHO05D001545 6.2e-21 104.0 62 77.4
Nitab4.5_0004015g0070 Nicotiana tabacum HOM05D000228 ORTHO05D001545 1.8e-20 102.4 66 75.8
Nitab4.5_0004839g0020 Nicotiana tabacum HOM05D000228 ORTHO05D001545 5.2e-20 100.9 64 76.6
CSS0025979 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 6.8e-20 100.5 68 67.6
CSS0035598 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 6.8e-20 100.5 68 67.6
GSVIVG01025079001 Vitis vinifera HOM05D000228 ORTHO05D001545 2.6e-19 98.6 60 76.7
Actinidia03765 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.3e-18 96.3 68 67.6
Solyc11g072730.2 Solanum lycopersicum HOM05D000228 ORTHO05D001545 1.3e-18 96.3 63 71.4
Sopen11g030400 Solanum pennellii HOM05D000228 ORTHO05D001545 1.3e-18 96.3 63 71.4
CAN.G1190.18 Capsicum annuum HOM05D000228 ORTHO05D001545 1.7e-18 95.9 60 75.0
Peaxi162Scf00616g00511 Petunia axillaris HOM05D000228 ORTHO05D001545 1.7e-18 95.9 62 71.0
Lj8A494G9 Lonicera japonica HOM05D000228 ORTHO05D001545 2.9e-18 95.1 66 69.7
DCAR_018871 Daucus carota HOM05D000228 ORTHO05D001545 3.8e-18 94.7 68 63.2
Sed0007851 Sechium edule HOM05D000228 ORTHO05D001545 1.9e-17 92.4 60 71.7
THA.LOC104810826 Tarenaya hassleriana HOM05D000228 ORTHO05D001545 2.4e-17 92.0 60 68.3
Dinv03761 Davidia involucrata HOM05D000228 ORTHO05D001545 3.2e-17 91.7 63 69.8
Dinv27600 Davidia involucrata HOM05D000228 ORTHO05D001545 3.2e-17 91.7 63 69.8
vmacro12980 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 3.2e-17 91.7 60 70.0
Ciclev10027681m.g Citrus clementina HOM05D000228 ORTHO05D001545 4.2e-17 91.3 60 73.3
Hma1.2p1_0746F.1_g212240 Hydrangea macrophylla HOM05D000228 ORTHO05D001545 4.2e-17 91.3 63 68.3
Rhsim01G0223300 Rhododendron simsii HOM05D000228 ORTHO05D001545 4.2e-17 91.3 68 63.2
ClCG03G002140 Citrullus lanatus HOM05D000228 ORTHO05D001545 7.1e-17 90.5 58 70.7
MELO3C026854.2 Cucumis melo HOM05D000228 ORTHO05D001545 7.1e-17 90.5 68 61.8
CsaV3_1G012790 Cucumis sativus L. HOM05D000228 ORTHO05D001545 7.1e-17 90.5 68 61.8
Duzib150G0751 Durio zibethinus HOM05D000228 ORTHO05D001545 7.1e-17 90.5 60 71.7
CiPaw.14G074800 Carya illinoinensis HOM05D000228 ORTHO05D001545 1.2e-16 89.7 60 70.0
Gohir.D03G132200 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.2e-16 89.7 60 70.0
Gorai.003G139100 Gossypium raimondii HOM05D000228 ORTHO05D001545 1.2e-16 89.7 60 70.0
Cpa.g.sc7.210 Carica papaya HOM05D000228 ORTHO05D001545 2.1e-16 89.0 60 68.3
Aa31LG1G12160 Aethionema arabicum HOM05D000228 ORTHO05D001545 2.7e-16 88.6 64 65.6
Haze_23976 Corylus avellana HOM05D000228 ORTHO05D001545 4.6e-16 87.8 68 63.2
QL06p007447 Quercus lobata HOM05D000228 ORTHO05D001545 4.6e-16 87.8 58 70.7
QL93p0200_0051 Quercus lobata HOM05D000228 ORTHO05D001545 4.6e-16 87.8 58 70.7
Thecc.03G012000 Theobroma cacao HOM05D000228 ORTHO05D001545 7.8e-16 87.0 59 67.8
Ah.04g153590 Amaranthus hybridus HOM05D000228 ORTHO05D001545 1.3e-15 86.3 60 68.3
Migut.A00876 Erythranthe guttata HOM05D000228 ORTHO05D001545 1.3e-15 86.3 60 66.7
Migut.C00025 Erythranthe guttata HOM05D000228 ORTHO05D001545 2.3e-15 85.5 60 66.7
Thhalv10012446m.g Eutrema salsugineum HOM05D000228 ORTHO05D001545 3.0e-15 85.1 64 64.1
PSO384G5084 Papaver somniferum HOM05D000228 ORTHO05D001545 3.0e-15 85.1 64 60.9
PSO699G0040 Papaver somniferum HOM05D000228 ORTHO05D001545 3.0e-15 85.1 64 60.9
BraA02t05745Z Brassica rapa HOM05D000228 ORTHO05D001545 5.1e-15 84.3 64 59.4
CARHR273660 Cardamine hirsuta HOM05D000228 ORTHO05D001545 5.1e-15 84.3 64 60.9
AUR62025018 Chenopodium quinoa HOM05D000228 ORTHO05D001545 5.1e-15 84.3 61 62.3
Glyma.11G147317 Glycine max HOM05D000228 ORTHO05D001545 5.1e-15 84.3 68 58.8
Lalb_Chr01g0003921 Lupinus albus HOM05D000228 ORTHO05D001545 5.1e-15 84.3 68 60.3
Atru.chr3.3761 Acer truncatum HOM05D000228 ORTHO05D001545 8.7e-15 83.6 60 65.0
COL.COLO4_18403 Corchorus olitorius HOM05D000228 ORTHO05D001545 8.7e-15 83.6 60 65.0
PSO017G3640 Papaver somniferum HOM05D000228 ORTHO05D001545 8.7e-15 83.6 63 61.9
Sc19g0005360 Simmondsia chinensis HOM05D000228 ORTHO05D001545 8.7e-15 83.6 68 61.8
C02p11920 Brassica napus HOM05D000228 ORTHO05D001545 1.1e-14 83.2 64 59.4
BolC2t07289H Brassica oleracea HOM05D000228 ORTHO05D001545 1.5e-14 82.8 64 57.8
ECA247G0560 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.5e-14 82.8 66 63.6
Nn2g12369 Nelumbo nucifera HOM05D000228 ORTHO05D001545 1.5e-14 82.8 64 62.5
AT5G60040 Arabidopsis thaliana HOM05D000228 ORTHO05D001545 2.5e-14 82.0 64 59.4
AUR62006512 Chenopodium quinoa HOM05D000228 ORTHO05D001545 2.5e-14 82.0 60 63.3
PSO017G0220 Papaver somniferum HOM05D000228 ORTHO05D001545 3.3e-14 81.6 63 61.9
TAR623G0006 Trochodendron aralioides HOM05D000228 ORTHO05D001545 4.3e-14 81.3 63 60.3
Sp6g21700 Schrenkiella parvula HOM05D000228 ORTHO05D001545 5.6e-14 80.9 64 57.8
PSO478G0478 Papaver somniferum HOM05D000228 ORTHO05D001545 7.3e-14 80.5 63 60.3
Sabra16G0221600 Salix brachista HOM05D000228 ORTHO05D001545 7.3e-14 80.5 60 66.7
Aa31LG1G12170 Aethionema arabicum HOM05D000228 ORTHO05D001545 9.6e-14 80.1 64 59.4
EL10Ac3g06609 Beta vulgaris HOM05D000228 ORTHO05D001545 9.6e-14 80.1 60 65.0
Manes.17G000400 Manihot esculenta HOM05D000228 ORTHO05D001545 9.6e-14 80.1 67 58.2
BcaB05g22610 Brassica carinata HOM05D000228 ORTHO05D001545 1.2e-13 79.7 60 58.3
EL10Ac1g02243 Beta vulgaris HOM05D000228 ORTHO05D001545 1.6e-13 79.3 60 63.3
Phvul.011G070100 Phaseolus vulgaris HOM05D000228 ORTHO05D001545 2.1e-13 79.0 68 55.9
Potri.001G341900 Populus trichocarpa HOM05D000228 ORTHO05D001545 2.1e-13 79.0 60 65.0
VMungo1127G1617 Vigna mungo HOM05D000228 ORTHO05D001545 2.8e-13 78.6 68 54.4
arahy.Tifrunner.gnm1.ann1.E1FMMY Arachis hypogaea HOM05D000228 ORTHO05D001545 3.6e-13 78.2 68 55.9
arahy.Tifrunner.gnm1.ann1.P9ZJRF Arachis hypogaea HOM05D000228 ORTHO05D001545 3.6e-13 78.2 68 55.9
CANSAT56G4454 Cannabis sativa HOM05D000228 ORTHO05D001545 4.7e-13 77.8 60 56.7
Carub.0008s2074 Capsella rubella HOM05D000228 ORTHO05D001545 4.7e-13 77.8 64 56.2
Lj1g0011731 Lotus japonicus HOM05D000228 ORTHO05D001545 6.2e-13 77.4 60 60.0
PGR119G1503 Punica granatum HOM05D000228 ORTHO05D001545 8.1e-13 77.0 60 58.3
TWI75G1460 Tripterygium wilfordii HOM05D000228 ORTHO05D001545 8.1e-13 77.0 60 63.3
Psat7g221400 Pisum sativum HOM05D000228 ORTHO05D001545 1.4e-12 76.3 68 54.4
Ca_19216_v3 Cicer arietinum L. HOM05D000228 ORTHO05D001545 1.8e-12 75.9 68 52.9
Aqoxy4G03122 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 4.0e-12 74.7 60 60.0
HanXRQChr04g0106851 Helianthus annuus HOM05D000228 ORTHO05D001545 9.0e-12 73.6 67 55.2
TPR.G2993 Trifolium pratense HOM05D000228 ORTHO05D001545 3.4e-11 71.6 58 60.3
Aqoxy4G03124 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 9.9e-11 70.1 60 53.3
Prupe.6G089600 Prunus persica HOM05D000228 ORTHO05D001545 1.3e-10 69.7 68 50.0
Medtr4g061700 Medicago truncatula HOM05D000228 ORTHO05D001545 4.9e-10 67.8 58 50.0
Lsat_1_v5_gn_9_21100 Lactuca sativa HOM05D000228 ORTHO05D001545 8.4e-10 67.0 62 54.8
RcHm_v2.0_Chr3g0469321 Rosa chinensis HOM05D000228 ORTHO05D001545 8.4e-10 67.0 64 50.0
Zm00001eb078830 Zea mays HOM05D000228 ORTHO05D001545 8.4e-10 67.0 60 53.3
Lsat_1_v5_gn_2_6980 Lactuca sativa HOM05D000228 ORTHO05D001545 1.1e-09 66.6 62 53.2
ATR0594G163 Amborella trichopoda HOM05D000228 ORTHO05D001545 1.9e-09 65.9 59 52.5
ECA233G4378 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.9e-09 65.9 65 52.3
SEGI_34000 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 2.4e-09 65.5 62 48.4
COL.COLO4_14804 Corchorus olitorius HOM05D000228 ORTHO05D001545 3.2e-09 65.1 57 54.4
MD09G1157000 Malus domestica HOM05D000228 ORTHO05D001545 9.3e-09 63.5 60 45.0
Medtr4g061800 Medicago truncatula HOM05D000228 ORTHO05D001545 9.3e-09 63.5 60 50.0
Os04g0492300 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D001545 9.3e-09 63.5 60 48.3
RcHm_v2.0_Chr5g0061861 Rosa chinensis HOM05D000228 ORTHO05D001545 4.6e-08 61.2 68 39.7
AagrBONN_evm.TU.Sc2ySwM_362.2196 Anthoceros agrestis HOM05D000228 ORTHO05D001545 6.0e-08 60.8 61 45.9
Peaxi162Scf00616g00635 Petunia axillaris HOM05D000228 ORTHO05D001545 1.0e-07 60.1 44 65.9
FAN16G3688 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.3e-07 59.7 68 41.2
FAN21G2820 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.3e-07 59.7 68 41.2
Pp3c17_4860 Physcomitrium patens HOM05D000228 ORTHO05D001545 1.3e-07 59.7 46 56.5
FvH4_3g34290 Fragaria vesca HOM05D000228 ORTHO05D001545 1.7e-07 59.3 68 41.2
FAN11G0447 Fragaria x ananassa HOM05D000228 ORTHO05D001545 2.3e-07 58.9 68 41.2
HanXRQChr08g0230641 Helianthus annuus HOM05D000228 ORTHO05D001545 3.9e-07 58.2 62 45.2
SMO143G0104 Selaginella moellendorffii HOM05D000228 ORTHO05D001545 5.1e-07 57.8 63 42.9
FAN02G2221 Fragaria x ananassa HOM05D000228 ORTHO05D001545 2.5e-06 55.5 62 40.3
Mapoly0051s0017 Marchantia polymorpha HOM05D000228 ORTHO05D001545 2.5e-06 55.5 61 44.3


User provided reference genes

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