Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 5.4e-262 907.1 464 100.0
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 7.0e-209 730.7 463 79.0
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 2.0e-208 729.2 470 78.5
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 3.5e-208 728.4 470 78.5
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 1.7e-207 726.1 442 82.8
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 5.0e-207 724.5 470 78.1
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 5.0e-207 724.5 469 77.6
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.9e-206 722.6 434 81.8
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 2.5e-206 722.2 434 81.8
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 4.0e-204 714.9 470 77.0
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 6.7e-204 714.1 470 77.2
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 9.7e-203 710.3 448 79.2
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 1.3e-202 709.9 448 78.6
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 2.2e-202 709.1 470 75.7
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 6.3e-202 707.6 468 76.7
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 6.3e-202 707.6 468 76.7
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.4e-201 706.4 452 78.5
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 1.8e-201 706.1 454 77.5
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 7.0e-201 704.1 469 77.0
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 7.0e-201 704.1 507 72.2
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 1.0e-199 700.3 432 81.0
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 2.2e-199 699.1 444 78.6
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 3.2e-198 695.3 457 76.4
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 4.2e-198 694.9 436 79.4
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 3.6e-197 691.8 455 75.8
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 4.7e-197 691.4 469 73.3
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 1.0e-196 690.3 455 75.8
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 3.0e-196 688.7 470 74.7
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 4.0e-196 688.3 468 74.6
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 4.0e-196 688.3 443 78.3
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 5.2e-196 688.0 444 76.8
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 8.8e-196 687.2 461 74.6
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 8.8e-196 687.2 450 76.2
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 4.4e-195 684.9 444 77.3
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 4.4e-195 684.9 445 77.5
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 4.4e-195 684.9 446 76.5
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 5.7e-195 684.5 470 74.9
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 9.8e-195 683.7 380 87.1
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 9.8e-195 683.7 456 75.4
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 2.8e-194 682.2 438 78.5
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 6.3e-194 681.0 454 75.1
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 1.8e-193 679.5 434 77.0
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 3.1e-193 678.7 455 74.9
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 1.6e-192 676.4 467 73.9
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.0e-191 673.7 462 74.2
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 1.7e-191 672.9 446 74.7
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 2.2e-191 672.5 405 80.5
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 2.9e-191 672.2 444 74.8
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 5.0e-191 671.4 446 74.4
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 2.5e-190 669.1 448 76.6
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 2.5e-190 669.1 444 75.2
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 7.2e-190 667.5 444 75.2
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 2.1e-189 666.0 451 74.3
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 1.8e-188 662.9 467 72.2
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 2.3e-188 662.5 394 81.2
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 5.2e-188 661.4 444 74.3
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 2.6e-187 659.1 381 83.5
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 2.2e-186 656.0 437 73.7
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 2.2e-186 656.0 394 80.7
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 5.9e-184 647.9 442 72.9
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 5.9e-184 647.9 443 72.9
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 5.9e-184 647.9 457 72.6
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 2.3e-183 646.0 535 63.6
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 6.6e-183 644.4 439 74.5
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 8.6e-183 644.0 460 72.0
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 1.9e-182 642.9 564 61.2
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 3.3e-182 642.1 444 71.8
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 2.1e-181 639.4 443 72.7
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 2.8e-181 639.0 556 63.1
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 4.7e-181 638.3 394 79.4
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 3.0e-180 635.6 367 81.7
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 5.2e-180 634.8 375 80.3
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 1.2e-179 633.6 445 70.8
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 1.3e-178 630.2 442 71.5
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 3.7e-178 628.6 443 70.0
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 4.1e-177 625.2 431 72.9
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 2.0e-176 622.9 445 69.0
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 1.0e-175 620.5 460 67.6
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 1.3e-175 620.2 450 68.7
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 8.6e-175 617.5 446 69.7
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 1.1e-174 617.1 460 67.2
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 1.5e-174 616.7 427 72.8
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 4.3e-174 615.1 435 71.5
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 1.2e-173 613.6 442 70.8
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 4.7e-173 611.7 475 67.2
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 1.5e-171 606.7 449 68.6
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 3.6e-165 585.5 473 67.0
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 6.8e-164 581.3 393 73.3
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.0e-163 579.7 430 67.7
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 2.6e-163 579.3 471 66.2
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.3e-162 577.0 378 77.5
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 4.0e-156 555.4 525 59.4
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.4e-153 547.0 600 52.8
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 2.7e-152 542.7 343 78.1
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 4.6e-152 542.0 494 61.3
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 1.0e-151 540.8 384 68.5
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 1.2e-149 533.9 430 63.5
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 2.1e-149 533.1 406 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 2.0e-147 526.6 406 64.3
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 1.2e-139 500.7 423 61.0
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 4.5e-131 472.2 270 80.7
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 9.6e-118 427.9 308 69.8
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 4.3e-102 375.9 250 74.0
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 4.1e-92 342.8 267 63.7
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 3.0e-87 326.6 413 45.3
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 1.4e-79 301.2 178 80.9
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 2.4e-76 290.4 190 75.3
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 1.0e-71 275.0 225 68.9
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 9.2e-68 261.9 166 78.9
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 2.7e-67 260.4 175 74.9
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.5e-65 254.6 167 74.9
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 7.3e-65 252.3 143 86.0
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 1.0e-58 231.9 349 40.7
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 1.8e-55 221.1 108 89.8
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 4.4e-54 216.5 367 38.7
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.1e-48 197.6 167 63.5
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 8.1e-48 195.7 177 60.5
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 8.6e-42 175.6 109 71.6
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 3.8e-37 160.2 128 69.5
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 2.4e-28 131.0 179 48.0
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 4.2e-28 130.2 177 49.2
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 5.1e-26 123.2 66 81.8
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 1.5e-22 111.7 264 29.2


User provided reference genes

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