Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2589 Capsella rubella HOM05D000042 ORTHO05D003657 4.5e-32 140.6 68 100.0
AL8G42560 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.0e-20 102.8 58 84.5
AT1G77080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 3.6e-13 77.8 51 76.5
Carub.0002s2396 Capsella rubella HOM05D000042 ORTHO05D003657 4.0e-12 74.3 39 89.7
AT5G65060 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 1.2e-11 72.8 46 78.3
Thhalv10005413m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 2.0e-11 72.0 39 84.6
Thhalv10004949m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 5.7e-11 70.5 48 75.0
AL2G37250 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 9.8e-11 69.7 39 84.6
AT5G65050 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 1.7e-10 68.9 40 82.5
AL233U10010 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 2.2e-10 68.6 40 80.0
A02p43650 Brassica napus HOM05D000042 ORTHO05D003657 6.3e-10 67.0 40 77.5
A02p43670 Brassica napus HOM05D000042 ORTHO05D003657 1.1e-09 66.2 40 77.5
BcaB02g09858 Brassica carinata HOM05D000042 ORTHO05D003657 4.1e-09 64.3 39 74.4
BcaC03g18301 Brassica carinata HOM05D000042 ORTHO05D003657 4.1e-09 64.3 40 77.5
Sp2g28150 Schrenkiella parvula HOM05D000042 ORTHO05D003657 7.0e-09 63.5 39 79.5
BcaB07g29773 Brassica carinata HOM05D000042 ORTHO05D003657 9.1e-09 63.2 40 75.0
C02p63770 Brassica napus HOM05D000042 ORTHO05D003657 9.1e-09 63.2 39 76.9
Aa31LG1G16900 Aethionema arabicum HOM05D000042 ORTHO05D003657 1.6e-08 62.4 46 63.0
BcaB07g29771 Brassica carinata HOM05D000042 ORTHO05D003657 2.7e-08 61.6 47 63.8
BcaB07g29772 Brassica carinata HOM05D000042 ORTHO05D003657 3.5e-08 61.2 40 75.0
A06p31880 Brassica napus HOM05D000042 ORTHO05D003657 3.5e-08 61.2 39 71.8
AT5G65070 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 4.5e-08 60.8 40 70.0
C03p61060 Brassica napus HOM05D000042 ORTHO05D003657 4.5e-08 60.8 43 69.8
C02p63750 Brassica napus HOM05D000042 ORTHO05D003657 5.9e-08 60.5 46 67.4
BolC2t12438H Brassica oleracea HOM05D000042 ORTHO05D003657 5.9e-08 60.5 46 67.4
BcaB02g09859 Brassica carinata HOM05D000042 ORTHO05D003657 7.7e-08 60.1 40 72.5
BcaC03g18299 Brassica carinata HOM05D000042 ORTHO05D003657 7.7e-08 60.1 45 68.9
A06p31890 Brassica napus HOM05D000042 ORTHO05D003657 7.7e-08 60.1 41 70.7
BolC2t12443H Brassica oleracea HOM05D000042 ORTHO05D003657 7.7e-08 60.1 45 68.9
BolC3t18368H Brassica oleracea HOM05D000042 ORTHO05D003657 1.0e-07 59.7 43 67.4
CARHR278990 Cardamine hirsuta HOM05D000042 ORTHO05D003657 1.3e-07 59.3 48 66.7
AL8G42580 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.7e-07 58.9 39 69.2
BcaC03g18294 Brassica carinata HOM05D000042 ORTHO05D003657 2.3e-07 58.5 46 65.2
C02p63700 Brassica napus HOM05D000042 ORTHO05D003657 2.3e-07 58.5 46 65.2
AT5G65080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 3.8e-07 57.8 48 58.3
BraA02t09290Z Brassica rapa HOM05D000042 ORTHO05D003657 8.6e-07 56.6 39 71.8
Carub.0008s2592 Capsella rubella HOM05D000042 ORTHO05D003657 8.6e-07 56.6 39 66.7
CARHR278980 Cardamine hirsuta HOM05D000042 ORTHO05D003657 4.2e-06 54.3 40 67.5


User provided reference genes

Program Settings