Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30052_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 2.4e-113 412.1 205 100.0
Ca_08460_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 7.3e-102 374.0 194 97.4
TPR.G3725 Trifolium pratense HOM05D004528 ORTHO05D005815 6.2e-101 370.9 191 95.8
Psat3g072560 Pisum sativum HOM05D004528 ORTHO05D005815 1.5e-99 366.3 191 94.8
Medtr7g091650 Medicago truncatula HOM05D004528 ORTHO05D005815 2.0e-99 365.9 191 96.3
Lj4g0008156 Lotus japonicus HOM05D004528 ORTHO05D005815 1.2e-93 346.7 191 91.6
Lalb_Chr13g0299741 Lupinus albus HOM05D004528 ORTHO05D005815 4.7e-93 344.7 191 90.6
Glyma.13G103500 Glycine max HOM05D004528 ORTHO05D005815 4.0e-92 341.7 191 90.1
Glyma.17G055500 Glycine max HOM05D004528 ORTHO05D005815 2.0e-91 339.3 191 89.5
Dinv36760 Davidia involucrata HOM05D004528 ORTHO05D005815 5.8e-91 337.8 191 88.5
Thecc.09G090300 Theobroma cacao HOM05D004528 ORTHO05D005815 1.7e-90 336.3 191 89.0
GSVIVG01015212001 Vitis vinifera HOM05D004528 ORTHO05D005815 2.9e-90 335.5 191 88.5
Haze_25904 Corylus avellana HOM05D004528 ORTHO05D005815 3.8e-90 335.1 191 89.0
Potri.006G221700 Populus trichocarpa HOM05D004528 ORTHO05D005815 3.8e-90 335.1 191 87.4
CSS0033534 Camellia sinensis var. sinensis HOM05D004528 ORTHO05D005815 6.4e-90 334.3 191 88.0
Prupe.7G211100 Prunus persica HOM05D004528 ORTHO05D005815 8.4e-90 334.0 191 88.0
FAN28G2769 Fragaria x ananassa HOM05D004528 ORTHO05D005815 1.4e-89 333.2 191 86.9
RcHm_v2.0_Chr2g0093221 Rosa chinensis HOM05D004528 ORTHO05D005815 1.4e-89 333.2 191 86.9
arahy.Tifrunner.gnm1.ann1.A138U3 Arachis hypogaea HOM05D004528 ORTHO05D005815 2.4e-89 332.4 191 88.0
Nn6g35452 Nelumbo nucifera HOM05D004528 ORTHO05D005815 3.2e-89 332.0 191 86.9
QL02p062827 Quercus lobata HOM05D004528 ORTHO05D005815 3.2e-89 332.0 191 87.4
ClCG11G001780 Citrullus lanatus HOM05D004528 ORTHO05D005815 4.2e-89 331.6 191 85.9
FAN19G1322 Fragaria x ananassa HOM05D004528 ORTHO05D005815 4.2e-89 331.6 191 86.9
FvH4_1g07290 Fragaria vesca HOM05D004528 ORTHO05D005815 5.4e-89 331.3 191 86.4
FAN23G0078 Fragaria x ananassa HOM05D004528 ORTHO05D005815 5.4e-89 331.3 191 86.4
Rhsim05G0022000 Rhododendron simsii HOM05D004528 ORTHO05D005815 7.1e-89 330.9 191 86.4
Manes.16G102700 Manihot esculenta HOM05D004528 ORTHO05D005815 9.3e-89 330.5 191 86.4
TAR626G1836 Trochodendron aralioides HOM05D004528 ORTHO05D005815 9.3e-89 330.5 191 87.4
CiPaw.03G217000 Carya illinoinensis HOM05D004528 ORTHO05D005815 1.2e-88 330.1 191 88.0
Duzib150G1454 Durio zibethinus HOM05D004528 ORTHO05D005815 1.2e-88 330.1 191 86.9
arahy.Tifrunner.gnm1.ann1.PT0GJ5 Arachis hypogaea HOM05D004528 ORTHO05D005815 2.1e-88 329.3 191 87.4
Gorai.010G082500 Gossypium raimondii HOM05D004528 ORTHO05D005815 2.1e-88 329.3 191 86.9
MBI01_g09956_MAGBIO Magnolia biondii HOM05D004528 ORTHO05D005815 2.1e-88 329.3 191 86.9
MD15G1206300 Malus domestica HOM05D004528 ORTHO05D005815 2.1e-88 329.3 191 86.4
FAN26G2732 Fragaria x ananassa HOM05D004528 ORTHO05D005815 2.7e-88 328.9 191 85.9
FAN26G1375 Fragaria x ananassa HOM05D004528 ORTHO05D005815 3.5e-88 328.6 191 85.9
VMungo1215G0680 Vigna mungo HOM05D004528 ORTHO05D005815 3.5e-88 328.6 191 88.0
CsaV3_2G001490 Cucumis sativus L. HOM05D004528 ORTHO05D005815 4.6e-88 328.2 191 84.3
DCAR_011978 Daucus carota HOM05D004528 ORTHO05D005815 4.6e-88 328.2 191 86.4
Ciclev10008462m.g Citrus clementina HOM05D004528 ORTHO05D005815 6.0e-88 327.8 191 86.9
Phvul.003G137300 Phaseolus vulgaris HOM05D004528 ORTHO05D005815 6.0e-88 327.8 190 88.9
TWI34G0432 Tripterygium wilfordii HOM05D004528 ORTHO05D005815 6.0e-88 327.8 191 86.4
Sed0012435 Sechium edule HOM05D004528 ORTHO05D005815 7.8e-88 327.4 191 85.3
MD02G1077700 Malus domestica HOM05D004528 ORTHO05D005815 1.3e-87 326.6 191 85.9
COL.COLO4_18209 Corchorus olitorius HOM05D004528 ORTHO05D005815 1.7e-87 326.2 191 85.9
Hma1.2p1_0800F.1_g220090 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 3.0e-87 325.5 192 85.4
Hma1.2p1_0800F.1_g220100 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 3.0e-87 325.5 192 85.4
Migut.J00603 Erythranthe guttata HOM05D004528 ORTHO05D005815 3.9e-87 325.1 191 85.9
CANSAT56G0596 Cannabis sativa HOM05D004528 ORTHO05D005815 6.6e-87 324.3 191 84.8
CANSAT56G1313 Cannabis sativa HOM05D004528 ORTHO05D005815 6.6e-87 324.3 191 84.8
Lsat_1_v5_gn_7_37341 Lactuca sativa HOM05D004528 ORTHO05D005815 8.7e-87 323.9 191 84.3
Sopen07g017560 Solanum pennellii HOM05D004528 ORTHO05D005815 1.1e-86 323.6 191 83.2
Eucgr.C00900 Eucalyptus grandis HOM05D004528 ORTHO05D005815 1.5e-86 323.2 191 84.3
PGR142G0229 Punica granatum HOM05D004528 ORTHO05D005815 1.5e-86 323.2 200 81.5
Lj7A674G30 Lonicera japonica HOM05D004528 ORTHO05D005815 3.3e-86 322.0 192 84.9
Cc06_g11330 Coffea canephora HOM05D004528 ORTHO05D005815 4.3e-86 321.6 191 84.3
PGSC0003DMG400013151 Solanum tuberosum HOM05D004528 ORTHO05D005815 4.3e-86 321.6 191 83.2
ECA240G0155 Erigeron canadensis HOM05D004528 ORTHO05D005815 1.6e-85 319.7 191 83.2
AUR62033986 Chenopodium quinoa HOM05D004528 ORTHO05D005815 2.8e-85 318.9 191 82.7
MSTRG.17774 Avicennia marina HOM05D004528 ORTHO05D005815 3.6e-85 318.5 191 83.2
Oeu018425.1 Olea europaea HOM05D004528 ORTHO05D005815 4.8e-85 318.2 191 82.2
Solyc07g039210.4 Solanum lycopersicum HOM05D004528 ORTHO05D005815 4.8e-85 318.2 191 82.2
SalBow6G2464 Salvia bowleyana HOM05D004528 ORTHO05D005815 1.1e-84 317.0 191 82.7
BcaC05g26001 Brassica carinata HOM05D004528 ORTHO05D005815 1.8e-84 316.2 191 81.7
C05p19590 Brassica napus HOM05D004528 ORTHO05D005815 1.8e-84 316.2 191 81.7
C07p02330 Brassica napus HOM05D004528 ORTHO05D005815 1.8e-84 316.2 191 81.7
BolC5t30662H Brassica oleracea HOM05D004528 ORTHO05D005815 1.8e-84 316.2 191 81.7
BolC7t40641H Brassica oleracea HOM05D004528 ORTHO05D005815 1.8e-84 316.2 191 81.7
CAN.G1208.1 Capsicum annuum HOM05D004528 ORTHO05D005815 1.8e-84 316.2 191 83.2
BcaC06g36598 Brassica carinata HOM05D004528 ORTHO05D005815 2.4e-84 315.8 191 81.2
A07p01220 Brassica napus HOM05D004528 ORTHO05D005815 2.4e-84 315.8 191 81.2
BraA07t27910Z Brassica rapa HOM05D004528 ORTHO05D005815 2.4e-84 315.8 191 81.2
Nitab4.5_0011030g0010 Nicotiana tabacum HOM05D004528 ORTHO05D005815 2.4e-84 315.8 191 83.2
CARHR109990 Cardamine hirsuta HOM05D004528 ORTHO05D005815 3.1e-84 315.5 191 81.7
Aqoxy7G01232 Aquilegia oxysepala HOM05D004528 ORTHO05D005815 5.3e-84 314.7 191 83.8
SGA_v2.0_scaffold62G21604 Striga asiatica HOM05D004528 ORTHO05D005815 5.3e-84 314.7 191 83.2
Peaxi162Scf00709g00003 Petunia axillaris HOM05D004528 ORTHO05D005815 6.9e-84 314.3 198 80.8
vmacro17227 Vaccinium macrocarpon HOM05D004528 ORTHO05D005815 6.9e-84 314.3 222 73.4
Carub.0003s3385 Capsella rubella HOM05D004528 ORTHO05D005815 1.2e-83 313.5 191 81.2
Thhalv10022707m.g Eutrema salsugineum HOM05D004528 ORTHO05D005815 1.5e-83 313.2 191 81.7
Os09g0386400 Oryza sativa ssp. japonica HOM05D004528 ORTHO05D005815 3.4e-83 312.0 191 80.6
EL10Ac8g19227 Beta vulgaris HOM05D004528 ORTHO05D005815 4.5e-83 311.6 218 74.3
BcaB08g34873 Brassica carinata HOM05D004528 ORTHO05D005815 4.5e-83 311.6 191 81.7
Sp3g32930 Schrenkiella parvula HOM05D004528 ORTHO05D005815 5.8e-83 311.2 191 81.2
THA.LOC104820025 Tarenaya hassleriana HOM05D004528 ORTHO05D005815 7.6e-83 310.8 191 80.6
AL3G48690 Arabidopsis lyrata HOM05D004528 ORTHO05D005815 1.7e-82 309.7 191 80.6
Zm00001eb311810 Zea mays HOM05D004528 ORTHO05D005815 1.7e-82 309.7 191 80.1
Nitab4.5_0005634g0070 Nicotiana tabacum HOM05D004528 ORTHO05D005815 2.2e-82 309.3 197 80.7
SEGI_06455 Sequoiadendron giganteum HOM05D004528 ORTHO05D005815 6.4e-82 307.8 191 79.6
Aa31LG8G16570 Aethionema arabicum HOM05D004528 ORTHO05D005815 3.2e-81 305.4 191 79.6
HPP92_010493 Vanilla planifolia HOM05D004528 ORTHO05D005815 2.1e-80 302.8 192 77.1
AT2G19560 Arabidopsis thaliana HOM05D004528 ORTHO05D005815 6.0e-80 301.2 191 78.0
Mapoly0005s0151 Marchantia polymorpha HOM05D004528 ORTHO05D005815 2.5e-78 295.8 189 76.7
Sabra06G0171200 Salix brachista HOM05D004528 ORTHO05D005815 2.5e-78 295.8 262 62.6
unitig_748.g7306 Utricularia gibba HOM05D004528 ORTHO05D005815 2.5e-78 295.8 214 72.4
Actinidia25256 Actinidia chinensis HOM05D004528 ORTHO05D005815 2.1e-77 292.7 191 78.5
Cpa.g.sc283.9 Carica papaya HOM05D004528 ORTHO05D005815 4.8e-77 291.6 172 85.5
PSO832G3660 Papaver somniferum HOM05D004528 ORTHO05D005815 4.8e-77 291.6 191 76.4
PSO063G0639 Papaver somniferum HOM05D004528 ORTHO05D005815 4.0e-76 288.5 191 77.0
SHI24590 Sapria himalayana HOM05D004528 ORTHO05D005815 7.6e-75 284.3 191 75.4
BcaB04g16932 Brassica carinata HOM05D004528 ORTHO05D005815 2.2e-74 282.7 180 78.3
Pp3c17_12810 Physcomitrium patens HOM05D004528 ORTHO05D005815 4.9e-74 281.6 189 72.0
AagrBONN_evm.TU.Sc2ySwM_344.906 Anthoceros agrestis HOM05D004528 ORTHO05D005815 6.0e-72 274.6 191 69.6
SMO117G0048 Selaginella moellendorffii HOM05D004528 ORTHO05D005815 1.8e-71 273.1 191 69.6
Gohir.D06G070800 Gossypium hirsutum HOM05D004528 ORTHO05D005815 8.1e-69 264.2 156 85.9
Gohir.A06G072200 Gossypium hirsutum HOM05D004528 ORTHO05D005815 5.3e-68 261.5 160 82.5
CARHR051760 Cardamine hirsuta HOM05D004528 ORTHO05D005815 1.7e-66 256.5 201 64.2
Sc18g0002070 Simmondsia chinensis HOM05D004528 ORTHO05D005815 3.0e-63 245.7 156 79.5
CBR_g78884 Chara braunii HOM05D004528 ORTHO05D005815 4.1e-60 235.3 199 58.3
BcaB04g16933 Brassica carinata HOM05D004528 ORTHO05D005815 2.0e-59 233.0 182 65.9
A07p01200 Brassica napus HOM05D004528 ORTHO05D005815 5.0e-58 228.4 143 78.3
MELO3C004622.2 Cucumis melo HOM05D004528 ORTHO05D005815 1.1e-57 227.3 191 63.4
CARHR052830 Cardamine hirsuta HOM05D004528 ORTHO05D005815 1.9e-57 226.5 192 62.5
AUR62027494 Chenopodium quinoa HOM05D004528 ORTHO05D005815 7.2e-57 224.6 187 64.7
PGSC0003DMG400022053 Solanum tuberosum HOM05D004528 ORTHO05D005815 3.6e-56 222.2 143 77.6
BcaB03g16744 Brassica carinata HOM05D004528 ORTHO05D005815 2.5e-54 216.1 195 61.5
ATR0026G021 Amborella trichopoda HOM05D004528 ORTHO05D005815 8.2e-53 211.1 123 85.4
MCO16G315 Micromonas commoda HOM05D004528 ORTHO05D005815 1.8e-44 183.3 193 46.6
CDE02G2136 Ceratophyllum demersum HOM05D004528 ORTHO05D005815 1.2e-43 180.6 171 59.1
Cre02.g110400 Chlamydomonas reinhardtii HOM05D004528 ORTHO05D005815 1.2e-40 170.6 191 45.0
CARHR122310 Cardamine hirsuta HOM05D004528 ORTHO05D005815 3.3e-38 162.5 110 71.8
PRCOL_00001383 Prasinoderma coloniale HOM05D004528 ORTHO05D005815 1.7e-37 160.2 191 38.7
CARHR054270 Cardamine hirsuta HOM05D004528 ORTHO05D005815 3.5e-35 152.5 143 58.0
BcaB03g16690 Brassica carinata HOM05D004528 ORTHO05D005815 5.9e-35 151.8 107 70.1
Atru.chr7.1579 Acer truncatum HOM05D004528 ORTHO05D005815 1.2e-32 144.1 82 82.9
Ah.14g085220 Amaranthus hybridus HOM05D004528 ORTHO05D005815 8.2e-29 131.3 71 90.1
BcaB03g16691 Brassica carinata HOM05D004528 ORTHO05D005815 7.7e-27 124.8 88 68.2
RcHm_v2.0_Chr7g0206721 Rosa chinensis HOM05D004528 ORTHO05D005815 2.9e-26 122.9 115 59.1
HPP92_010492 Vanilla planifolia HOM05D004528 ORTHO05D005815 5.2e-23 112.1 69 75.4
BcaC03g15601 Brassica carinata HOM05D004528 ORTHO05D032255 8.6e-18 94.7 114 53.5
RcHm_v2.0_Chr7g0207111 Rosa chinensis HOM05D004528 ORTHO05D005815 8.6e-18 94.7 99 54.5
BolC2t09319H Brassica oleracea HOM05D004528 ORTHO05D032255 1.9e-17 93.6 143 42.7
C02p33900 Brassica napus HOM05D004528 ORTHO05D032255 1.8e-15 87.0 146 41.1
RcHm_v2.0_Chr7g0207281 Rosa chinensis HOM05D004528 ORTHO05D005815 9.8e-14 81.3 53 83.0
FAN23G1719 Fragaria x ananassa HOM05D004528 ORTHO05D005815 2.2e-13 80.1 43 86.0
Oeu018237.1 Olea europaea HOM05D004528 ORTHO05D005815 6.6e-10 68.6 40 77.5
RcHm_v2.0_Chr7g0230831 Rosa chinensis HOM05D004528 ORTHO05D005815 4.3e-09 65.9 38 84.2
CARHR054260 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.8e-08 63.2 43 69.8


User provided reference genes

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