Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29336_v3 Cicer arietinum L. HOM05D004852 ORTHO05D148012 1.5e-297 1025.4 516 100.0
Mapoly0216s0004 Marchantia polymorpha HOM05D004852 ORTHO05D006128 1.2e-12 79.0 336 24.7
AagrBONN_evm.TU.Sc2ySwM_228.1916 Anthoceros agrestis HOM05D004852 ORTHO05D006128 3.0e-11 74.3 332 23.2
SMO235G0070 Selaginella moellendorffii HOM05D004852 ORTHO05D006128 2.0e-10 71.6 317 22.7
HPP92_017010 Vanilla planifolia HOM05D004852 ORTHO05D006128 7.4e-10 69.7 286 23.4
HPP92_017090 Vanilla planifolia HOM05D004852 ORTHO05D006128 1.3e-09 68.9 317 24.0
Lj1g0003104 Lotus japonicus HOM05D004852 ORTHO05D006128 1.7e-09 68.6 219 26.5
CiPaw.05G012900 Carya illinoinensis HOM05D004852 ORTHO05D006128 4.8e-09 67.0 213 26.8
SMO347G0466 Selaginella moellendorffii HOM05D004852 ORTHO05D006128 6.3e-09 66.6 236 23.3
HPP92_016994 Vanilla planifolia HOM05D004852 ORTHO05D006128 6.3e-09 66.6 278 24.5
Sp2g09590 Schrenkiella parvula HOM05D004852 ORTHO05D006128 1.4e-08 65.5 284 25.0
Gohir.A13G044100 Gossypium hirsutum HOM05D004852 ORTHO05D006128 1.8e-08 65.1 203 27.1
CsaV3_7G008100 Cucumis sativus L. HOM05D004852 ORTHO05D006128 4.1e-08 63.9 199 27.1
Duzib205G0175 Durio zibethinus HOM05D004852 ORTHO05D006128 4.1e-08 63.9 248 25.0
Lj5A215G62 Lonicera japonica HOM05D004852 ORTHO05D006128 4.1e-08 63.9 210 24.3
TWI79G0830 Tripterygium wilfordii HOM05D004852 ORTHO05D006128 4.1e-08 63.9 210 26.7
Nn1g04670 Nelumbo nucifera HOM05D004852 ORTHO05D006128 5.3e-08 63.5 210 26.2
TPR.G21613 Trifolium pratense HOM05D004852 ORTHO05D006128 6.9e-08 63.2 285 23.2
Ca_24346_v3 Cicer arietinum L. HOM05D004852 ORTHO05D006128 9.1e-08 62.8 285 22.8
Medtr5g004960 Medicago truncatula HOM05D004852 ORTHO05D006128 9.1e-08 62.8 203 26.6
TAR376G0480 Trochodendron aralioides HOM05D004852 ORTHO05D006128 9.1e-08 62.8 285 23.2
Glyma.01G243900 Glycine max HOM05D004852 ORTHO05D006128 1.2e-07 62.4 203 26.1
BraA06t27566Z Brassica rapa HOM05D004852 ORTHO05D006128 2.0e-07 61.6 284 24.3
ClCG02G006490 Citrullus lanatus HOM05D004852 ORTHO05D006128 2.0e-07 61.6 216 24.1
Gohir.D13G043200 Gossypium hirsutum HOM05D004852 ORTHO05D006128 2.0e-07 61.6 203 27.1
Gorai.013G047900 Gossypium raimondii HOM05D004852 ORTHO05D006128 2.0e-07 61.6 203 27.1
Psat4g228520 Pisum sativum HOM05D004852 ORTHO05D006128 2.0e-07 61.6 212 26.4
Aa31LG9G8420 Aethionema arabicum HOM05D004852 ORTHO05D006128 2.6e-07 61.2 212 25.9
arahy.Tifrunner.gnm1.ann1.F6JX6R Arachis hypogaea HOM05D004852 ORTHO05D006128 2.6e-07 61.2 233 24.9
A06p46930 Brassica napus HOM05D004852 ORTHO05D006128 2.6e-07 61.2 284 24.3
MELO3C005497.2 Cucumis melo HOM05D004852 ORTHO05D006128 3.4e-07 60.8 199 25.6
Pp3c22_4740 Physcomitrium patens HOM05D004852 ORTHO05D006128 3.4e-07 60.8 212 22.6
PGR142G1976 Punica granatum HOM05D004852 ORTHO05D006128 3.4e-07 60.8 212 25.9
Solyc01g107510.3 Solanum lycopersicum HOM05D004852 ORTHO05D006128 3.4e-07 60.8 212 26.4
Ah.01g018340 Amaranthus hybridus HOM05D004852 ORTHO05D006128 4.5e-07 60.5 210 23.8
Dinv42201 Davidia involucrata HOM05D004852 ORTHO05D006128 4.5e-07 60.5 287 23.7
RcHm_v2.0_Chr6g0254741 Rosa chinensis HOM05D004852 ORTHO05D006128 4.5e-07 60.5 203 25.1
Sopen01g049730 Solanum pennellii HOM05D004852 ORTHO05D006128 4.5e-07 60.5 212 26.4
EL10Ac9g22261 Beta vulgaris HOM05D004852 ORTHO05D006128 5.9e-07 60.1 210 24.3
Hund06310 Selenicereus undatus HOM05D004852 ORTHO05D006128 5.9e-07 60.1 255 24.7
Prupe.8G136700 Prunus persica HOM05D004852 ORTHO05D006128 7.7e-07 59.7 203 24.6
Manes.07G069666 Manihot esculenta HOM05D004852 ORTHO05D006128 1.0e-06 59.3 278 21.9
Oeu044275.2 Olea europaea HOM05D004852 ORTHO05D006128 1.0e-06 59.3 214 27.6
BolC7t43304H Brassica oleracea HOM05D004852 ORTHO05D006128 1.3e-06 58.9 284 23.6
BcaNung06822 Brassica carinata HOM05D004852 ORTHO05D006128 2.2e-06 58.2 284 23.9
C07p27720 Brassica napus HOM05D004852 ORTHO05D006128 2.2e-06 58.2 284 23.9
CANSAT25G3392 Cannabis sativa HOM05D004852 ORTHO05D006128 2.2e-06 58.2 263 22.4
CAN.G606.8 Capsicum annuum HOM05D004852 ORTHO05D006128 2.2e-06 58.2 212 25.9
Aqoxy6G02842 Aquilegia oxysepala HOM05D004852 ORTHO05D006128 2.9e-06 57.8 217 25.8
Peaxi162Scf00016g02441 Petunia axillaris HOM05D004852 ORTHO05D006128 2.9e-06 57.8 212 24.1
Sabra09G0072700 Salix brachista HOM05D004852 ORTHO05D006128 2.9e-06 57.8 203 28.1
Thecc.02G110100 Theobroma cacao HOM05D004852 ORTHO05D006128 2.9e-06 57.8 201 27.4
CSS0042044 Camellia sinensis var. sinensis HOM05D004852 ORTHO05D006128 3.8e-06 57.4 235 25.5
Cc02_g19340 Coffea canephora HOM05D004852 ORTHO05D006128 3.8e-06 57.4 265 23.8
Lalb_Chr09g0319581 Lupinus albus HOM05D004852 ORTHO05D006128 3.8e-06 57.4 227 23.3
Nitab4.5_0001143g0010 Nicotiana tabacum HOM05D004852 ORTHO05D006128 3.8e-06 57.4 258 23.3
Potri.009G094400 Populus trichocarpa HOM05D004852 ORTHO05D006128 3.8e-06 57.4 203 28.1
Zm00001eb226110 Zea mays HOM05D004852 ORTHO05D006128 3.8e-06 57.4 214 24.8
Actinidia05501 Actinidia chinensis HOM05D004852 ORTHO05D006128 5.0e-06 57.0 203 25.1
arahy.Tifrunner.gnm1.ann1.9X93LG Arachis hypogaea HOM05D004852 ORTHO05D006128 5.0e-06 57.0 219 24.7
COL.COLO4_32578 Corchorus olitorius HOM05D004852 ORTHO05D006128 5.0e-06 57.0 203 24.6
FAN15G1156 Fragaria x ananassa HOM05D004852 ORTHO05D006128 5.0e-06 57.0 206 26.2
Thhalv10000766m.g Eutrema salsugineum HOM05D004852 ORTHO05D006128 8.5e-06 56.2 284 24.3
Phvul.002G053200 Phaseolus vulgaris HOM05D004852 ORTHO05D006128 8.5e-06 56.2 203 22.7


User provided reference genes

Program Settings